Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2l17
(292 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 25 3.0
SPAC23H4.09 |cdb4||curved DNA-binding protein Cdb4|Schizosacchar... 24 3.9
SPBC3H7.15 |hhp1||serine/threonine protein kinase Hhp1|Schizosac... 24 5.2
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 23 6.9
SPAC186.06 |||human MAWBP homolog|Schizosaccharomyces pombe|chr ... 23 6.9
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 23 9.1
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 23 9.1
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 23 9.1
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 23 9.1
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 23 9.1
SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|... 23 9.1
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 24.6 bits (51), Expect = 3.0
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 25 NHLEFKTKLCKKNYLNLTDMDFTSQLSNGKRITKIEDIIDMQKGEGHFNVRQVAF 189
NHL + L ++ +++ + +NG+ + + ED+ + G VR+V+F
Sbjct: 313 NHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGI-VREVSF 366
>SPAC23H4.09 |cdb4||curved DNA-binding protein
Cdb4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 24.2 bits (50), Expect = 3.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 98 NYQMVNVLQKLKISLICKRVKGILMY 175
N+Q+ +++ K+ S CK V G+L +
Sbjct: 165 NWQVTDIVDKIATSYGCKPVAGMLSH 190
>SPBC3H7.15 |hhp1||serine/threonine protein kinase
Hhp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 210 FIFWG*MKSDLPYIKMPFTLLHINDIFNFCN 118
F+ W ++ D + M + D+FNFCN
Sbjct: 69 FVRWFGVECDYNAMVMDLLGPSLEDLFNFCN 99
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 23.4 bits (48), Expect = 6.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 52 CKKNYLNLTDMDFTSQLSN 108
C+KN + TD+ TS+L+N
Sbjct: 69 CEKNNVKRTDIFLTSKLAN 87
>SPAC186.06 |||human MAWBP homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 184
Score = 23.4 bits (48), Expect = 6.9
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 167 KCPSPFCISMISSIFVIRLPFDN*DVKSISVKFK*FF 57
+C +PFC+ + +I+LP + DV +++ F+ F
Sbjct: 40 QCNTPFCVDVGPRNAIIQLP-NGADVLNLNPNFQAIF 75
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/39 (25%), Positives = 16/39 (41%)
Frame = +1
Query: 55 KKNYLNLTDMDFTSQLSNGKRITKIEDIIDMQKGEGHFN 171
K L L + NG + + +I + G G+FN
Sbjct: 57 KSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGYFN 95
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 139 IDMQKGEGHFNVRQVAFHLPPENEQVSSSACTEKSL 246
I+ GEG F +A HL + V S+C ++++
Sbjct: 33 IESVVGEGSFGKVYLAAHLLTNTKVVLKSSCRKQAI 68
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 23.0 bits (47), Expect = 9.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 112 KRITKIEDIIDMQKGEGHFNVRQVAFHLP 198
K++ K +DI+ G G +V+ VA LP
Sbjct: 657 KKLPKDKDIVITISGRGDKDVQSVAEQLP 685
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 23.0 bits (47), Expect = 9.1
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +2
Query: 2 VSFLKCH-KTILNLKQNFAKK 61
V FL H KTI N+ NF+KK
Sbjct: 683 VDFLLKHSKTIENVSSNFSKK 703
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 23.0 bits (47), Expect = 9.1
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 43 TKLCKKNYLNLTDMDFTSQLSNGKR--ITKIEDIIDMQKGEGHFNVRQVAFHLPPENEQV 216
T L ++N N+T SQ G+R + K D + ++ G + FH+ P N +
Sbjct: 496 TILEQENAANVT----RSQAQEGRRTDMQKGNDR-EFRQYSGEQRYERCGFHITPCNSEE 550
Query: 217 SSSACTEKSLESSIYKLKCRTS 282
+ + + +S I ++ RTS
Sbjct: 551 EARSYFKDGTDSLITNIQIRTS 572
>SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 397
Score = 23.0 bits (47), Expect = 9.1
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 89 LRLNYQMVNVLQKLKISLICKRVKGILMYGK--SLFIYP 199
LR+++ +KL S+ ++ KGI +GK S+F+ P
Sbjct: 113 LRVSHLQEKWRKKLMKSIANRKAKGISNWGKKYSMFLLP 151
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,105,360
Number of Sequences: 5004
Number of extensions: 19145
Number of successful extensions: 58
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 69775820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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