Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2l03
         (361 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   2.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   3.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   6.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   8.8  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    20   8.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   8.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 218  KKKIIRDIELAKLKKKIDAEEKETIRLLETGKLFE 322
            ++K ++  E  KL  KIDA++ + +  +E   +FE
Sbjct: 1384 EEKNLQVNESGKLIHKIDAQDCDFVDEIEMFSMFE 1418


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 76  FAVWSATACFTVD*RFEICLFNSRNYICSGQAK 174
           FAV +  A +       +C ++S+++   GQAK
Sbjct: 10  FAVATLFAAYCKAESKVVCYYDSKSHFRQGQAK 42


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 89  PPQPV-SPLIRGLRFAFLIAGIIYA 160
           P Q V  P  R LRF++  A ++YA
Sbjct: 34  PVQGVRGPDFRSLRFSWKSARVVYA 58


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 89  PPQPV-SPLIRGLRFAFLIAGIIYA 160
           P Q V  P  R LRF++  A ++YA
Sbjct: 34  PVQGVRGPDFRSLRFSWKSARVVYA 58


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 203 YTMLPFCCKAFACPEHI*FLL 141
           Y  L FCC       H+ FLL
Sbjct: 263 YMHLLFCCAFIIFTMHLLFLL 283


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 300 WKRENYLNLTKN 335
           WK++N L  TKN
Sbjct: 288 WKKDNKLPNTKN 299


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 107 PLIRGLRFAFLIAGIIY 157
           PL++ L    L+ G++Y
Sbjct: 2   PLVKSLVVVVLLIGVVY 18


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 300 WKRENYLNLTKN 335
           WK++N L  TKN
Sbjct: 288 WKKDNKLPNTKN 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,274
Number of Sequences: 336
Number of extensions: 1339
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)