Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m02
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.5  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 395 RQPRFPYESYTKFDLVEEFLCNCGV 469
           R+ R PY  +   +L +EFL N  V
Sbjct: 244 RKKRKPYSKFQTLELEKEFLFNAYV 268


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 321 RNYGRTPFIILNTGKKYQIAQV*CHDSHVFH 413
           +NY   PF+  +  K     Q   H++ ++H
Sbjct: 17  QNYKTNPFLASDCDKNQNTEQNYTHNNEMYH 47


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 405 VFHMKAIPNLIW 440
           VFH+++ PN+ W
Sbjct: 189 VFHVESHPNITW 200


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 405 VFHMKAIPNLIW 440
           VFH+++ PN+ W
Sbjct: 189 VFHVESHPNITW 200


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +3

Query: 321 RNYGRTPFIILNTGKKYQIAQV*CHDSHVFH 413
           +NY   PF+  +  K     Q   H++ ++H
Sbjct: 17  QNYKTNPFLASDCDKNQNTEQNYTHNNEMYH 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,911
Number of Sequences: 336
Number of extensions: 3898
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)