Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2k24
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16740 Cluster: Putative ATP-dependent Clp protease pro... 234 1e-60
UniRef50_Q9VKY3 Cluster: ATP-dependent Clp protease proteolytic ... 231 1e-59
UniRef50_Q01HQ5 Cluster: ATP-dependent Clp protease proteolytic ... 206 5e-52
UniRef50_Q1RJH2 Cluster: ATP-dependent Clp protease proteolytic ... 191 1e-47
UniRef50_O67357 Cluster: ATP-dependent Clp protease proteolytic ... 188 1e-46
UniRef50_Q8XYP7 Cluster: ATP-dependent Clp protease proteolytic ... 186 3e-46
UniRef50_Q6G3Z3 Cluster: ATP-dependent Clp protease proteolytic ... 185 1e-45
UniRef50_Q8YHC8 Cluster: ATP-dependent Clp protease proteolytic ... 184 1e-45
UniRef50_Q8RC25 Cluster: ATP-dependent Clp protease proteolytic ... 178 8e-44
UniRef50_Q1IRD8 Cluster: ATP-dependent Clp protease proteolytic ... 178 1e-43
UniRef50_UPI0000DB7F4F Cluster: PREDICTED: similar to Putative A... 163 3e-39
UniRef50_Q59993 Cluster: ATP-dependent Clp protease proteolytic ... 163 3e-39
UniRef50_Q8YQX8 Cluster: ATP-dependent Clp protease proteolytic ... 163 3e-39
UniRef50_A4R250 Cluster: ATP-dependent Clp protease proteolytic ... 156 4e-37
UniRef50_Q8DST7 Cluster: ATP-dependent Clp protease proteolytic ... 153 4e-36
UniRef50_Q2UPZ9 Cluster: ATP-dependent Clp protease proteolytic ... 148 1e-34
UniRef50_UPI0000D9E9DE Cluster: PREDICTED: ClpP caseinolytic pep... 144 2e-33
UniRef50_Q82NZ3 Cluster: ATP-dependent Clp protease proteolytic ... 136 3e-31
UniRef50_Q9ZH58 Cluster: ATP-dependent Clp protease proteolytic ... 134 2e-30
UniRef50_Q70AH6 Cluster: ATP-dependent Clp protease proteolytic ... 133 3e-30
UniRef50_Q7MX09 Cluster: ATP-dependent Clp protease proteolytic ... 131 2e-29
UniRef50_Q7UK67 Cluster: ATP-dependent Clp protease proteolytic ... 130 2e-29
UniRef50_Q9FCC9 Cluster: Putative ATP-dependent Clp protease pro... 127 2e-28
UniRef50_P56317 Cluster: ATP-dependent Clp protease proteolytic ... 123 3e-27
UniRef50_Q300E3 Cluster: ATP-dependent Clp protease proteolytic ... 121 1e-26
UniRef50_A7PR54 Cluster: Chromosome chr14 scaffold_26, whole gen... 121 1e-26
UniRef50_Q9MUV8 Cluster: ATP-dependent Clp protease proteolytic ... 121 2e-26
UniRef50_Q7NEW1 Cluster: ATP-dependent Clp protease proteolytic ... 118 9e-26
UniRef50_O82421 Cluster: ATP-dependent Clp protease proteolytic ... 118 2e-25
UniRef50_A7AQC7 Cluster: ATP-dependent Clp protease proteolytic ... 118 2e-25
UniRef50_Q2J9A8 Cluster: ATP-dependent Clp protease proteolytic ... 117 2e-25
UniRef50_A4RXD2 Cluster: ATP-dependent Clp protease proteolytic ... 116 5e-25
UniRef50_Q36863 Cluster: ATP-dependent Clp protease proteolytic ... 114 2e-24
UniRef50_P56772 Cluster: ATP-dependent Clp protease proteolytic ... 114 2e-24
UniRef50_A1SKA5 Cluster: ATP-dependent Clp protease proteolytic ... 112 6e-24
UniRef50_A7ATV1 Cluster: ATP-dependent Clp protease proteolytic ... 111 1e-23
UniRef50_Q72R01 Cluster: ATP-dependent Clp protease proteolytic ... 107 2e-22
UniRef50_Q50DZ1 Cluster: ATP-dependent Clp protease proteolytic ... 107 2e-22
UniRef50_Q98RW7 Cluster: ATP-dependent Clp protease proteolytic ... 106 4e-22
UniRef50_Q4UIN3 Cluster: ATP-dependent Clp protease proteolytic ... 102 7e-21
UniRef50_Q06R14 Cluster: ATP-dependent Clp protease proteolytic ... 101 2e-20
UniRef50_Q93ZD4 Cluster: ATP-dependent Clp protease proteolytic ... 100 3e-20
UniRef50_A7CRR7 Cluster: Endopeptidase Clp; n=1; Opitutaceae bac... 100 4e-20
UniRef50_Q9FHJ7 Cluster: ATP-dependent Clp protease proteolytic ... 99 8e-20
UniRef50_Q4UAC9 Cluster: ATP-dependent Clp protease proteolytic ... 99 8e-20
UniRef50_O48891 Cluster: ATP-dependent Clp protease proteolytic ... 98 1e-19
UniRef50_Q5Z0M5 Cluster: ATP-dependent Clp protease proteolytic ... 98 2e-19
UniRef50_Q8LB10 Cluster: ATP-dependent Clp protease proteolytic ... 98 2e-19
UniRef50_A0LYF8 Cluster: ATP-dependent Clp protease proteolytic ... 97 2e-19
UniRef50_Q00TD8 Cluster: Putative ATP-dependent Clp protease pro... 97 3e-19
UniRef50_A4RST7 Cluster: ATP-dependent Clp protease proteolytic ... 97 4e-19
UniRef50_A2XFV5 Cluster: ATP-dependent Clp protease proteolytic ... 96 8e-19
UniRef50_P26567 Cluster: ATP-dependent Clp protease proteolytic ... 96 8e-19
UniRef50_Q9MTJ8 Cluster: ATP-dependent Clp protease proteolytic ... 94 3e-18
UniRef50_Q3LW65 Cluster: ATP-dependent Clp protease proteolytic ... 93 4e-18
UniRef50_A5KB90 Cluster: ATP-dependent Clp protease proteolytic ... 91 2e-17
UniRef50_A6DMN5 Cluster: ATP-dependent Clp protease proteolytic ... 91 2e-17
UniRef50_O97252 Cluster: ATP-dependent Clp protease proteolytic ... 91 2e-17
UniRef50_P48254 Cluster: Putative ATP-dependent Clp protease pro... 91 2e-17
UniRef50_Q06FP3 Cluster: ATP-dependent Clp protease proteolytic ... 90 5e-17
UniRef50_A5BHP1 Cluster: ATP-dependent Clp protease proteolytic ... 89 7e-17
UniRef50_Q3LWG6 Cluster: ATP-dependent Clp protease proteolytic ... 87 3e-16
UniRef50_Q9PJW1 Cluster: ATP-dependent Clp protease proteolytic ... 87 4e-16
UniRef50_Q1PYX1 Cluster: ATP-dependent Clp protease proteolytic ... 87 5e-16
UniRef50_O84003 Cluster: ATP-dependent Clp protease proteolytic ... 86 8e-16
UniRef50_A5K0N3 Cluster: ATP-dependent Clp protease proteolytic ... 82 1e-14
UniRef50_Q5FQT4 Cluster: ATP-dependent Clp protease proteolytic ... 80 5e-14
UniRef50_Q5IX12 Cluster: ATP-dependent Clp protease proteolytic ... 79 1e-13
UniRef50_A4RSQ9 Cluster: ATP-dependent Clp protease proteolytic ... 79 1e-13
UniRef50_Q67XY5 Cluster: ATP-dependent Clp protease proteolytic ... 78 2e-13
UniRef50_Q2WGG1 Cluster: ATP-dependent Clp protease proteolytic ... 78 2e-13
UniRef50_O51698 Cluster: ATP-dependent Clp protease proteolytic ... 77 5e-13
UniRef50_A4S2Q5 Cluster: ATP-dependent Clp protease proteolytic ... 76 9e-13
UniRef50_A4S2U0 Cluster: ATP-dependent Clp protease proteolytic ... 75 2e-12
UniRef50_UPI000050FD0C Cluster: COG0740: Protease subunit of ATP... 75 2e-12
UniRef50_A4E7Q8 Cluster: ATP-dependent Clp protease proteolytic ... 74 3e-12
UniRef50_P54414 Cluster: ATP-dependent Clp protease proteolytic ... 73 6e-12
UniRef50_Q8Y7Y1 Cluster: ATP-dependent Clp protease proteolytic ... 73 8e-12
UniRef50_Q2SJI3 Cluster: ATP-dependent Clp protease, proteolytic... 72 1e-11
UniRef50_Q06SH9 Cluster: Proteolytic subunit 2 of clp protease; ... 70 6e-11
UniRef50_Q9XJ35 Cluster: ATP-dependent Clp protease proteolytic ... 66 9e-10
UniRef50_A7QL58 Cluster: Chromosome chr3 scaffold_117, whole gen... 65 2e-09
UniRef50_Q4UBQ0 Cluster: ATP-dependent Clp protease proteolytic ... 64 3e-09
UniRef50_P42380 Cluster: ATP-dependent Clp protease proteolytic ... 62 9e-09
UniRef50_Q6C1Y5 Cluster: ATP-dependent Clp protease proteolytic ... 62 1e-08
UniRef50_P42379 Cluster: ATP-dependent Clp protease proteolytic ... 60 4e-08
UniRef50_A1WEU3 Cluster: ATP-dependent Clp protease proteolytic ... 59 1e-07
UniRef50_Q40943 Cluster: ATP-dependent clp protease proteolytic ... 58 2e-07
UniRef50_A1K6N2 Cluster: ATP-dependent Clp protease proteolytic ... 56 8e-07
UniRef50_O04018 Cluster: ATP-dependent Clp protease proteolytic ... 54 2e-06
UniRef50_Q9PFZ5 Cluster: ATP-dependent Clp protease proteolytic ... 53 7e-06
UniRef50_Q8ZQG9 Cluster: ATP-dependent Clp protease proteolytic ... 49 9e-05
UniRef50_Q3LVU8 Cluster: Clp protease; n=1; Bigelowiella natans|... 49 9e-05
UniRef50_A2Y843 Cluster: ATP-dependent Clp protease proteolytic ... 49 1e-04
UniRef50_Q1UAH7 Cluster: ATP-dependent Clp protease proteolytic ... 48 3e-04
UniRef50_Q9T1F7 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q4A301 Cluster: Putative ATP-dependent protease proteol... 45 0.001
UniRef50_Q01F40 Cluster: Clp protease 2 proteolytic subunit; n=1... 45 0.001
UniRef50_A7R7H5 Cluster: Chromosome undetermined scaffold_1785, ... 45 0.001
UniRef50_Q7P8G2 Cluster: ATP-dependent Clp protease proteolytic ... 44 0.002
UniRef50_A7CYV1 Cluster: Peptidase S14 ClpP precursor; n=1; Opit... 44 0.002
UniRef50_Q3EL78 Cluster: ATP-dependent Clp protease proteolytic ... 44 0.003
UniRef50_A3X5R0 Cluster: ATP-dependent Clp protease proteolytic ... 44 0.003
UniRef50_A3EHW0 Cluster: ATP-dependent Clp protease proteolytic ... 44 0.003
UniRef50_Q4JLM3 Cluster: ATP-dependent Clp protease proteolytic ... 43 0.008
UniRef50_A0IWL1 Cluster: ATP-dependent Clp protease proteolytic ... 43 0.008
UniRef50_Q65KG4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_Q3Z3P3 Cluster: ATP-dependent Clp protease proteolytic ... 42 0.017
UniRef50_A7FWE0 Cluster: Putative Clp protease; n=1; Clostridium... 42 0.017
UniRef50_Q892G9 Cluster: ATP-dependent Clp protease proteolytic ... 41 0.023
UniRef50_Q6SZ10 Cluster: ATP-dependent Clp protease proteolytic ... 41 0.023
UniRef50_A7BZX9 Cluster: Secreted protein; n=2; Beggiatoa sp. PS... 41 0.023
UniRef50_A1FMT8 Cluster: ATP-dependent Clp protease proteolytic ... 41 0.023
UniRef50_A5C4G8 Cluster: Putative uncharacterized protein; n=1; ... 41 0.023
UniRef50_Q8ZSM4 Cluster: Protease IV, conjectural; n=2; Pyrobacu... 41 0.023
UniRef50_Q65ES6 Cluster: ATP-dependent Clp protease proteolytic ... 40 0.040
UniRef50_Q3LW56 Cluster: ATP-dependent Clp protease proteolytic ... 40 0.040
UniRef50_A5KJS2 Cluster: ATP-dependent Clp protease proteolytic ... 40 0.053
UniRef50_A4J7R2 Cluster: ATP-dependent Clp protease proteolytic ... 39 0.093
UniRef50_A3JIS6 Cluster: ATP-dependent Clp protease proteolytic ... 39 0.093
UniRef50_Q7NYX7 Cluster: Putative uncharacterized protein; n=2; ... 39 0.12
UniRef50_Q97HW4 Cluster: ATP-dependent Clp protease proteolytic ... 38 0.16
UniRef50_A7GI71 Cluster: Putative Clp protease; n=1; Clostridium... 38 0.16
UniRef50_Q6R878 Cluster: 77ORF015; n=10; root|Rep: 77ORF015 - St... 38 0.21
UniRef50_Q7WLQ1 Cluster: ATP-dependent Clp protease proteolytic ... 37 0.37
UniRef50_A1VPI3 Cluster: Peptidase S14, ClpP precursor; n=1; Pol... 37 0.37
UniRef50_A5EQQ6 Cluster: Putative Peptidase S14, ClpP; n=1; Brad... 37 0.49
UniRef50_Q85X42 Cluster: ORF60d; n=1; Pinus koraiensis|Rep: ORF6... 37 0.49
UniRef50_Q0S7S6 Cluster: ATP-dependent Clp protease proteolytic ... 36 0.65
UniRef50_Q2AR30 Cluster: ATP-dependent Clp protease proteolytic ... 36 0.65
UniRef50_Q11IP3 Cluster: Peptidase S14, ClpP precursor; n=1; Mes... 36 0.86
UniRef50_A5V8D3 Cluster: ATP-dependent Clp protease proteolytic ... 36 0.86
UniRef50_A0VK63 Cluster: ATP-dependent Clp protease proteolytic ... 36 0.86
UniRef50_Q1A0W9 Cluster: Gp102; n=2; unclassified Siphoviridae|R... 36 1.1
UniRef50_A7E5X1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q9NDT9 Cluster: BCS-5; n=1; Balanus amphitrite|Rep: BCS... 35 1.5
UniRef50_Q982R9 Cluster: ATP-dependent Clp protease proteolytic ... 35 2.0
UniRef50_Q1IJ44 Cluster: Signal peptide peptidase SppA, 36K type... 35 2.0
UniRef50_A5ZRV6 Cluster: ATP-dependent Clp protease proteolytic ... 35 2.0
UniRef50_Q4ZCT9 Cluster: ORF015; n=14; root|Rep: ORF015 - Staphy... 35 2.0
UniRef50_Q2NPI5 Cluster: ClpP family protein; n=3; root|Rep: Clp... 35 2.0
UniRef50_O26897 Cluster: Protease IV; n=1; Methanothermobacter t... 35 2.0
UniRef50_Q0BQI3 Cluster: Signal peptide peptidase sppA; n=1; Gra... 34 2.6
UniRef50_A1ZY45 Cluster: ATP-dependent Clp protease proteolytic ... 34 2.6
UniRef50_Q3LWK4 Cluster: Clp protease; n=1; Bigelowiella natans|... 33 4.6
UniRef50_A7DYB1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q75QN7 Cluster: ATP-dependent Clp protease proteolytic ... 33 6.1
UniRef50_Q3A3D5 Cluster: Signal peptide peptidase SppA, 67K type... 33 8.0
UniRef50_A5NH97 Cluster: Peptidase S14, ClpP precursor; n=19; ro... 33 8.0
UniRef50_A5ICQ4 Cluster: Signal peptide peptidase; n=4; Legionel... 33 8.0
UniRef50_A4J0B7 Cluster: Signal peptidase, S49 family; n=11; Fra... 33 8.0
>UniRef50_Q16740 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial precursor; n=23;
cellular organisms|Rep: Putative ATP-dependent Clp
protease proteolytic subunit, mitochondrial precursor -
Homo sapiens (Human)
Length = 277
Score = 234 bits (573), Expect = 1e-60
Identities = 107/145 (73%), Positives = 125/145 (86%)
Frame = +1
Query: 226 ITNVYNVTRQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISS 405
+ N + R ++ + + L +IPIVVEQTGRGERAYDIYSRLLRERI+C+MGPI+D ++S
Sbjct: 38 LQNGLALQRCLHATATRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVAS 97
Query: 406 LIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASL 585
L++AQLLFLQSES+KKP+H+YINSPGG VTAGL IYDTMQYI PI TWCVGQA SM SL
Sbjct: 98 LVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSL 157
Query: 586 LLAAGAPGMRHALPNSRIMIHQPSG 660
LLAAG PGMRH+LPNSRIMIHQPSG
Sbjct: 158 LLAAGTPGMRHSLPNSRIMIHQPSG 182
>UniRef50_Q9VKY3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; Endopterygota|Rep: ATP-dependent Clp
protease proteolytic subunit - Drosophila melanogaster
(Fruit fly)
Length = 253
Score = 231 bits (564), Expect = 1e-59
Identities = 105/127 (82%), Positives = 117/127 (92%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 459
+ +IP+VVEQTGRGERAYDI+SRLL+ERIICLMG I DDISS +VAQLLFLQSE+ KP+
Sbjct: 27 INLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPI 86
Query: 460 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 639
HLYINSPGG VTAGL IYDTMQY+ PPIATWCVGQACSM SLLLAAGAPGMR++LPN+RI
Sbjct: 87 HLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARI 146
Query: 640 MIHQPSG 660
MIHQPSG
Sbjct: 147 MIHQPSG 153
>UniRef50_Q01HQ5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=10; Eukaryota|Rep: ATP-dependent Clp protease
proteolytic subunit - Oryza sativa (Rice)
Length = 259
Score = 206 bits (502), Expect = 5e-52
Identities = 93/126 (73%), Positives = 109/126 (86%)
Frame = +1
Query: 283 GMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVH 462
G++P+V+E T RGERAYDI+SRLL+ERI+C+ GPI DD +SL+VAQLLFL+SE+ KPVH
Sbjct: 35 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 94
Query: 463 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 642
LYINSPGG VTAGL IYDTMQYI P+ T C+GQA SMASLLLAAGA G R ALPN+R+M
Sbjct: 95 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVM 154
Query: 643 IHQPSG 660
IHQPSG
Sbjct: 155 IHQPSG 160
>UniRef50_Q1RJH2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=6; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Rickettsia bellii (strain
RML369-C)
Length = 227
Score = 191 bits (465), Expect = 1e-47
Identities = 85/127 (66%), Positives = 106/127 (83%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 459
+ +PIV+EQT RGERAYDIYSRLL+ERII + GPI D +++LI AQLLFL++E+ +K +
Sbjct: 23 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDI 82
Query: 460 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 639
++YINSPGG VTAGL IYDTMQYI P +AT C+GQACSM S LL G GMR++LP+SR+
Sbjct: 83 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 142
Query: 640 MIHQPSG 660
MIHQPSG
Sbjct: 143 MIHQPSG 149
>UniRef50_O67357 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=54; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Aquifex aeolicus
Length = 201
Score = 188 bits (458), Expect = 1e-46
Identities = 86/125 (68%), Positives = 107/125 (85%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
++PIV+EQT RGERAYDIYSRLL++RI+ L PI+D +++LIVAQLLFL+S+ K ++L
Sbjct: 10 LVPIVIEQTPRGERAYDIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYL 69
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
YINSPGG+VTAGL IYDTMQYI P + T C+GQA SM ++LLAAGAPG R+ALP+SRIMI
Sbjct: 70 YINSPGGSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRIMI 129
Query: 646 HQPSG 660
HQP G
Sbjct: 130 HQPLG 134
>UniRef50_Q8XYP7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=9; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 217
Score = 186 bits (454), Expect = 3e-46
Identities = 83/127 (65%), Positives = 108/127 (85%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 459
LG++P+VVEQ+GRGERAYDIYSRLL+ER+I ++G +ND ++L+VAQLLFL+SE+ K +
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDI 82
Query: 460 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 639
LYINSPGG+V+AGL +YDTMQ++ P ++T C+G A SM + LLAAGA G R+ALPNSRI
Sbjct: 83 SLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRI 142
Query: 640 MIHQPSG 660
MIHQP G
Sbjct: 143 MIHQPLG 149
>UniRef50_Q6G3Z3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=256; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit - Bartonella henselae
(Rochalimaea henselae)
Length = 210
Score = 185 bits (450), Expect = 1e-45
Identities = 82/127 (64%), Positives = 105/127 (82%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 459
L ++P+V+EQT RGERAYDI+SRLL+ERII + GP+ D ++ L+ AQLLFL++E+ KK +
Sbjct: 9 LSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLEAENPKKEI 68
Query: 460 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 639
LYINSPGG VT+G+ IYDTMQ+I PP++T C+GQA SM SLLL AGA G R LPN+RI
Sbjct: 69 SLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHRFTLPNARI 128
Query: 640 MIHQPSG 660
M+HQPSG
Sbjct: 129 MVHQPSG 135
>UniRef50_Q8YHC8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=235; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit - Brucella melitensis
Length = 209
Score = 184 bits (449), Expect = 1e-45
Identities = 82/128 (64%), Positives = 108/128 (84%)
Frame = +1
Query: 277 LLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKP 456
++ ++P+VVEQT RGERAYDI+SRLL+ERII + GP+ D +S L+ AQLLFL++E+ KK
Sbjct: 8 VMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLEAENPKKE 67
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
+++YINSPGG VT+G+ IYDTMQ+I PP++T C+GQA SM SLLL AGA G R+AL N+R
Sbjct: 68 INMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNAR 127
Query: 637 IMIHQPSG 660
IM+HQPSG
Sbjct: 128 IMVHQPSG 135
>UniRef50_Q8RC25 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Thermoanaerobacter tengcongensis
Length = 195
Score = 178 bits (434), Expect = 8e-44
Identities = 83/127 (65%), Positives = 101/127 (79%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 459
+ ++PIVVEQT RGERAYDI+SRLL++RI+ L IND +SL++AQ+LFL++E K +
Sbjct: 1 MSLVPIVVEQTNRGERAYDIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDI 60
Query: 460 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 639
LYINSPGG++TAGL IYDTMQYI P + T CVG A SMA+ LLAAGA G R ALPNS I
Sbjct: 61 WLYINSPGGSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 640 MIHQPSG 660
MIHQP G
Sbjct: 121 MIHQPWG 127
>UniRef50_Q1IRD8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 194
Score = 178 bits (433), Expect = 1e-43
Identities = 78/123 (63%), Positives = 104/123 (84%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
++P+V+EQT RGERAYDIYSRLLR+ II L PI+D++++LI+AQ+LFL++E +K + L
Sbjct: 2 LVPMVIEQTSRGERAYDIYSRLLRDNIIFLGTPIDDNVANLIIAQMLFLEAEDPEKDISL 61
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
YINSPGG++TAG+ IYDTMQ+I P +AT C+GQ SM + LLA+GAPG R+ALP SRI+I
Sbjct: 62 YINSPGGSITAGMAIYDTMQFIRPDVATICIGQCASMGATLLASGAPGKRYALPTSRILI 121
Query: 646 HQP 654
HQP
Sbjct: 122 HQP 124
>UniRef50_UPI0000DB7F4F Cluster: PREDICTED: similar to Putative
ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor (Endopeptidase Clp), partial;
n=1; Apis mellifera|Rep: PREDICTED: similar to Putative
ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor (Endopeptidase Clp), partial -
Apis mellifera
Length = 222
Score = 163 bits (396), Expect = 3e-39
Identities = 76/117 (64%), Positives = 93/117 (79%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
++P+VVEQT RGERA+DIYSRLL+ERII L GP+ D ++SLI AQLL+L+S + KK +
Sbjct: 106 LVPMVVEQTSRGERAFDIYSRLLKERIIFLTGPVYDQVASLISAQLLYLESVNPKKEISF 165
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
YINSPGG V+AGL IYDTMQYI P++T C+GQA SM SLLL G P R ALPN+R
Sbjct: 166 YINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLCGGEPNNRFALPNAR 222
>UniRef50_Q59993 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=166; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit 2 - Synechocystis sp.
