Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2l17
         (292 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q18WI9 Cluster: Trimethylamine methyltransferase; n=2; ...    34   0.69 
UniRef50_A2FHZ9 Cluster: Beige/BEACH domain containing protein; ...    33   0.92 
UniRef50_UPI0000E4A1D5 Cluster: PREDICTED: similar to Platelet-a...    32   2.1  
UniRef50_UPI0000498467 Cluster: conserved hypothetical protein; ...    32   2.8  
UniRef50_Q54GN9 Cluster: C2H2 type Zn finger-containing protein;...    31   3.7  
UniRef50_Q6BLS9 Cluster: Similar to ca|CA1081|IPF14797.3 Candida...    30   8.5  

>UniRef50_Q18WI9 Cluster: Trimethylamine methyltransferase; n=2;
           Desulfitobacterium hafniense|Rep: Trimethylamine
           methyltransferase - Desulfitobacterium hafniense (strain
           DCB-2)
          Length = 468

 Score = 33.9 bits (74), Expect = 0.69
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +1

Query: 88  FTSQLSNGKRITKIEDIIDMQKGEGHFNVRQVAFHLPPENEQVSSSACTEKSLESSIYKL 267
           F   + NG+R+ K++D I++ K E   N   +  H+P E + V       +SLE     L
Sbjct: 97  FVMDMDNGRRLAKLQDFINLCKLEHKMNNIDIMSHIPCEPQDVDPEM---RSLEMVYQTL 153

Query: 268 K 270
           K
Sbjct: 154 K 154


>UniRef50_A2FHZ9 Cluster: Beige/BEACH domain containing protein; n=1;
            Trichomonas vaginalis G3|Rep: Beige/BEACH domain
            containing protein - Trichomonas vaginalis G3
          Length = 2803

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
 Frame = +1

Query: 25   NHLEFKTKLCK---KNYLNLTDMDFTSQLSNGKRITKIEDIIDMQKGEGHFNVRQVAFHL 195
            N+L+F   LC      Y N     FTS   N + ++K+   + +   +   N RQ+ F +
Sbjct: 1808 NYLDFDLILCAFLIPYYYNKVFEHFTSLNLNSQEVSKLLPFLSLINTKCEDNSRQMIFKI 1867

Query: 196  PPENEQVSSSACTE 237
            P +N ++SS +  E
Sbjct: 1868 PVKNMKLSSFSALE 1881


>UniRef50_UPI0000E4A1D5 Cluster: PREDICTED: similar to
            Platelet-activating factor acetylhydrolase 2; n=4;
            Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
            Platelet-activating factor acetylhydrolase 2 -
            Strongylocentrotus purpuratus
          Length = 2400

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +1

Query: 103  SNGKRITKIEDIIDMQKGEGHFNVRQVAFHLPPENEQVSSSACTEKSLESSIY 261
            SNG     I  IID  K     N+R     LPP + Q SSS+      ++S++
Sbjct: 1152 SNGDPFQSISSIIDSNKARATPNIRDNFLGLPPYSIQSSSSSSVPVMEQNSVF 1204


>UniRef50_UPI0000498467 Cluster: conserved hypothetical protein;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
           hypothetical protein - Entamoeba histolytica HM-1:IMSS
          Length = 333

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
 Frame = +1

Query: 40  KTKL-CKKNYLNLTDMDFTSQLSNGKRITKIEDIIDMQKGEGHFNVRQVAFHLPPE-NEQ 213
           K KL  +K  +  TD DF +Q+   +   K E    ++K E H  +       P + N++
Sbjct: 14  KNKLIAEKKKVVFTDADF-NQMKPKRLSLKKEFPKKLKKSEKHIKLTHKETQKPNKVNQE 72

Query: 214 VSSSACTEKSLESSIYKLK 270
           ++   C+ KSLE S Y+LK
Sbjct: 73  IAIVGCS-KSLEKSYYRLK 90


>UniRef50_Q54GN9 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 402

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = +1

Query: 130 EDIIDMQKGEGH-FNVRQVAFHLPPENEQVSSSAC----TEKSLESSIYKLKCRTSKKK 291
           E+  D  K E H FN+++ AF LPP NEQ   +       E+S   +  K +CR   K+
Sbjct: 23  EEQRDHYKSELHRFNLKRKAFDLPPVNEQTFKNKVEALKQEESKSKTPAKFECRICDKE 81


>UniRef50_Q6BLS9 Cluster: Similar to ca|CA1081|IPF14797.3 Candida
           albicans IPF14797.3 unknown function; n=1; Debaryomyces
           hansenii|Rep: Similar to ca|CA1081|IPF14797.3 Candida
           albicans IPF14797.3 unknown function - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 377

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +1

Query: 64  YLNLTDMDFTSQLSNGKRITKIEDIIDMQKGEGHFNVRQV-AFHLPPENEQVSSSACTEK 240
           + NL   D T+++S+   +TK+ED+I+      H  V+ + AF L  E   +    C++ 
Sbjct: 232 FRNLNSNDSTTEVSSMADLTKLEDLINYLNFLNHLKVQVIDAFELTKE-RLIKFGWCSDD 290

Query: 241 SLES 252
            L +
Sbjct: 291 DLNN 294


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,835,121
Number of Sequences: 1657284
Number of extensions: 3943043
Number of successful extensions: 11530
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11529
length of database: 575,637,011
effective HSP length: 74
effective length of database: 452,997,995
effective search space used: 9965955890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)