Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2m02
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100663-2|AAC68981.2|  532|Caenorhabditis elegans Udp-glucurono...    31   1.1  
U88311-4|AAB42344.1|  537|Caenorhabditis elegans Udp-glucuronosy...    30   1.4  
AC024799-5|AAO25979.1|  474|Caenorhabditis elegans Hypothetical ...    29   2.5  
AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical ...    29   2.5  
U88311-2|AAB42350.2|  529|Caenorhabditis elegans Udp-glucuronosy...    29   3.3  
AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF026206-5|AAK39307.1|  141|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z29094-11|CAI06056.1|  235|Caenorhabditis elegans Hypothetical p...    28   7.6  
AL132895-1|CAC14399.1|  601|Caenorhabditis elegans Hypothetical ...    28   7.6  

>AF100663-2|AAC68981.2|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein19 protein.
          Length = 532

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 347 NPEYRKKIPNCPSMMSRQPRFPYESYTKF 433
           NPEYRK       M+  QP  P E++ K+
Sbjct: 435 NPEYRKSAERVAEMLRNQPTNPKETFLKY 463


>U88311-4|AAB42344.1|  537|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein28 protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/52 (23%), Positives = 25/52 (48%)
 Frame = +2

Query: 278 IAFNSSTPRNIRNEKKLWTHAIYNPEYRKKIPNCPSMMSRQPRFPYESYTKF 433
           I  + ++  N++  +K  T  +Y+  Y+K       ++  QP  P E+  K+
Sbjct: 417 IYLHKNSMENVKVTRKALTDVLYDESYKKNAEKLTDILMNQPYSPMENVIKY 468


>AC024799-5|AAO25979.1|  474|Caenorhabditis elegans Hypothetical
           protein Y49C4A.8b protein.
          Length = 474

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/52 (21%), Positives = 27/52 (51%)
 Frame = +2

Query: 278 IAFNSSTPRNIRNEKKLWTHAIYNPEYRKKIPNCPSMMSRQPRFPYESYTKF 433
           I  + ++  N++  +K +T  +++  Y+K      +++  QP  P E+  K+
Sbjct: 417 IYLHKNSMENVKVTRKAFTDVLFDDSYQKNAEKLANILMNQPYSPKENVIKY 468


>AC024799-4|AAK72318.1|  536|Caenorhabditis elegans Hypothetical
           protein Y49C4A.8a protein.
          Length = 536

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/52 (21%), Positives = 27/52 (51%)
 Frame = +2

Query: 278 IAFNSSTPRNIRNEKKLWTHAIYNPEYRKKIPNCPSMMSRQPRFPYESYTKF 433
           I  + ++  N++  +K +T  +++  Y+K      +++  QP  P E+  K+
Sbjct: 417 IYLHKNSMENVKVTRKAFTDVLFDDSYQKNAEKLANILMNQPYSPKENVIKY 468


>U88311-2|AAB42350.2|  529|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein26 protein.
          Length = 529

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +2

Query: 305 NIRNEKKLWTHAIYNPEYRKKIPNCPSMMSRQPRFPYESYTKF 433
           N++  KK     +YN +Y +       M+  QP+ P E+  ++
Sbjct: 426 NVQRVKKAVHDILYNKQYTESAERIAEMIKNQPKTPKETVVRY 468


>AL021482-2|CAA16339.1| 1003|Caenorhabditis elegans Hypothetical
           protein Y39A1B.2 protein.
          Length = 1003

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 401 AVVTSYLGNLVFFSCIQDYKWRASIISFHCEYF 303
           AV+ +Y+  L FF+ +  Y  R  I + HC +F
Sbjct: 432 AVIFTYIYQLTFFAAVMVYTNRREINNRHCIFF 464


>AF026206-5|AAK39307.1|  141|Caenorhabditis elegans Hypothetical
           protein T28B4.3 protein.
          Length = 141

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +2

Query: 416 ESYTKFDLVEEFLCNCGVDNVCTCSMK--TELVDSVKCQGKIPKRIFKGLTLQSAVS 580
           + YT  D+      +C  D +  C  K   ++ DS    GK+PK+++    +Q A S
Sbjct: 76  KEYTPIDVKLNIYHDCN-DGIKPCQRKFGIKIPDSYTSSGKVPKKVYDAGVIQLAGS 131


>Z29094-11|CAI06056.1|  235|Caenorhabditis elegans Hypothetical
           protein C07A9.12 protein.
          Length = 235

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/65 (23%), Positives = 26/65 (40%)
 Frame = +2

Query: 287 NSSTPRNIRNEKKLWTHAIYNPEYRKKIPNCPSMMSRQPRFPYESYTKFDLVEEFLCNCG 466
           +SS P +  N K  W  + Y P+    +     +  + P+F    +      +E +  C 
Sbjct: 112 DSSEPISFGNRKYFWGESKYVPDEELPVQCINKIDPQDPQFGKVFFDNESRPQEIVYACP 171

Query: 467 VDNVC 481
            DN C
Sbjct: 172 ADNNC 176


>AL132895-1|CAC14399.1|  601|Caenorhabditis elegans Hypothetical
           protein Y59A8A.1 protein.
          Length = 601

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 374 NCPSMMSRQPRFPYESYTKFDLVEEFLCNC 463
           N P M+ R P  P ++ T   L+E  L  C
Sbjct: 289 NAPYMVERDPNAPIQTLTNRQLIETALAKC 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,339,871
Number of Sequences: 27780
Number of extensions: 359939
Number of successful extensions: 907
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)