Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2l05
(761 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122061-1|AAM52573.1| 477|Drosophila melanogaster AT01267p pro... 40 0.005
AE014297-3517|AAF56272.1| 477|Drosophila melanogaster CG13611-P... 40 0.005
BT028840-1|ABI34221.2| 232|Drosophila melanogaster RT01103p pro... 32 0.98
BT028810-1|ABI34191.2| 232|Drosophila melanogaster RT01003p pro... 32 0.98
AE014297-508|AAF54088.1| 252|Drosophila melanogaster CG1048-PA ... 32 0.98
AE001572-11|AAD19801.1| 252|Drosophila melanogaster DNA-binding... 32 0.98
AY075441-1|AAL68255.1| 612|Drosophila melanogaster RE02696p pro... 31 1.3
AE014297-146|AAF52098.2| 612|Drosophila melanogaster CG31530-PA... 31 1.3
AY094837-1|AAM11190.1| 890|Drosophila melanogaster LD45081p pro... 31 1.7
AE014296-3300|AAF49051.1| 890|Drosophila melanogaster CG17149-P... 31 1.7
AE014296-3299|AAF49052.1| 890|Drosophila melanogaster CG17149-P... 31 1.7
>AY122061-1|AAM52573.1| 477|Drosophila melanogaster AT01267p
protein.
Length = 477
Score = 39.5 bits (88), Expect = 0.005
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +3
Query: 549 RFEINQYQNMLDQSMKDLFQRHKVDLQAERNRLRYYDQTCMESHIRGALLFPTSKEIMRS 728
+FE+ +Y +MLD M F+ + +L R R+ + ME HI L F S+ M +
Sbjct: 104 KFELGRYIDMLDLRMPK-FRSKRFNL---RERV-----SNMEQHICHHLFFSKSRNFMLN 154
Query: 729 TVKLVCGAPAN 761
V+LVCG PAN
Sbjct: 155 LVQLVCGVPAN 165
>AE014297-3517|AAF56272.1| 477|Drosophila melanogaster CG13611-PA
protein.
Length = 477
Score = 39.5 bits (88), Expect = 0.005
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +3
Query: 549 RFEINQYQNMLDQSMKDLFQRHKVDLQAERNRLRYYDQTCMESHIRGALLFPTSKEIMRS 728
+FE+ +Y +MLD M F+ + +L R R+ + ME HI L F S+ M +
Sbjct: 104 KFELGRYIDMLDLRMPK-FRSKRFNL---RERV-----SNMEQHICHHLFFSKSRNFMLN 154
Query: 729 TVKLVCGAPAN 761
V+LVCG PAN
Sbjct: 155 LVQLVCGVPAN 165
>BT028840-1|ABI34221.2| 232|Drosophila melanogaster RT01103p
protein.
Length = 232
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 498 VECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAERNR 644
+E +FH YL+ R EI+Q + ++ +K FQ ++ L+ NR
Sbjct: 36 IELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNR 84
>BT028810-1|ABI34191.2| 232|Drosophila melanogaster RT01003p
protein.
Length = 232
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 498 VECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAERNR 644
+E +FH YL+ R EI+Q + ++ +K FQ ++ L+ NR
Sbjct: 36 IELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNR 84
>AE014297-508|AAF54088.1| 252|Drosophila melanogaster CG1048-PA
protein.
Length = 252
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 498 VECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAERNR 644
+E +FH YL+ R EI+Q + ++ +K FQ ++ L+ NR
Sbjct: 56 IELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNR 104
>AE001572-11|AAD19801.1| 252|Drosophila melanogaster
DNA-binding-protein,transcription-factor protein.
Length = 252
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 498 VECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAERNR 644
+E +FH YL+ R EI+Q + ++ +K FQ ++ L+ NR
Sbjct: 56 IELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTNR 104
>AY075441-1|AAL68255.1| 612|Drosophila melanogaster RE02696p
protein.
Length = 612
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 480 HQNGNTVECTNDFHEFDYLSVMERFEI 560
H+N N + CT HE DY SV+ ++++
Sbjct: 120 HRNSNVIPCTEFQHESDYHSVVTQYDL 146
>AE014297-146|AAF52098.2| 612|Drosophila melanogaster CG31530-PA
protein.
Length = 612
Score = 31.5 bits (68), Expect = 1.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 480 HQNGNTVECTNDFHEFDYLSVMERFEI 560
H+N N + CT HE DY SV+ ++++
Sbjct: 120 HRNSNVIPCTEFQHESDYHSVVTQYDL 146
>AY094837-1|AAM11190.1| 890|Drosophila melanogaster LD45081p
protein.
Length = 890
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 156 VIILGCSLSGIVAAHKLKRRFGDSMDIVVLD 248
VI++G +SG+ AH+L ++FG MD++VL+
Sbjct: 267 VIVIGAGISGLAVAHQL-QQFG--MDVIVLE 294
>AE014296-3300|AAF49051.1| 890|Drosophila melanogaster CG17149-PB,
isoform B protein.
Length = 890
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 156 VIILGCSLSGIVAAHKLKRRFGDSMDIVVLD 248
VI++G +SG+ AH+L ++FG MD++VL+
Sbjct: 267 VIVIGAGISGLAVAHQL-QQFG--MDVIVLE 294
>AE014296-3299|AAF49052.1| 890|Drosophila melanogaster CG17149-PA,
isoform A protein.
Length = 890
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/31 (45%), Positives = 24/31 (77%)
Frame = +3
Query: 156 VIILGCSLSGIVAAHKLKRRFGDSMDIVVLD 248
VI++G +SG+ AH+L ++FG MD++VL+
Sbjct: 267 VIVIGAGISGLAVAHQL-QQFG--MDVIVLE 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,687,506
Number of Sequences: 53049
Number of extensions: 728371
Number of successful extensions: 1756
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -