Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2l07
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 1.2
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 28 1.6
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 27 2.1
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.1
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 27 2.8
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 27 3.7
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 3.7
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 26 6.4
SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr 2|... 26 6.4
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 26 6.4
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 26 6.4
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 25 8.5
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 25 8.5
>SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 330
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -3
Query: 570 GFCLDIFVSPCCRSGEGLDLAVSEFLLDCFKS----STESAPINGVILFVVPSCF 418
G C D +P GL L + E L+DCF + +TE IN + +PS F
Sbjct: 134 GLCYDS-CTPLANLAVGLSLNIQEVLIDCFATAACFTTEDTSINPIP--TLPSVF 185
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +2
Query: 404 KSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPV 583
K + TT+ +T + ++ +S NSE+A +S + +R T + + PV+ V
Sbjct: 980 KPESSLSSSTTSGLTS--SSSTIPSSTRSESNSESASTSSASKRSSSSTSLVQSNPVKTV 1037
Query: 584 L 586
+
Sbjct: 1038 V 1038
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 455 IGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKP-VQPVLKKSPLDMKLMEAMSL 631
I + VE L QSN N +++K + E HG+ ++ P P + P + S
Sbjct: 319 ITMVGVEPLYQSNGNEKSSKYNVFSESAHGNHQVLSFSPGSSPSFIEQPSPISPTSTTSE 378
Query: 632 DEFAITEKVD 661
D + E D
Sbjct: 379 DTNTLEEDTD 388
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQK-PV 574
++ +KGE + K + DLK SN + ET+ S S + ++ +K + P
Sbjct: 107 RKHAKGEGKRSKNRKRSSKHSEKQAVDLKSSNSSQETSSSKGSVNNKSERSREAKSRMPK 166
Query: 575 QPVLKKSPLDMKLMEAMS 628
K LD+ ++ S
Sbjct: 167 NSKEIKKGLDLSKLDMTS 184
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.1
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQ-SNKNSETAKSSPSPERQHGDTKISKQK-P 571
+QK K K+D N+ TP + +E +K+ +++K P + G KI ++
Sbjct: 49 RQKQKNTKKDTLVNRETPSKKSQKLETSDALKSKSKDSSKKEPVVVPKKGTPKIFQENHK 108
Query: 572 VQPVLKKSPLDMKLM 616
V+ V KSP KL+
Sbjct: 109 VKKV--KSPKKEKLV 121
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 552 KYLNKNLFSLFSK 590
KYLN NLF+LFSK
Sbjct: 624 KYLNPNLFALFSK 636
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 311 ICHDCLQQVSTLHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQS 490
+ + C T + + +KT F +F+K K ++++G K+ + + + + L S
Sbjct: 138 VFNSCSPPKPTNPITIIDNDKTHSFKKFYKSLVKEDEENGIEKKINEAMNSSASQPLPNS 197
Query: 491 -NKNSETAKSSP 523
N S T S P
Sbjct: 198 TNFASTTFPSVP 209
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 455 IGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDM 607
+G L E + ++ N + ++S P+R+H K SK K P+D+
Sbjct: 1285 LGILKTE--RDTSTNRKQGQASKQPQRRHRKEKDSKVSESTAEFKSLPIDI 1333
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 455 IGALSVEDLKQSNKNSETAK 514
+ A+SV+DLK+ NKN + K
Sbjct: 81 VDAMSVDDLKKLNKNKKLVK 100
>SPBC12C2.08 |dnm1||dynamin Dnm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 269 FDITVRADDNLPKAICHDCLQQV 337
FDI V+ NL A CH C++ V
Sbjct: 443 FDILVKPQLNLLAAPCHQCVELV 465
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 455 IGALSVEDLKQSNKNSETAK 514
+ A+SV+DLK+ NKN + K
Sbjct: 81 VDAMSVDDLKKLNKNKKLVK 100
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +2
Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQ 565
K K K +G NK+T S S + + S ER+H D+ S Q
Sbjct: 292 KDKKPSHKSNGRPNKLTAFFNKNSKASSISSAEEHPSNIDDSSIERRHYDSNHSSQ 347
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 25.4 bits (53), Expect = 8.5
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Frame = +2
Query: 320 DCLQQVST-LHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNK 496
D ++++ T L EK +E K KSK K+ K L + + K
Sbjct: 141 DVIEKLQTSTPLLQYLAEKKNAVVE--KGKSKPSKKSVKAKKKLRLAEKPASNNSKAGKS 198
Query: 497 NSETAKSSPSPERQHG----DTKISKQKPVQPVLKKSPL 601
+ E+ KSS +P + K+S +K + KK+P+
Sbjct: 199 SQESKKSSKAPAESAAAVIKEDKVSDRKKSKKKPKKTPV 237
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 152 FGNLEKIIVRELSCRLCLCTDVVKLKPLSNEVKRKLK 262
F ++ ++++ LS ++ LC ++ + NEVK L+
Sbjct: 330 FYDVHSLLLKNLSSKIKLCNHILMYQATFNEVKNFLQ 366
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,908,733
Number of Sequences: 5004
Number of extensions: 58827
Number of successful extensions: 203
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -