Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2l05
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 30 1.6
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 30 1.6
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 30 1.6
AL117195-18|CAB55029.1| 490|Caenorhabditis elegans Hypothetical... 29 3.6
AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical ... 29 3.6
Z46266-5|CAA86412.1| 375|Caenorhabditis elegans Hypothetical pr... 28 6.3
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 28 6.3
Z77667-3|CAB01237.1| 527|Caenorhabditis elegans Hypothetical pr... 28 8.3
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 8.3
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 444 ERVRTRLTKLFQHQNGNTVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVD 623
E RTR T + T+E +FH YL+ R EI++ ++ ++ +K FQ ++
Sbjct: 127 ESKRTRQT----YSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMK 182
Query: 624 LQAE 635
+ E
Sbjct: 183 HKKE 186
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 444 ERVRTRLTKLFQHQNGNTVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVD 623
E RTR T + T+E +FH YL+ R EI++ ++ ++ +K FQ ++
Sbjct: 116 ESKRTRQT----YSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMK 171
Query: 624 LQAE 635
+ E
Sbjct: 172 HKKE 175
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +3
Query: 444 ERVRTRLTKLFQHQNGNTVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVD 623
E RTR T + T+E +FH YL+ R EI++ ++ ++ +K FQ ++
Sbjct: 116 ESKRTRQT----YSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMK 171
Query: 624 LQAE 635
+ E
Sbjct: 172 HKKE 175
>AL117195-18|CAB55029.1| 490|Caenorhabditis elegans Hypothetical
protein Y57A10A.25 protein.
Length = 490
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 510 NDFHEFDYLSVMERFEINQYQNMLDQSMKD-LFQRHKVDLQAERNRLRYYDQTCMES 677
+D +YL V + + +YQ + S + +F+R + D + ER RY+ + C S
Sbjct: 209 SDMFPDNYLPVADSKYLAEYQTRMTASFLEYVFRRTQGDNEIERQNNRYHIEICFPS 265
>AF067936-2|AAC19213.1| 527|Caenorhabditis elegans Hypothetical
protein C24G6.6 protein.
Length = 527
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 111 VQKLDETHKKSVKADVIILGCSLSGIVAAHKLKRRFGDSMDI 236
VQK E S+K + I+G +SG+ A +L D DI
Sbjct: 19 VQKESEKGDSSIKPSIAIVGAGISGLSTARRLIELGIDDFDI 60
>Z46266-5|CAA86412.1| 375|Caenorhabditis elegans Hypothetical
protein C07B5.5 protein.
Length = 375
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 363 IENVARFYLAKYAK--EFHVPLPDVIIAPERVRTRLTKLFQHQNGNTVECTNDFHEFDYL 536
+E +A + +AK EF+ L D ++AP + + ++ + ++C +H D L
Sbjct: 246 LETMAGYSFTNFAKSKEFNADLYDTLVAPTLKTDLVVETWRRGSEIPLDCKLTYHANDAL 305
Query: 537 SV 542
S+
Sbjct: 306 SI 307
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 757 AGAPQTSLTVDLIISLEVGNNNAPRI 680
+G P S T+++++++E GN + P I
Sbjct: 305 SGVPPLSTTLNIVVNMEYGNEHEPNI 330
>Z77667-3|CAB01237.1| 527|Caenorhabditis elegans Hypothetical
protein M04B2.4 protein.
Length = 527
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 147 KADVIILGCSLSGIVAAHKLKRRFGD-SMDIVVLD 248
+A+++I+G LSG A LK RF D +VV++
Sbjct: 93 RAEIVIIGGGLSGSSTAFWLKERFRDEDFKVVVVE 127
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 533 IVELVEVIGTFYSVTVLVLEQLGQPSPDSFRGYY 432
IV + + I T S T+L+ Q SP GYY
Sbjct: 301 IVMIPDGISTISSTTILLTSQFATSSPSQIVGYY 334
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,996,343
Number of Sequences: 27780
Number of extensions: 385630
Number of successful extensions: 931
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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