Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2l01
         (137 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P...    60   7e-09
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N...    58   5e-08
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro...    52   2e-06
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B...    46   1e-04
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P...    46   2e-04
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc...    44   5e-04
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte...    44   7e-04
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph...    43   0.002
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo...    40   0.008
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma...    38   0.033
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A...    37   0.076
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali...    36   0.17 
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro...    32   2.2  

>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
           Panarthropoda|Rep: Cytochrome c oxidase subunit I -
           Pagyris cymothoe
          Length = 487

 Score = 60.5 bits (140), Expect = 7e-09
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           LFSLN+PSSIE YQNLPPAEHSYNELPIL
Sbjct: 456 LFSLNMPSSIEWYQNLPPAEHSYNELPIL 484


>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
           Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
           tales
          Length = 95

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           LFSLN+PSSIE YQN PP+EHSYNELPIL
Sbjct: 44  LFSLNMPSSIEWYQNFPPSEHSYNELPIL 72


>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
           Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
           powelli
          Length = 52

 Score = 52.0 bits (119), Expect = 2e-06
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           LFSLN+ SSIE  QN PPAEHSYNELPIL
Sbjct: 21  LFSLNMNSSIEWLQNFPPAEHSYNELPIL 49


>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
           Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
           cynthia ricini (Indian eri silkmoth)
          Length = 510

 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 24/41 (58%), Positives = 27/41 (65%)
 Frame = +1

Query: 4   LLFENQ*LTNELTYFL*ISHHQLNDIKIYHQQNIHIMNYQF 126
           LLFENQ    EL Y   +    LND KIY QQ+IH+MNYQF
Sbjct: 467 LLFENQSFITELLYLPSMYLLLLNDTKIYLQQSIHMMNYQF 507


>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
           Pancrustacea|Rep: Cytochrome c oxidase subunit I -
           Psilochaeta pampiana
          Length = 76

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           LFS+ L SSIE  QN PPAEHSY+ELP+L
Sbjct: 45  LFSIQLCSSIEWLQNSPPAEHSYSELPLL 73


>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
           norvegica|Rep: Cytochrome oxidase subunit I - Psyche
           norvegica
          Length = 63

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           LF  N+ SSIE +QN PPA HSY+E+PIL
Sbjct: 32  LFPSNMTSSIEWFQNTPPANHSYDEMPIL 60


>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
           Pterygota|Rep: Cytochrome oxidase subunit I -
           Biopyrellia bipuncta
          Length = 68

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           +F + L SS+E  QN PPAEHSYNELP+L
Sbjct: 37  IFPVQLNSSMEWLQNTPPAEHSYNELPLL 65


>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
           Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
           microsetosus
          Length = 68

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           +F LNL +SIE   NLPP EHSY+ELP++
Sbjct: 37  MFKLNLNNSIEWIHNLPPLEHSYSELPLV 65


>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
           Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
           flavicollis
          Length = 57

 Score = 40.3 bits (90), Expect = 0.008
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           LF     +SIE  QNLPPAEHSY+ELP +
Sbjct: 25  LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53


>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
           Eumalacostraca|Rep: Cytochrome oxidase subunit I -
           Paguristes turgidus
          Length = 68

 Score = 38.3 bits (85), Expect = 0.033
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           +FSL+L SSIE   + PPA+HSY E+P++
Sbjct: 37  MFSLSLASSIEWEHSYPPADHSYMEIPMI 65


>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
           Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
           Phylloxera sp. DAD-2001a
          Length = 83

 Score = 37.1 bits (82), Expect = 0.076
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPILKK 134
           +F LNL +SI    N+PP  H+Y+ELP++ K
Sbjct: 52  IFKLNLNNSIGWIHNMPPIGHTYSELPLITK 82


>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
           Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
           saltator
          Length = 59

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 12/29 (41%), Positives = 23/29 (79%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELPIL 128
           +F +++P+S+E +   PPA+HSY++ P+L
Sbjct: 28  MFHMHMPTSLEWHHPSPPADHSYDDTPLL 56


>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
           protein - Balanus crenatus
          Length = 58

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 42  LFSLNLPSSIE*YQNLPPAEHSYNELP 122
           +FS NL S++E     PP  HSY+ELP
Sbjct: 27  IFSPNLSSNLEWVHTTPPHYHSYDELP 53


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,856,136
Number of Sequences: 1657284
Number of extensions: 1222730
Number of successful extensions: 2759
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 575,637,011
effective HSP length: 26
effective length of database: 532,547,627
effective search space used: 10118404913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)