Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2l07
         (737 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o...    31   3.3  
BC109234-1|AAI09235.1|  665|Homo sapiens dual specificity phosph...    31   3.3  
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein...    31   3.3  
U86751-1|AAB68608.1|  510|Homo sapiens nucleolar fibrillar cente...    31   4.3  
EF560747-1|ABQ59057.1|  538|Homo sapiens TXNDC2 protein protein.       31   4.3  
BC050132-1|AAH50132.1|  486|Homo sapiens thioredoxin domain cont...    31   4.3  
BC038992-1|AAH38992.1|  510|Homo sapiens CD3e molecule, epsilon ...    31   4.3  
AK097656-1|BAC05133.1|  553|Homo sapiens protein ( Homo sapiens ...    31   4.3  
AF080095-1|AAK94950.1|  486|Homo sapiens sperm-specific thioredo...    31   4.3  
AF017633-1|AAD41158.1|  512|Homo sapiens CD3e-associated protein...    31   4.3  
M77016-1|AAA61224.1|  359|Homo sapiens tropomodulin protein.           31   5.7  
BC002660-1|AAH02660.1|  359|Homo sapiens tropomodulin 1 protein.       31   5.7  
AL162385-1|CAI12854.1|  359|Homo sapiens tropomodulin 1 protein.       31   5.7  
AF288155-1|AAG30124.1|  359|Homo sapiens erythrocyte tropomoduli...    31   5.7  
M65085-1|AAA52477.1|  695|Homo sapiens follicle stimulating horm...    30   7.5  
BC026189-1|AAH26189.3|  357|Homo sapiens Sad1 and UNC84 domain c...    30   7.5  
AF429967-1|AAP97300.1|  354|Homo sapiens hypothetical protein pr...    30   7.5  

>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
           the AP-3 complex protein.
          Length = 1094

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 18/81 (22%), Positives = 36/81 (44%)
 Frame = +2

Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
           K K K + +DG            S ++      +S  ++S   PE +    +++K+K  +
Sbjct: 745 KAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTKEKEKK 804

Query: 578 PVLKKSPLDMKLMEAMSLDEF 640
               ++PL  K +  + LD+F
Sbjct: 805 TKQDRTPL-TKDVSLLDLDDF 824


>BC109234-1|AAI09235.1|  665|Homo sapiens dual specificity
           phosphatase 16 protein.
          Length = 665

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
 Frame = +2

Query: 326 LQQVSTLHLYAVKVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSE 505
           +Q +S LHL A ++E + K         K      + +    L G  S ED  +  K S 
Sbjct: 377 VQALSGLHLSADRLEDSNKLKRSFSLDIKSVSY--SASMAASLHGFSSSEDALEYYKPST 434

Query: 506 TAKSSPSPERQHGDTKISKQKP-VQPVLKKSPLDMKLMEAMSLD-EFAITEKVDKNLLGT 679
           T   +    +     ++S+Q P   P  +++ +  KL  A   D +      V  +  GT
Sbjct: 435 TLDGTNKLCQFSPVQELSEQTPETSPDKEEASIPKKLQTARPSDSQSKRLHSVRTSSSGT 494

Query: 680 SPKNRLSPIIRTKIVNQN 733
           + ++ LSP++R+  V  N
Sbjct: 495 AQRSLLSPLLRSGSVEDN 512


>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
           complex 3, beta 1 subunit protein.
          Length = 1094

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 18/81 (22%), Positives = 36/81 (44%)
 Frame = +2

Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
           K K K + +DG            S ++      +S  ++S   PE +    +++K+K  +
Sbjct: 745 KAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTKEKEKK 804

Query: 578 PVLKKSPLDMKLMEAMSLDEF 640
               ++PL  K +  + LD+F
Sbjct: 805 TKQDRTPL-TKDVSLLDLDDF 824


>U86751-1|AAB68608.1|  510|Homo sapiens nucleolar fibrillar center
           protein protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
           K+  K ++QD T    T ++G    +DL+     + T K     ER H  T     +P+Q
Sbjct: 385 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 439

Query: 578 PVLKKSP 598
           P+  + P
Sbjct: 440 PLEPELP 446


>EF560747-1|ABQ59057.1|  538|Homo sapiens TXNDC2 protein protein.
          Length = 538

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +2

Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
           K E   K  E   Q  +G+    +   + P +G ++   +K S         SP    Q 
Sbjct: 190 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 249

Query: 539 -HGDTKISKQKPVQPVLKKSP 598
             GD   S  KP+QP L   P
Sbjct: 250 KEGDIPKSSAKPIQPKLGNIP 270


>BC050132-1|AAH50132.1|  486|Homo sapiens thioredoxin domain
           containing 2 (spermatozoa) protein.
          Length = 486

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +2

Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
           K E   K  E   Q  +G+    +   + P +G ++   +K S         SP    Q 
Sbjct: 123 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 182

Query: 539 -HGDTKISKQKPVQPVLKKSP 598
             GD   S  KP+QP L   P
Sbjct: 183 KEGDIPKSSAKPIQPKLGNIP 203


>BC038992-1|AAH38992.1|  510|Homo sapiens CD3e molecule, epsilon
           associated protein protein.
          Length = 510

