Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2l03
         (361 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    23   3.5  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   4.6  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   6.1  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   8.0  

>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 101 VSPLIRGLRFAFLIAGIIYARGKQKLYNKMEA 196
           ++PLI  L    L   I+++RG  +  +K+EA
Sbjct: 1   MTPLIATLAACALTLSIVHSRGLPESSDKLEA 32


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 149 IIYARGK-QKLYNKMEASYREEEAKKKIIRDIELAKLKKKIDAEEKE 286
           ++Y   K QKL  ++E   ++ E +K+ + +      KKKI+ +E++
Sbjct: 26  MVYRTEKYQKLKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEEK 72


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/38 (26%), Positives = 23/38 (60%)
 Frame = +2

Query: 161 RGKQKLYNKMEASYREEEAKKKIIRDIELAKLKKKIDA 274
           R KQK  N  +A+Y E++ K   +   ++ +L++++ +
Sbjct: 431 RDKQKNMNSSDAAYLEDKRKLTKVEG-QIGQLERELQS 467


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 2   VFLLIFDRSPLKLHFSVLFDEVIMSLPYG 88
           V +LI D S      S++FD +I   PYG
Sbjct: 286 VDVLIADFSRSIWADSIVFDSIITDPPYG 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,260
Number of Sequences: 2352
Number of extensions: 5998
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)