(strain PCC 6803)
Length = 226
Score = 163 bits (396), Expect = 3e-39
Identities = 78/125 (62%), Positives = 95/125 (76%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
++P+VVEQ+G GERA+DIYSRLLRERII L P++D ++ IVAQLLFL +E +K + L
Sbjct: 23 VVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 82
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
YINSPGG+V AGL IYDTMQ I P + T C G A SM + LL+ G G R ALP+SRIMI
Sbjct: 83 YINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMI 142
Query: 646 HQPSG 660
HQP G
Sbjct: 143 HQPLG 147
>UniRef50_Q8YQX8 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=79; cellular organisms|Rep: ATP-dependent
Clp protease proteolytic subunit 2 - Anabaena sp.
(strain PCC 7120)
Length = 232
Score = 163 bits (396), Expect = 3e-39
Identities = 78/125 (62%), Positives = 97/125 (77%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
++P+VVEQ+G GERA+DIYSRLLRERII L PI+D +++ IVAQLLFL +E S+K + L
Sbjct: 29 IVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQL 88
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
YINSPGG+V AG+ IYDT+Q I P + T C G A SM + LL AG G R +LP+SRIMI
Sbjct: 89 YINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIMI 148
Query: 646 HQPSG 660
HQP G
Sbjct: 149 HQPLG 153
>UniRef50_A4R250 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Pezizomycotina|Rep: ATP-dependent Clp
protease proteolytic subunit - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 274
Score = 156 bits (379), Expect = 4e-37
Identities = 80/165 (48%), Positives = 110/165 (66%), Gaps = 3/165 (1%)
Frame = +1
Query: 175 TMALSSIGRVG--RRLCVGITNVYNVTRQINTSLPKLLGM-IPIVVEQTGRGERAYDIYS 345
T S+ RV +R + ++N R + S P G+ +P+V E T G R DI+S
Sbjct: 12 TRGAPSVSRVAACQRASLNLSNA----RSFSHSRPPQAGVPMPLVTEVTAGGWRTSDIFS 67
Query: 346 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 525
+LL+ERI+CL GPI+D + + AQLL+L+ +S KP+ LYINSPGG V++GL IYDTM
Sbjct: 68 KLLQERIVCLNGPIDDWTQASVTAQLLWLEQDSPHKPITLYINSPGGQVSSGLAIYDTMN 127
Query: 526 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
YI+ P+ T CVG A SM ++LL GA G R+ALP+S+IM+HQP G
Sbjct: 128 YISSPVHTVCVGMAASMGAILLLGGAAGQRYALPHSQIMVHQPLG 172
>UniRef50_Q8DST7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=37; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Streptococcus mutans
Length = 196
Score = 153 bits (371), Expect = 4e-36
Identities = 68/125 (54%), Positives = 96/125 (76%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
MIP+V+EQT RGER+YDIYSRLL++RII L GP+ D++++ I+AQLLFL ++ + K ++L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
YINSPGG+V+AGL I DTM +I + T +G A SM +++ ++GA G R LPN+ +I
Sbjct: 61 YINSPGGSVSAGLAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 646 HQPSG 660
HQP G
Sbjct: 121 HQPMG 125
>UniRef50_Q2UPZ9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=7; Eurotiomycetidae|Rep: ATP-dependent Clp
protease proteolytic subunit - Aspergillus oryzae
Length = 267
Score = 148 bits (359), Expect = 1e-34
Identities = 67/102 (65%), Positives = 84/102 (82%)
Frame = +1
Query: 355 RERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYIT 534
+ERIICL G +++ +S+ IVAQLLFL++++ +KP+HLYINSPGG+VTAGL IYDTM YI
Sbjct: 79 QERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIA 138
Query: 535 PPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
P++T CVGQA SM SLLL G PG R+ LP+S IMIHQPSG
Sbjct: 139 SPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSIMIHQPSG 180
>UniRef50_UPI0000D9E9DE Cluster: PREDICTED: ClpP caseinolytic
peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli); n=1; Macaca mulatta|Rep: PREDICTED: ClpP
caseinolytic peptidase, ATP-dependent, proteolytic
subunit homolog (E. coli) - Macaca mulatta
Length = 270
Score = 144 bits (349), Expect = 2e-33
Identities = 71/126 (56%), Positives = 88/126 (69%)
Frame = +1
Query: 250 RQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLF 429
R ++ + + L +IPIVVEQTGRGERAYDIYSRLLRERI+C+MGPI+D ++SL++AQLLF
Sbjct: 46 RSLHATAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLF 105
Query: 430 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 609
LQSES+KKP+H+YINSPG A LG Q T GQ CS++ A PG
Sbjct: 106 LQSESNKKPIHMYINSPGEQAGAFLGARGACQGARVTQGTRIPGQGCSLSGKGCRASDPG 165
Query: 610 MRHALP 627
R LP
Sbjct: 166 GRARLP 171
>UniRef50_Q82NZ3 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=8; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit 2 - Streptomyces avermitilis
Length = 200
Score = 136 bits (330), Expect = 3e-31
Identities = 62/123 (50%), Positives = 94/123 (76%)
Frame = +1
Query: 289 IPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLY 468
IP VVE+T +GER+YD++SRLL ERII L I+D ++++++AQLL L+S + + + +Y
Sbjct: 6 IPNVVERTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESANPEHEIAIY 65
Query: 469 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 648
INSPGG+ T+ + IYDTM ++ PI+T+CVGQA S A++LLA G PG R L ++R+++
Sbjct: 66 INSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 649 QPS 657
QP+
Sbjct: 126 QPA 128
>UniRef50_Q9ZH58 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=67; Actinobacteria (class)|Rep:
ATP-dependent Clp protease proteolytic subunit 2 -
Streptomyces coelicolor
Length = 218
Score = 134 bits (324), Expect = 2e-30
Identities = 64/123 (52%), Positives = 88/123 (71%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
+IP VE+T +G R YD Y++L ER+I L I+D ++ ++AQLL L+S + + +
Sbjct: 19 VIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 78
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
YINSPGG+ TA IYDTMQY+ P + T C+GQA S A++LLAAG PG R ALPN+R++I
Sbjct: 79 YINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLI 138
Query: 646 HQP 654
HQP
Sbjct: 139 HQP 141
>UniRef50_Q70AH6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Oenococcus oeni|Rep: ATP-dependent Clp
protease proteolytic subunit - Oenococcus oeni
(Leuconostoc oenos)
Length = 202
Score = 133 bits (322), Expect = 3e-30
Identities = 60/125 (48%), Positives = 87/125 (69%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
M P V+EQT G +YD+ SRLL++RII + G + D +++ IVAQLLFL ++ K +++
Sbjct: 1 MWPGVIEQTANGRESYDLPSRLLKDRIILVQGEVEDQMATSIVAQLLFLDAQDPNKDIYM 60
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
YINSPGG+VTAG+ I DTM +I + T +G A SMA+++ ++G G R LPN+ +I
Sbjct: 61 YINSPGGSVTAGMAIVDTMNFIRSDVQTIVMGMAASMATIIASSGTKGKRFMLPNAEYLI 120
Query: 646 HQPSG 660
HQP G
Sbjct: 121 HQPMG 125
>UniRef50_Q7MX09 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=23; Bacteroidetes|Rep: ATP-dependent Clp
protease proteolytic subunit - Porphyromonas gingivalis
(Bacteroides gingivalis)
Length = 222
Score = 131 bits (316), Expect = 2e-29
Identities = 64/123 (52%), Positives = 84/123 (68%)
Frame = +1
Query: 292 PIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYI 471
P ++E+ D++SRL+ +RII L I+D +++I AQLL+L S K + +Y+
Sbjct: 32 PTIIEERQLNVAQMDVFSRLMMDRIIFLGTQIDDYTANVIQAQLLYLDSADPGKDISIYL 91
Query: 472 NSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 651
NSPGG+V AG GIYDTMQYI +AT C G A SMAS+LL AG G R ALP+SR+MIHQ
Sbjct: 92 NSPGGSVYAGYGIYDTMQYIGCDVATICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQ 151
Query: 652 PSG 660
P G
Sbjct: 152 PLG 154
>UniRef50_Q7UK67 Cluster: ATP-dependent Clp protease proteolytic
subunit 1; n=2; Planctomycetaceae|Rep: ATP-dependent Clp
protease proteolytic subunit 1 - Rhodopirellula baltica
Length = 227
Score = 130 bits (315), Expect = 2e-29
Identities = 62/118 (52%), Positives = 86/118 (72%)
Frame = +1
Query: 307 QTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGG 486
