Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2m01
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78546-3|CAB01768.2| 361|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF078787-9|AAK82921.1| 183|Caenorhabditis elegans Hypothetical ... 29 4.3
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 5.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 5.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 5.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 5.7
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 5.7
AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 7.6
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 7.6
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 28 7.6
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 28 7.6
>Z78546-3|CAB01768.2| 361|Caenorhabditis elegans Hypothetical
protein T21H8.2 protein.
Length = 361
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -1
Query: 196 YIQFSATNK*YHSNLVLTHNL*ISIIVM---HNDFVKHKLFFYI 74
YI FS+T + S L LTH + I+ HN F+ L++Y+
Sbjct: 258 YIIFSSTGRFLRSVLSLTHYKQFASIIFVMPHNAFISMTLYYYL 301
>AF078787-9|AAK82921.1| 183|Caenorhabditis elegans Hypothetical
protein T17A3.9 protein.
Length = 183
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 496 VTLITGLFSSAKSLPIPLKFCDTLLDNWTSEELQRNK 386
++L G A PIP F T+ NWT ++LQ +
Sbjct: 31 ISLSLGTSQVANVCPIPASFNKTVDTNWTVDQLQEGQ 67
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 SQNFNGIGRDFAE-ENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSS 572
S N GIG A+ EN+P I +PK R++ K + + I T S
Sbjct: 2185 SFNGKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNINGTDS 2232
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 SQNFNGIGRDFAE-ENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSS 572
S N GIG A+ EN+P I +PK R++ K + + I T S
Sbjct: 2714 SFNGKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNINGTDS 2761
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 SQNFNGIGRDFAE-ENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSS 572
S N GIG A+ EN+P I +PK R++ K + + I T S
Sbjct: 2395 SFNGKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNINGTDS 2442
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 SQNFNGIGRDFAE-ENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSS 572
S N GIG A+ EN+P I +PK R++ K + + I T S
Sbjct: 2185 SFNGKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNINGTDS 2232
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 SQNFNGIGRDFAE-ENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSS 572
S N GIG A+ EN+P I +PK R++ K + + I T S
Sbjct: 2714 SFNGKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNINGTDS 2761
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 SQNFNGIGRDFAE-ENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSS 572
S N GIG A+ EN+P I +PK R++ K + + I T S
Sbjct: 2395 SFNGKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNINGTDS 2442
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 432 SQNFNGIGRDFAE-ENKPVIKVTVIPKHDRQRPNKQRLKSKTIKNTSS 572
S N GIG A+ EN+P I +PK R++ K + + I T S
Sbjct: 1604 SFNGKGIGESKAQIENEPYISRFALPKALRKQSGKYTITATNINGTDS 1651
>AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical
protein C16C4.7 protein.
Length = 361
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 702 CFFGIFRRKIRALCCFP 652
CF+G FRR+IR + FP
Sbjct: 288 CFYGEFRRQIRGISLFP 304
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 414 QLSSKVSQNFNGIGRDFAEE-NKPVIKVTVIPKHDR 518
Q + +V + N +F EE NKP IK+ VIP+ ++
Sbjct: 1319 QTAEEVLRGKNTYRFEFVEEQNKPFIKIWVIPREEK 1354
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical protein
F02E9.4a protein.
Length = 1505
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 414 QLSSKVSQNFNGIGRDFAEE-NKPVIKVTVIPKHDR 518
Q + +V + N +F EE NKP IK+ VIP+ ++
Sbjct: 1317 QTAEEVLRGKNTYRFEFVEEQNKPFIKIWVIPREEK 1352
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1
Query: 490 LITGLFSSAKSLPIPLKFCDTLLDNWTSEELQRNKE 383
LI GLF+ K + P+ LDN TS E++RNKE
Sbjct: 605 LIVGLFT--KYIFEPIWMAVVSLDNKTSFEIRRNKE 638
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1
Query: 490 LITGLFSSAKSLPIPLKFCDTLLDNWTSEELQRNKE 383
LI GLF+ K + P+ LDN TS E++RNKE
Sbjct: 605 LIVGLFT--KYIFEPIWMAVVSLDNKTSFEIRRNKE 638
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,869,854
Number of Sequences: 27780
Number of extensions: 285682
Number of successful extensions: 676
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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