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
           K+  K ++QD T    T ++G    +DL+     + T K     ER H  T     +P+Q
Sbjct: 385 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 439

Query: 578 PVLKKSP 598
           P+  + P
Sbjct: 440 PLEPELP 446


>AK097656-1|BAC05133.1|  553|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40337 fis, clone TESTI2032044, moderately
           similar to THIOREDOXIN. ).
          Length = 553

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +2

Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
           K E   K  E   Q  +G+    +   + P +G ++   +K S         SP    Q 
Sbjct: 190 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 249

Query: 539 -HGDTKISKQKPVQPVLKKSP 598
             GD   S  KP+QP L   P
Sbjct: 250 KEGDIPKSSAKPIQPKLGNIP 270


>AF080095-1|AAK94950.1|  486|Homo sapiens sperm-specific thioredoxin
           protein.
          Length = 486

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +2

Query: 362 KVEKTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQ- 538
           K E   K  E   Q  +G+    +   + P +G ++   +K S         SP    Q 
Sbjct: 123 KKEDLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNIAKTSVKPSQPKESDIPKSPEETIQP 182

Query: 539 -HGDTKISKQKPVQPVLKKSP 598
             GD   S  KP+QP L   P
Sbjct: 183 KEGDIPKSSAKPIQPKLGNIP 203


>AF017633-1|AAD41158.1|  512|Homo sapiens CD3e-associated protein
           protein.
          Length = 512

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 398 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKQKPVQ 577
           K+  K ++QD T    T ++G    +DL+     + T K     ER H  T     +P+Q
Sbjct: 387 KKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTSTKKKKKKKERGHTVT-----EPIQ 441

Query: 578 PVLKKSP 598
           P+  + P
Sbjct: 442 PLEPELP 448


>M77016-1|AAA61224.1|  359|Homo sapiens tropomodulin protein.
          Length = 359

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 482 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 628
           KQ+ +  +     P    + G   + KQKP+ PVL+   L+ +L EA++
Sbjct: 73  KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121


>BC002660-1|AAH02660.1|  359|Homo sapiens tropomodulin 1 protein.
          Length = 359

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 482 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 628
           KQ+ +  +     P    + G   + KQKP+ PVL+   L+ +L EA++
Sbjct: 73  KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121


>AL162385-1|CAI12854.1|  359|Homo sapiens tropomodulin 1 protein.
          Length = 359

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 482 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 628
           KQ+ +  +     P    + G   + KQKP+ PVL+   L+ +L EA++
Sbjct: 73  KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121


>AF288155-1|AAG30124.1|  359|Homo sapiens erythrocyte tropomodulin
           protein.
          Length = 359

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 482 KQSNKNSETAKSSPSPERQHGDTKISKQKPVQPVLKKSPLDMKLMEAMS 628
           KQ+ +  +     P    + G   + KQKP+ PVL+   L+ +L EA++
Sbjct: 73  KQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121


>M65085-1|AAA52477.1|  695|Homo sapiens follicle stimulating hormone
           receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
 Frame = +2

Query: 134 KNRMNDFGNLEKIIVRELSCRLCLCTDVVKLKPLSNEVK-RKLKRLFDITVRADDNLPKA 310
           K   + FG+LEKI + +      +  DV    P  +E++  K   L  IT  A  NLP  
Sbjct: 63  KGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYITPEAFQNLPN- 121

Query: 311 ICHDCLQQVSTLHLYAV-KVEKTQKFL 388
           + +  +      HL  V K+   QK L
Sbjct: 122 LQYLLISNTGIKHLPDVHKIHSLQKVL 148


>BC026189-1|AAH26189.3|  357|Homo sapiens Sad1 and UNC84 domain
           containing 1 protein.
          Length = 357

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = -2

Query: 265 PLEFSLYFIAERFEFHYISTKTQTAGQFTYNDF---LQISEIVHSVLELRGITKVKVMLN 95
           P EFS+Y I ++ E   I       GQF YN     +Q  E+ H+V E     K+ +  N
Sbjct: 281 PKEFSVYGITKKCEGEEIFL-----GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSN 335

Query: 94  CT*PNFRCFF 65
              P + C +
Sbjct: 336 WGHPKYTCLY 345


>AF429967-1|AAP97300.1|  354|Homo sapiens hypothetical protein
           protein.
          Length = 354

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = -2

Query: 265 PLEFSLYFIAERFEFHYISTKTQTAGQFTYNDF---LQISEIVHSVLELRGITKVKVMLN 95
           P EFS+Y I ++ E   I       GQF YN     +Q  E+ H+V E     K+ +  N
Sbjct: 278 PKEFSVYGITKKCEGEEIFL-----GQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSN 332

Query: 94  CT*PNFRCFF 65
              P + C +
Sbjct: 333 WGHPKYTCLY 342


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,046,938
Number of Sequences: 237096
Number of extensions: 1828639
Number of successful extensions: 4473
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4465
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)