Q+ + +R + LL RI+ + G I+ ++ IV +LL+LQSE+ +K +HLYINSPGG
Sbjct: 36 QSYQRQRQMTLGDLLLENRIVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPGG 95
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
+VTA L IYDTMQ ++ P+AT+CVG+ACS A++LL GA G R LPNSR+M+HQP G
Sbjct: 96 SVTATLAIYDTMQMLSCPVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRVMMHQPLG 153
>UniRef50_Q9FCC9 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit-like; n=2; Streptomyces|Rep:
Putative ATP-dependent Clp protease proteolytic
subunit-like - Streptomyces coelicolor
Length = 211
Score = 127 bits (307), Expect = 2e-28
Identities = 57/129 (44%), Positives = 89/129 (68%)
Frame = +1
Query: 271 PKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSK 450
P ++P E+T G R D YS+LL+ERI+ L P+++ ++ + AQL++L+ ++
Sbjct: 4 PSARHVLPEFTERTSAGTRTSDPYSKLLQERIVFLGTPVDETSANDVTAQLMYLEHQAPD 63
Query: 451 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPN 630
+ + LY+NSPGG+ TA IYDTM+Y+ +AT C+GQA A++LLAAG PG R ALP
Sbjct: 64 RDIELYVNSPGGSFTAMTAIYDTMRYVACDVATTCLGQAGPSAAVLLAAGTPGKRAALPG 123
Query: 631 SRIMIHQPS 657
+R+++HQP+
Sbjct: 124 ARVVLHQPA 132
>UniRef50_P56317 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=17; Viridiplantae|Rep: ATP-dependent Clp
protease proteolytic subunit - Chlorella vulgaris (Green
alga)
Length = 201
Score = 123 bits (297), Expect = 3e-27
Identities = 53/109 (48%), Positives = 78/109 (71%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+Y+RL RER++ L ++D++++ ++ +L+L +E K +++YINSPGG+VT G+ +Y
Sbjct: 22 DLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVY 81
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
D M YI + T CVG A SMAS +LA G G R ALP+SRIM+HQP G
Sbjct: 82 DAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPEG 130
>UniRef50_Q300E3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Streptococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Streptococcus suis
89/1591
Length = 147
Score = 121 bits (292), Expect = 1e-26
Identities = 52/95 (54%), Positives = 74/95 (77%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHL 465
MIP+V+EQT RGER+YDIYSRLL++RII L GP+ D++++ I+AQLLFL ++ K ++L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYL 60
Query: 466 YINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 570
Y+N+PGG+V+AGL I DTM +I + T +G C
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGTGC 95
>UniRef50_A7PR54 Cluster: Chromosome chr14 scaffold_26, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_26, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 320
Score = 121 bits (292), Expect = 1e-26
Identities = 55/109 (50%), Positives = 78/109 (71%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D + LLR+RI+ L ++D + L+++QLLFL +E +K + L+INSPGG+VTAGLGIY
Sbjct: 81 DTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIY 140
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
D M+ ++T C+G A SM + LLA+G+ G R +PNSR+MIHQP G
Sbjct: 141 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLG 189
>UniRef50_Q9MUV8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=9; Viridiplantae|Rep: ATP-dependent Clp
protease proteolytic subunit - Mesostigma viride
Length = 229
Score = 121 bits (291), Expect = 2e-26
Identities = 53/128 (41%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAY-DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKP 456
+G+ + G Y D+Y+RL RERI+ L ++D++++ ++ ++FL SE K
Sbjct: 3 IGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDTKG 62
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
+ YINSPGG++ AGLG+YD +Q++ + T C+G A SMAS +LA G PG R P++R
Sbjct: 63 IFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPHAR 122
Query: 637 IMIHQPSG 660
+M+HQP G
Sbjct: 123 VMLHQPMG 130
>UniRef50_Q7NEW1 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=23; Cyanobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit 2 - Gloeobacter violaceus
Length = 218
Score = 118 bits (285), Expect = 9e-26
Identities = 56/111 (50%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG--GAVTAGLG 507
D+ S LL ERI+ L PIND ++ L++AQLL+L+SE + KP+ +YINSPG G T+
Sbjct: 28 DLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVAGFETSAFA 87
Query: 508 IYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
+YDTM+++ PI T C+G A ++LL+AAG G R +LPNSRI+++QP G
Sbjct: 88 VYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYG 138
>UniRef50_O82421 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=11; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 310
Score = 118 bits (283), Expect = 2e-25
Identities = 51/109 (46%), Positives = 79/109 (72%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D + LLR+RI+ L ++D + L+++QLL L +E S++ + L+INSPGG++TAG+GIY
Sbjct: 86 DTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIY 145
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
D M+ ++T C+G A SM + LLA+G+ G R+ +PNS++MIHQP G
Sbjct: 146 DAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLG 194
>UniRef50_A7AQC7 Cluster: ATP-dependent Clp protease proteolytic
subunit, putative; n=2; Babesia bovis|Rep: ATP-dependent
Clp protease proteolytic subunit, putative - Babesia
bovis
Length = 245
Score = 118 bits (283), Expect = 2e-25
Identities = 57/126 (45%), Positives = 91/126 (72%), Gaps = 2/126 (1%)
Frame = +1
Query: 289 IPIVVEQTGRGERA--YDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVH 462
+P+V + +R+ +DI++RL RERI+ + +++ +++I+ LL L S+S++KP+
Sbjct: 51 VPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSNEKPIT 110
Query: 463 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 642
LYINS GG TAG+ +YDT++++ IAT VG + ASLLLA+G PGMR ALP+SR++
Sbjct: 111 LYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALPHSRVV 170
Query: 643 IHQPSG 660
+HQP+G
Sbjct: 171 MHQPAG 176
>UniRef50_Q2J9A8 Cluster: ATP-dependent Clp protease proteolytic
subunit 4; n=89; Bacteria|Rep: ATP-dependent Clp
protease proteolytic subunit 4 - Frankia sp. (strain
CcI3)
Length = 238
Score = 117 bits (282), Expect = 2e-25
Identities = 56/117 (47%), Positives = 78/117 (66%)
Frame = +1
Query: 310 TGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGA 489
+G G ++SRLL RI+ L + D +++ I A+LL L +E ++LYINSPGG+
Sbjct: 26 SGLGSADDQVFSRLLENRIVFLGSVVEDAVANAISAKLLLLAAEDPAADIYLYINSPGGS 85
Query: 490 VTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
V+AG+ IYDTMQY+ +AT +G A SM LL AG G R+ALP++RIM+HQP G
Sbjct: 86 VSAGMAIYDTMQYVGNDVATVALGLAGSMGQFLLCAGTAGKRYALPHARIMMHQPHG 142
>UniRef50_A4RXD2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 319
Score = 116 bits (279), Expect = 5e-25
Identities = 52/107 (48%), Positives = 74/107 (69%)
Frame = +1
Query: 340 YSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDT 519
+ LLR RI+ L ++D + +++QLL L + K + L+INSPGG+VTAG+GIYD
Sbjct: 101 FDSLLRNRIVFLGSQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAGMGIYDA 160
Query: 520 MQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
MQ+ P++T C+G A SM + LLA+G G R ++PN+RIMIHQP G
Sbjct: 161 MQFCRAPVSTVCLGLAASMGAFLLASGEKGRRMSMPNARIMIHQPLG 207
>UniRef50_Q36863 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Cyanophora paradoxa|Rep: ATP-dependent Clp
protease proteolytic subunit - Cyanophora paradoxa
Length = 194
Score = 114 bits (275), Expect = 2e-24
Identities = 54/104 (51%), Positives = 75/104 (72%)
Frame = +1
Query: 343 SRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTM 522
S+LL+ RII ++D+I + IV QLL+L++E S K + L+INSPGG+VTAGL +YDT+
Sbjct: 22 SKLLQNRIILFSQTVDDEICNSIVGQLLYLENEDSTKDIRLFINSPGGSVTAGLSVYDTI 81
Query: 523 QYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
