Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2l16
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022985-8|AAB69966.1|  354|Caenorhabditis elegans Hypothetical ...    31   1.2  
U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF016431-2|AAC24249.2|  148|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z81054-4|CAB02885.3|  321|Caenorhabditis elegans Hypothetical pr...    29   2.7  
L02877-1|AAA50614.1|  321|Caenorhabditis elegans homeoprotein pr...    29   2.7  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    29   4.8  
AC006808-4|AAF60815.3|  397|Caenorhabditis elegans Hypothetical ...    29   4.8  
AC006808-3|AAT68889.1|  433|Caenorhabditis elegans Hypothetical ...    29   4.8  

>AF022985-8|AAB69966.1|  354|Caenorhabditis elegans Hypothetical
           protein T15B7.13 protein.
          Length = 354

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 185 VTLFNPSYCLDYLLLEFLWHFALVDFLLVLNRHT 84
           VT+F+  Y +DY +    W F  ++ LL  N  T
Sbjct: 283 VTIFSAVYMIDYYMFVKKWTFQFIEILLTFNAST 316


>U00050-8|AAM22062.1|  363|Caenorhabditis elegans Hypothetical
           protein F09F7.4b protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 539 KNLI**QDSFV*IEMKIVRAMLHEDGDEWLVNLSAKINNINPVIDRIMEDESVEGVIMT 715
           KNL   +DSF    ++ + A L +DG +W    +A +  ++P   ++   +  EG  M+
Sbjct: 239 KNLAQIRDSFKAKSVEEILASLEKDGSDWAKKQAATLGKMSPTSLKVTHRQITEGSKMS 297


>U00050-7|AAA50696.1|  386|Caenorhabditis elegans Hypothetical
           protein F09F7.4a protein.
          Length = 386

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 539 KNLI**QDSFV*IEMKIVRAMLHEDGDEWLVNLSAKINNINPVIDRIMEDESVEGVIMT 715
           KNL   +DSF    ++ + A L +DG +W    +A +  ++P   ++   +  EG  M+
Sbjct: 262 KNLAQIRDSFKAKSVEEILASLEKDGSDWAKKQAATLGKMSPTSLKVTHRQITEGSKMS 320


>AF016431-2|AAC24249.2|  148|Caenorhabditis elegans Hypothetical
           protein C10B5.3 protein.
          Length = 148

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +3

Query: 282 LNASMQRAVTEIMVGRALLLDTTKLVFCLPNSPERSRTLPMTLTTNRISKTRWSRIE 452
           ++  +QRA+ E+   R LL DT +    +    E+ +T+  T T+   S+   SR+E
Sbjct: 75  MDEEIQRALRELTESRELL-DTPRNSVFVEEKHEKQKTVTTTTTSTETSRNTSSRVE 130


>Z81054-4|CAB02885.3|  321|Caenorhabditis elegans Hypothetical
           protein F01D4.6a protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
 Frame = +1

Query: 202 CICQKTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLL-KSWWDEHYCLIPQSSYFVYRIH 378
           C C   Q    +  +   RSY E C + T +C  PL  K +W        Q  Y  + IH
Sbjct: 29  CNCCNEQIYDRYIYRMDNRSYHENCVKCT-ICESPLAEKCFWKNGRIYCSQHYYKDHSIH 87


>L02877-1|AAA50614.1|  321|Caenorhabditis elegans homeoprotein
           protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
 Frame = +1

Query: 202 CICQKTQSKCTHCQKRSRRSYAETCHRSTRVCNEPLL-KSWWDEHYCLIPQSSYFVYRIH 378
           C C   Q    +  +   RSY E C + T +C  PL  K +W        Q  Y  + IH
Sbjct: 29  CNCCNEQIYDRYIYRMDNRSYHENCVKCT-ICESPLAEKCFWKNGRIYCSQHYYKDHSIH 87


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 366 LPNSPERSRTLPMTLTTNRISKTRWSRIESKRKHQ 470
           L N P  S T   + +T  +S +R S+I  K+ HQ
Sbjct: 202 LGNQPSTSNTSEPSTSTQGVSPSRTSKISKKKAHQ 236


>AC006808-4|AAF60815.3|  397|Caenorhabditis elegans Hypothetical
           protein Y58G8A.4a protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 498 KSRSDATKTSDVFVSILYATNVSSISCWLLMSL 400
           K RSDAT        IL A  V+ I CWL ++L
Sbjct: 272 KQRSDATSRKKKVNYILIAMVVTFIGCWLPLTL 304


>AC006808-3|AAT68889.1|  433|Caenorhabditis elegans Hypothetical
           protein Y58G8A.4b protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 498 KSRSDATKTSDVFVSILYATNVSSISCWLLMSL 400
           K RSDAT        IL A  V+ I CWL ++L
Sbjct: 272 KQRSDATSRKKKVNYILIAMVVTFIGCWLPLTL 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,983,555
Number of Sequences: 27780
Number of extensions: 362428
Number of successful extensions: 1083
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)