Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2l22
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006834-5|AAF40007.1|  451|Caenorhabditis elegans Hypothetical ...    33   0.26 
Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical ...    28   7.4  
AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical ...    28   7.4  
AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical...    28   7.4  
U28736-2|AAA68307.1|  620|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AC024090-4|AAK67221.1|  300|Caenorhabditis elegans Hypothetical ...    27   9.8  

>AC006834-5|AAF40007.1|  451|Caenorhabditis elegans Hypothetical
           protein ZK973.3 protein.
          Length = 451

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = +3

Query: 135 FSQLSCRYGNLFKHRKQNSLKDKHVKGKESASAACET--QVCRESLEECLKNFDKNVLAE 308
           FS       N FK R+   + + H + K++A+A   T  +  + + E C K+  +N L  
Sbjct: 116 FSSSDGHLPNAFKGRETQHIAEYHKQFKKNANAYTGTVREALKLAFETCDKDLAENALPS 175

Query: 309 MRSVDLRSLATIAAS 353
            + V  R  A +AAS
Sbjct: 176 AKGVIDRHAAMVAAS 190


>Z93374-5|CAB07557.1|  935|Caenorhabditis elegans Hypothetical
           protein C06C6.7 protein.
          Length = 935

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = +3

Query: 177 RKQNSLKDKHVKGKESASAACETQVCRESLEECLKNFDKNVLAEMRSVDLRSLATIAASS 356
           RK  S +    K KE +SA  ++     SL +  + + K+  + M   DL+ L  +   S
Sbjct: 545 RKLKSDRKLVEKFKEVSSAVSKSLPLLVSLRKIAEEYKKDNSSGM--TDLKKLKPLQGLS 602

Query: 357 RRSLNDFGGVTSCRKVSYTSSESFEKN 437
           +   +  G + S  KVS +  E+F +N
Sbjct: 603 KPFGDAVGALVSITKVSRSELETFVRN 629


>Z81466-6|CAB03870.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
 Frame = +3

Query: 165 LFKHRKQ-NSLKDKHVKGKESASAACETQVCRESLEECL--KNFDKNVLAEMRSVDLRSL 335
           + + +KQ  S K + V GK       + ++ R  +EE L  K FDK+ +A+  +++ +SL
Sbjct: 133 IVRQKKQLESKKSQKVDGKSKEER--DRKIAR-LVEEILGLKTFDKDSVAKFAALNTKSL 189

Query: 336 ATIAASSRRSLND-FGGVTSCRKVSYTSSESFEKNRNGWSDTPSVTVELRGK 488
           A +  + +  + +       C+ +     +S  +    W+ T +  ++  G+
Sbjct: 190 AELKINGKTEVAERLMYKLVCQSIIVEKIQSIREKYTEWNKTAAFFMQRLGQ 241


>Z75536-5|CAA99833.1|  545|Caenorhabditis elegans Hypothetical
           protein F18C12.3 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
 Frame = +3

Query: 165 LFKHRKQ-NSLKDKHVKGKESASAACETQVCRESLEECL--KNFDKNVLAEMRSVDLRSL 335
           + + +KQ  S K + V GK       + ++ R  +EE L  K FDK+ +A+  +++ +SL
Sbjct: 133 IVRQKKQLESKKSQKVDGKSKEER--DRKIAR-LVEEILGLKTFDKDSVAKFAALNTKSL 189

Query: 336 ATIAASSRRSLND-FGGVTSCRKVSYTSSESFEKNRNGWSDTPSVTVELRGK 488
           A +  + +  + +       C+ +     +S  +    W+ T +  ++  G+
Sbjct: 190 AELKINGKTEVAERLMYKLVCQSIIVEKIQSIREKYTEWNKTAAFFMQRLGQ 241


>U58746-8|AAB00629.1|  339|Caenorhabditis elegans Hypothetical
           protein R05G6.2 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
 Frame = +1

Query: 454 ILLVLQWSYEGKTHDLTSP----ITLFAYYVKTQKVHSSTTFK*EDLRRIE--ASVQI*K 615
           I++ + W  +G  H    P    IT   Y  +  +V   T  K E L  +   A   + K
Sbjct: 191 IMICVWWGVQGPVHWELLPTNKTITADYYCAQLDRVAEKTNGKYEKLYFLHDNARPHVAK 250

Query: 616 EIRTWLIDYGWLQRVQQRKHPPLNPEVAP 702
           +    L D GW        HPP +P++AP
Sbjct: 251 KTFQKLQDLGWTVL----PHPPYSPDLAP 275


>AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical
           protein F53G2.1 protein.
          Length = 714

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +1

Query: 373 ILAVLHLVEKCLTL-QVNLL-RKTGMVGVILLVLQWSYEGKTHDLTSPITLFAYYV 534
           +L VLH+    +T  Q++L   K   +  + L L WS   K H+LT  I    +Y+
Sbjct: 457 VLTVLHMCTTIMTQDQLSLFAEKRPHMLQLFLALNWSLNKKEHNLTRCIMHIIHYL 512


>AC024800-4|AAF60722.1|  514|Caenorhabditis elegans Hypothetical
           protein Y49F6A.4 protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
 Frame = +1

Query: 454 ILLVLQWSYEGKTHDLTSP----ITLFAYYVKTQKVHSSTTFK*EDLRRIE--ASVQI*K 615
           I++ + W  +G  H    P    IT   Y  +  +V   T  K E L  +   A   + K
Sbjct: 166 IMICVWWGVQGPVHWELLPTNKTITADYYCAQLDRVAEKTNGKYEKLYFLHDNARPHVAK 225

Query: 616 EIRTWLIDYGWLQRVQQRKHPPLNPEVAP 702
           +    L D GW        HPP +P++AP
Sbjct: 226 KTFQKLQDLGWTVL----PHPPYSPDLAP 250


>AC006769-12|AAF60591.1|  384|Caenorhabditis elegans Hypothetical
           protein Y45G12C.13 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
 Frame = +1

Query: 454 ILLVLQWSYEGKTHDLTSP----ITLFAYYVKTQKVHSSTTFK*EDLRRIE--ASVQI*K 615
           I++ + W  +G  H    P    IT   Y  +  +V   T  K E L  +   A   + K
Sbjct: 191 IMICVWWGVQGPVHWELLPTNKTITADYYCAQLDRVAEKTNGKYEKLYFLHDNARPHVAK 250

Query: 616 EIRTWLIDYGWLQRVQQRKHPPLNPEVAP 702
           +    L D GW        HPP +P++AP
Sbjct: 251 KTFQKLQDLGWTVL----PHPPYSPDLAP 275


>U28736-2|AAA68307.1|  620|Caenorhabditis elegans Hypothetical
           protein F26A10.2 protein.
          Length = 620

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 363 SLNDFGGVTSCRKVSYTSSESFEKNRNGWSD 455
           S+ DF   TS  ++  +SSE F+ +   W +
Sbjct: 545 SMKDFSSQTSSSQIVVSSSECFDNDNRSWKN 575


>AC024090-4|AAK67221.1|  300|Caenorhabditis elegans Hypothetical
           protein C52E2.7 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 168 FKHRKQNSLKDKHVKGKESASAACETQVCRESLEECLKNFD 290
           ++  K+ S+ D+ + G++S +   E   C E L EC+   D
Sbjct: 146 YRDAKEISIADRAIFGEQSRALFSENLDCLEFLAECVIGLD 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,356,016
Number of Sequences: 27780
Number of extensions: 300321
Number of successful extensions: 802
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)