Q ++ ++T C G A SM ++LLAAG R A +SRIMIHQP
Sbjct: 82 QNLSVDVSTICFGLAASMGAVLLAAGVENKRFAFASSRIMIHQP 125
>UniRef50_P56772 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=39; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 196
Score = 114 bits (274), Expect = 2e-24
Identities = 52/127 (40%), Positives = 85/127 (66%), Gaps = 1/127 (0%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAY-DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKP 456
+G+ + G G+ ++ DIY+RL RER+ L ++ +IS+ +++ +++L E K
Sbjct: 3 IGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKD 62
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
++L+INSPGG V +G+ IYDTMQ++ P + T C+G A S+AS +L GA R A P++R
Sbjct: 63 LYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHAR 122
Query: 637 IMIHQPS 657
+MIHQP+
Sbjct: 123 VMIHQPA 129
>UniRef50_A1SKA5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Actinomycetales|Rep: ATP-dependent Clp
protease proteolytic subunit - Nocardioides sp. (strain
BAA-499 / JS614)
Length = 200
Score = 112 bits (270), Expect = 6e-24
Identities = 53/104 (50%), Positives = 75/104 (72%)
Frame = +1
Query: 346 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 525
RLL +RII L ++DDI++ + A+LL L +E + + LYINSPGG+V+AGL IYDTM+
Sbjct: 15 RLLHQRIIVLGQQVDDDIANKLCAELLLLSAEDPHRDIALYINSPGGSVSAGLAIYDTMR 74
Query: 526 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
I ++T +G A SM LL+AG PG R+ALP+SR+++HQ S
Sbjct: 75 LIPNDVSTLAMGLAASMGQFLLSAGTPGKRYALPHSRVLMHQGS 118
>UniRef50_A7ATV1 Cluster: ATP-dependent Clp protease proteolytic
subunit 1, putative; n=1; Babesia bovis|Rep:
ATP-dependent Clp protease proteolytic subunit 1,
putative - Babesia bovis
Length = 225
Score = 111 bits (267), Expect = 1e-23
Identities = 51/103 (49%), Positives = 71/103 (68%)
Frame = +1
Query: 352 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 531
+R R + L G +ND+ S ++ Q+ + E+ + + YINSPGG+V+AGL IYD +Q +
Sbjct: 44 IRTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSL 103
Query: 532 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
+ T C+GQA SM + LLAAGA G+R A+PNSRIMIHQP G
Sbjct: 104 KMRVETICIGQAASMGAFLLAAGAKGLRSAMPNSRIMIHQPLG 146
>UniRef50_Q72R01 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=5; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit 2 - Leptospira interrogans serogroup
Icterohaemorrhagiae serovarcopenhageni
Length = 197
Score = 107 bits (258), Expect = 2e-22
Identities = 50/107 (46%), Positives = 70/107 (65%)
Frame = +1
Query: 337 IYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYD 516
I L R I L GP+ D+ S +V +LL+L+ + K + YINSPGG VT+G+ ++D
Sbjct: 19 ISKNFLDHRKIFLWGPVTDESSKDLVGKLLYLEMKDPGKKITFYINSPGGVVTSGMTVFD 78
Query: 517 TMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
T++ I+ P+ T C+G A SM S+LLAAG G R PN ++MIHQPS
Sbjct: 79 TIKMISSPVHTVCMGMAASMGSVLLAAGTKGERSIWPNGKVMIHQPS 125
>UniRef50_Q50DZ1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Clostridium hathewayi|Rep: ATP-dependent
Clp protease proteolytic subunit - Clostridium hathewayi
Length = 139
Score = 107 bits (257), Expect = 2e-22
Identities = 46/84 (54%), Positives = 66/84 (78%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPV 459
+ ++P V+E T +GER+YD++SRLL++RII L +ND+ + L VAQ+LFL++E K +
Sbjct: 1 MSLVPNVIETTSKGERSYDLFSRLLKDRIIFLGEEVNDETARLAVAQMLFLEAEDPSKDI 60
Query: 460 HLYINSPGGAVTAGLGIYDTMQYI 531
YINSPGG++TAGL IYDTM+YI
Sbjct: 61 SFYINSPGGSITAGLAIYDTMRYI 84
>UniRef50_Q98RW7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=17; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Guillardia theta
(Cryptomonas phi)
Length = 254
Score = 106 bits (255), Expect = 4e-22
Identities = 56/117 (47%), Positives = 75/117 (64%), Gaps = 9/117 (7%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 486
D+ S LL RI+ L P+ ++ LIVA+ L+LQ E+S+KPV++Y+NS G G
Sbjct: 59 DLPSLLLHNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVYMYLNSTGTSNPDGSSAG 118
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
T I DTM YI PP+ T CVGQA ++LL++G PG R ALPN+ IMIHQP+
Sbjct: 119 FETEAFAIADTMNYIKPPVHTICVGQAFGTCAMLLSSGEPGQRAALPNATIMIHQPT 175
>UniRef50_Q4UIN3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Theileria|Rep: ATP-dependent Clp protease
proteolytic subunit - Theileria annulata
Length = 215
Score = 102 bits (245), Expect = 7e-21
Identities = 52/119 (43%), Positives = 79/119 (66%), Gaps = 10/119 (8%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
DI++RL RERI+ + P++D+ + ++A +L L +E+S+KP+ LYINSPGG + AGL +Y
Sbjct: 24 DIHNRLFRERILFVSQPLDDEYVNQLIAAILCLDNETSEKPITLYINSPGGNMHAGLSLY 83
Query: 514 DTM----------QYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
DT+ Q++ I T VG S A+LLL +G PG R+ L +SR+++ QPSG
Sbjct: 84 DTLEVKTNKDKFNQHVRSEIVTINVGLCASTATLLLGSGTPGKRYGLQHSRVLLLQPSG 142
>UniRef50_Q06R14 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Jasminum|Rep: ATP-dependent Clp protease
proteolytic subunit - Jasminum leratii
Length = 261
Score = 101 bits (241), Expect = 2e-20
Identities = 50/108 (46%), Positives = 73/108 (67%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+Y++L + I+ L I +++ I+A +L+L + + ++ +INSPGGAV GL IY
Sbjct: 57 DLYTKLYQLGILFLGEEIEFVVANEIIAAMLYLNMQDPLQRLYFFINSPGGAVHDGLAIY 116
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
D M+YI I T C GQA SMAS+LLA+GA G R A P+S +M+HQP+
Sbjct: 117 DAMKYIDQEIHTICYGQAASMASVLLASGAKGHRGAYPHSMVMMHQPA 164
>UniRef50_Q93ZD4 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 279
Score = 100 bits (240), Expect = 3e-20
Identities = 46/109 (42%), Positives = 72/109 (66%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
DI++ L RER+I + I+++ S+ I+A +L+L + + +++Y+N PGG +T L IY
Sbjct: 89 DIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDGSRRIYMYLNGPGGDLTPSLAIY 148
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
DTM+ + P+ T CVG A ++A LLAAG G R A+P SRI + P+G
Sbjct: 149 DTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAG 197
>UniRef50_A7CRR7 Cluster: Endopeptidase Clp; n=1; Opitutaceae
bacterium TAV2|Rep: Endopeptidase Clp - Opitutaceae
bacterium TAV2
Length = 248
Score = 100 bits (239), Expect = 4e-20
Identities = 47/106 (44%), Positives = 67/106 (63%)
Frame = +1
Query: 337 IYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYD 516
I + L +R I L G + D+ + I +LL+L++ + K + YINSPGG++TAG+ IYD
Sbjct: 73 IQKKFLEQRKIFLWGAVTDESAKDITERLLYLEAIAPGKDITFYINSPGGSITAGMAIYD 132
Query: 517 TMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
TMQ I+ PI G A SM S+LL+ G R P+SR++IHQP
Sbjct: 133 TMQLISSPITVVVTGMAASMGSILLSGAPKGRRFLYPHSRVLIHQP 178
>UniRef50_Q9FHJ7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=11; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 301
Score = 99.1 bits (236), Expect = 8e-20
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 9/128 (7%)
Frame = +1
Query: 304 EQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG 483
E RG + D+ LLRERI+ L I+D ++ I++QLL L ++ KK + L+INSPG
Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128
Query: 484 GAV---------TAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
G++ +A + IYD +Q + ++T +G A S AS++L AG G R A+PN+R
Sbjct: 129 GSLRLNVVIVWFSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTR 188
Query: 637 IMIHQPSG 660
IMIHQP G
Sbjct: 189 IMIHQPLG 196
>UniRef50_Q4UAC9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Theileria|Rep: ATP-dependent Clp protease
proteolytic subunit - Theileria annulata
Length = 271
Score = 99.1 bits (236), Expect = 8e-20
Identities = 51/117 (43%), Positives = 72/117 (61%), Gaps = 14/117 (11%)
Frame = +1
Query: 352 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAG---------- 501
++ RII L G +ND +S I++ +L + K P+ YINSPGG+VT+G
Sbjct: 64 IKNRIIFLSGELNDKVSFKIISSILRINENDPKLPIKFYINSPGGSVTSGNFITQFLHTL 123
Query: 502 ----LGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
L I+D ++ + P+ T +GQA SM + LLA+G GMR+A+PNSRIMIHQP G
Sbjct: 124 FFLGLAIFDILRSLKMPVETISLGQAASMGAFLLASGTKGMRYAMPNSRIMIHQPLG 180
>UniRef50_O48891 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=9; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 271
Score = 98.3 bits (234), Expect = 1e-19
Identities = 46/107 (42%), Positives = 66/107 (61%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+ S L R RII + PIN ++ +++QL+ L S K + +Y+N PGG+ + L IY
Sbjct: 96 DLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLTIY 155
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
D M +I P + T G A S + LA G GMR+A+PN+R+MIHQP
Sbjct: 156 DCMSWIKPKVGTVAFGVAASQGAFFLAGGEKGMRYAMPNTRVMIHQP 202
>UniRef50_Q5Z0M5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Nocardia farcinica|Rep: ATP-dependent Clp
protease proteolytic subunit - Nocardia farcinica
Length = 201
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/104 (44%), Positives = 71/104 (68%)
Frame = +1
Query: 346 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 525
+LL RI+ L GP++DD +L+ QLL L +E+ + P+ L+I+SPGG+V A L I D M+
Sbjct: 17 QLLSRRILVLDGPLDDDNGTLLATQLLTLAAENDEAPISLWIHSPGGSVPAMLAIRDVMR 76
Query: 526 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
+ ++T +G ACS LL+AG+ G R ALP++R+++HQ S
Sbjct: 77 LVPCEVSTLALGLACSAGQFLLSAGSRGKRFALPHARVLMHQGS 120
>UniRef50_Q8LB10 Cluster: ATP-dependent Clp protease proteolytic
subunit ClpR4, putative; n=7; Magnoliophyta|Rep:
ATP-dependent Clp protease proteolytic subunit ClpR4,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 305
Score = 97.9 bits (233), Expect = 2e-19
Identities = 54/115 (46%), Positives = 69/115 (60%), Gaps = 8/115 (6%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG--------GA 489
D+ S L + RI+ L + ++ LI+A+ L+LQ E +KP++LYINS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 490 VTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
T IYD M Y+ PPI T CVG A A+LLL AGA G R ALP+S IMI QP
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQP 219
>UniRef50_A0LYF8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Bacteroidetes|Rep: ATP-dependent Clp
protease proteolytic subunit - Gramella forsetii (strain
KT0803)
Length = 186
Score = 97.5 bits (232), Expect = 2e-19
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = +1
Query: 295 IVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYIN 474
++ +TG+ + D ++LL +R I + G ++D + ++ +L +L E + + L+IN
Sbjct: 3 LMKNKTGKIQDLID--NKLLEKRKIYMWGEVSDKTAKYVIDRLEYLDLEGDGE-IQLFIN 59
Query: 475 SPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
SPGG VT G IYDT+ + P++T C G A SM S+LL+AG G R P++++MIHQP
Sbjct: 60 SPGGYVTDGFAIYDTIMSLESPVSTICTGLAASMGSILLSAGKKGRRFIQPHAKVMIHQP 119
Query: 655 SG 660
SG
Sbjct: 120 SG 121
>UniRef50_Q00TD8 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit; n=1; Ostreococcus tauri|Rep:
Putative ATP-dependent Clp protease proteolytic subunit
- Ostreococcus tauri
Length = 292
Score = 97.1 bits (231), Expect = 3e-19
Identities = 48/109 (44%), Positives = 70/109 (64%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
DI++ L RERII + I++++ + +VA +LFL S KP++LYI S GG + + I
Sbjct: 114 DIWNCLYRERIIWIGQTIDEELGNQLVATMLFLDSVDRNKPMYLYITSEGGQIVPTMAIM 173
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
DTM+++ + T G A +M LLLA+G G R ALPN+ IM+H PSG
Sbjct: 174 DTMKHLKAEVGTVGFGSARAMGGLLLASGKKGKRAALPNTCIMLHHPSG 222
>UniRef50_A4RST7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 251
Score = 96.7 bits (230), Expect = 4e-19
Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 8/115 (6%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG--------GA 489
D+ S + +ERI+ L + ++ LI+A+LL+LQ E KKP+ LYINS G G
Sbjct: 70 DLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLYINSTGSSKDGQKYGY 129
Query: 490 VTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
T IYDT+QY++PP+ T VG A A++LLAAG+ G R ALP++ IM+ QP
Sbjct: 130 DTEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAAGSRGNRAALPSASIMLKQP 184
>UniRef50_A2XFV5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Oryza sativa (indica cultivar-group)|Rep:
ATP-dependent Clp protease proteolytic subunit - Oryza
sativa subsp. indica (Rice)
Length = 459
Score = 95.9 bits (228), Expect = 8e-19
Identities = 40/66 (60%), Positives = 54/66 (81%)
Frame = +1
Query: 463 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 642
+Y+NSPGG+VTAG+ I+DTM++I P ++T C+G A SM + LL+AG G R++LPNSRIM
Sbjct: 317 MYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIM 376
Query: 643 IHQPSG 660
IHQP G
Sbjct: 377 IHQPLG 382
>UniRef50_P26567 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=52; Streptophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Zea mays (Maize)
Length = 216
Score = 95.9 bits (228), Expect = 8e-19
Identities = 46/108 (42%), Positives = 69/108 (63%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+Y+ + RER + L I +I++ I +++L E + L+INS GG + +G+ I+
Sbjct: 22 DLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGNSDIFLFINSLGGWLISGMAIF 81
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
DTMQ +TP I T C+G A SMAS +L G P R A P++RIM+HQP+
Sbjct: 82 DTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPA 129
>UniRef50_Q9MTJ8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Oenothera elata subsp. hookeri|Rep:
ATP-dependent Clp protease proteolytic subunit -
Oenothera hookeri (Hooker's evening primrose)
Length = 249
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/107 (42%), Positives = 65/107 (60%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+Y+ L R R I L I+ ++++ I ++FL + + + ++ +INSPGG AGL IY
Sbjct: 28 DLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGLLIY 87
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
D MQY+ PP+ T +G SMAS LL G R PN R+MIHQP
Sbjct: 88 DAMQYVAPPVYTLGLGVLASMASFLLVGGETSKRLMGPNGRVMIHQP 134
>UniRef50_Q3LW65 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bigelowiella natans|Rep: ATP-dependent Clp
protease proteolytic subunit - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 93.5 bits (222), Expect = 4e-18
Identities = 48/99 (48%), Positives = 64/99 (64%)
Frame = +1
Query: 364 IICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPI 543
I+ L G ++D+I+ LI + LF +S + K + L INSPGG+VTAGL I D + Y+
Sbjct: 45 ILSLYGGVDDNIADLIFKKALFTKSVDNNKELTLLINSPGGSVTAGLKIMDALNYVKVRN 104
Query: 544 ATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
T C+ A SM + LLA+G+ R AL NSRIMIHQP G
Sbjct: 105 NTVCLALAASMGAFLLASGSRNYRQALLNSRIMIHQPLG 143
>UniRef50_A5KB90 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Plasmodium|Rep: ATP-dependent Clp protease
proteolytic subunit - Plasmodium vivax
Length = 375
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/109 (44%), Positives = 65/109 (59%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+ ++RII L IN + +++QLL+L S + + +YINSPGG++ GL I
Sbjct: 187 DVKLFFFKKRIIYLTEEINKKTADELISQLLYLDS-LNHDDIKIYINSPGGSINEGLAIL 245
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
D YI I T G SMAS++LA+G G R +LPN RIMIHQP G
Sbjct: 246 DIFNYIQSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLG 294
>UniRef50_A6DMN5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent Clp protease proteolytic subunit -
Lentisphaera araneosa HTCC2155
Length = 196
Score = 91.1 bits (216), Expect = 2e-17
Identities = 41/103 (39%), Positives = 61/103 (59%)
Frame = +1
Query: 349 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQY 528
+L R I + I+ ++S +++QL+ L S K+P+++YINS GG +G IYD +Q+
Sbjct: 23 MLDTRTIIIAEEISPELSRRVLSQLILLNKRSEKEPIYVYINSGGGCADSGFTIYDMLQF 82
Query: 529 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
P+ T C G S A L+ A G +LPNSR M+HQPS
Sbjct: 83 FKAPVFTVCSGMCASAAILIFLAAKKGKNFSLPNSRFMLHQPS 125
>UniRef50_O97252 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Plasmodium|Rep: ATP-dependent Clp protease
proteolytic subunit - Plasmodium falciparum (isolate
3D7)
Length = 370
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/109 (43%), Positives = 65/109 (59%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+ ++RII L IN + +++QLL+L + + + +YINSPGG++ GL I
Sbjct: 186 DVKLFFFKKRIIYLTDEINKKTADELISQLLYLDN-INHNDIKIYINSPGGSINEGLAIL 244
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
D YI I T G SMAS++LA+G G R +LPN RIMIHQP G
Sbjct: 245 DIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLG 293
>UniRef50_P48254 Cluster: Putative ATP-dependent Clp protease
proteolytic subunit-like; n=1; Cyanophora paradoxa|Rep:
Putative ATP-dependent Clp protease proteolytic
subunit-like - Cyanophora paradoxa
Length = 199
Score = 91.1 bits (216), Expect = 2e-17
Identities = 49/106 (46%), Positives = 65/106 (61%)
Frame = +1
Query: 337 IYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYD 516
I + LL ER+I L + S+ + LL+L+SE+S+KPV YINS G+YD
Sbjct: 22 INNALLNERVIFLCNYEDATDESIYIGMLLYLESENSQKPVSFYINSSITFPNLCFGLYD 81
Query: 517 TMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
T+ I I T C+G A M+SL+LAAG G R ALPNSRIM+ +P
Sbjct: 82 TILQIKADIVTICLGLAGGMSSLILAAGTKGQRFALPNSRIMMQEP 127
>UniRef50_Q06FP3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Pelargonium x hortorum|Rep: ATP-dependent
Clp protease proteolytic subunit - Pelargonium hortorum
(Common geranium)
Length = 219
Score = 89.8 bits (213), Expect = 5e-17
Identities = 43/107 (40%), Positives = 66/107 (61%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+Y+RL R+R + L + +++++ IV ++ L E LYIN GG + GL +Y
Sbjct: 37 DLYNRLYRQRWLFLGKDLEEEVANNIVGLMIHLNIEDPFWTQTLYINCLGGLIIPGLALY 96
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
DT+ ++ P + T C+G A SMAS++L G R A PN+R+MIHQP
Sbjct: 97 DTIGFVEPDVKTICLGIAASMASVVLVGGTVTERCAFPNARVMIHQP 143
>UniRef50_A5BHP1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; cellular organisms|Rep: ATP-dependent Clp
protease proteolytic subunit - Vitis vinifera (Grape)
Length = 429
Score = 89.4 bits (212), Expect = 7e-17
Identities = 41/90 (45%), Positives = 62/90 (68%)
Frame = +1
Query: 322 ERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAG 501
ER + S+L + RII G ++DD++++IVAQLL+L + K + +Y+NSPGG+VTAG
Sbjct: 98 ERFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAG 157
Query: 502 LGIYDTMQYITPPIATWCVGQACSMASLLL 591
+ I+DTM++I P ++T CVG A L L
Sbjct: 158 MAIFDTMRHIRPDVSTVCVGLAARTVRLRL 187
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +1
Query: 550 WCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
W VG SM + LL+ G G R++LPNSRIMIHQP G
Sbjct: 317 WTVG---SMGAFLLSCGTKGKRYSLPNSRIMIHQPLG 350
>UniRef50_Q3LWG6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Bigelowiella natans|Rep: ATP-dependent Clp
protease proteolytic subunit - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 264
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/94 (42%), Positives = 59/94 (62%)
Frame = +1
Query: 379 GPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCV 558
G IND + + ++ +LFL + + + L INSPGG++ AGL +YD + + T +
Sbjct: 73 GEINDQLVNSLINSILFLSYKDNNSSIKLCINSPGGSIMAGLALYDAIVWTNKSTNTISL 132
Query: 559 GQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
G A SM + LLA+G G+R + PN+RIMIHQP G
Sbjct: 133 GLAASMGAFLLASGTNGLRFSTPNTRIMIHQPIG 166
>UniRef50_Q9PJW1 Cluster: ATP-dependent Clp protease proteolytic
subunit 1; n=9; Chlamydiales|Rep: ATP-dependent Clp
protease proteolytic subunit 1 - Chlamydia muridarum
Length = 192
Score = 87.0 bits (206), Expect = 4e-16
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +1
Query: 334 DIYSR-LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGI 510
DI R LL R I P+ + ++ + +L +L+ S +P+ INSPGG+V AG +
Sbjct: 12 DIIDRKLLDSRRIFFSEPVTEKSAAEAIKKLWYLELTSPGQPIVFVINSPGGSVDAGFAV 71
Query: 511 YDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
+D ++ I+ P+ T G A SM S+L APG R A P++RIMIHQPS
Sbjct: 72 WDQIKMISSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHARIMIHQPS 120
>UniRef50_Q1PYX1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
ATP-dependent Clp protease proteolytic subunit -
Candidatus Kuenenia stuttgartiensis
Length = 208
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/108 (36%), Positives = 67/108 (62%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D+ +RLL+ R I + +N ++ ++ QLL L++++ + + ++INSPGG AG +Y
Sbjct: 30 DLIARLLKTRTIIVTDEVNKKMAERVITQLLLLEADNDED-IRVFINSPGGDADAGFAMY 88
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
D ++++ P I C G S A ++L R++LP+SRI+IHQPS
Sbjct: 89 DMLRFVKPKIKAICSGVVASAAVIILLGAKKEDRYSLPSSRILIHQPS 136
>UniRef50_O84003 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=3; Treponema|Rep: ATP-dependent Clp
protease proteolytic subunit 2 - Treponema pallidum
Length = 199
Score = 85.8 bits (203), Expect = 8e-16
Identities = 42/105 (40%), Positives = 62/105 (59%)
Frame = +1
Query: 340 YSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDT 519
+ + L R I L G I+ D++ IV QL L+S S KP+++Y++SPGG V AG I+D
Sbjct: 21 FQKFLETRQILLSGEISKDLAEGIVRQLFVLESLSVSKPIYMYVDSPGGDVDAGYAIFDV 80
Query: 520 MQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
++++ P+ T +G S L+L A R L NSR +IHQP
Sbjct: 81 IRFVKTPVYTIGMGLVASAGVLVLLAAKKDCRFGLRNSRYLIHQP 125
>UniRef50_A5K0N3 Cluster: ATP-dependent Clp protease proteolytic
subunit, putative; n=6; Plasmodium|Rep: ATP-dependent
Clp protease proteolytic subunit, putative - Plasmodium
vivax
Length = 1104
Score = 82.2 bits (194), Expect = 1e-14
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Frame = +1
Query: 322 ERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG------ 483
+ I S LL +RII L P+ IS I++QLL+L+ ES +KP+HLYINS G
Sbjct: 60 QHGISIPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNK 119
Query: 484 ----GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 651
+T + I D + YI+ + T+C+G+A ++ +L ++G G R +L NS ++Q
Sbjct: 120 IINLNGMTDVISIIDVIDYISSDVYTYCLGKAYGISCILASSGKKGFRFSLKNSSFCLNQ 179
>UniRef50_Q5FQT4 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=19; Proteobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit 2 - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 223
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
++ RL +R + + G IND I+ + +LL L +S KP+ +Y+NSPGG V +G I+
Sbjct: 44 ELEGRLFDQRKVLIFGGINDKIARDVTGRLLALAG-TSDKPIDVYVNSPGGHVESGDTIH 102
Query: 514 DTMQYITP--PIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
D ++++ PI G S +L+ AAG P R LPN+R ++HQP G
Sbjct: 103 DMIRFVDSIAPINMIGTGWVASAGALIYAAGRPERRVCLPNTRFLLHQPMG 153
>UniRef50_Q5IX12 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Prototheca wickerhamii|Rep: ATP-dependent
Clp protease proteolytic subunit - Prototheca
wickerhamii
Length = 251
Score = 78.6 bits (185), Expect = 1e-13
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Frame = +1
Query: 319 GERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG----- 483
G D+ S LL RI + P+ ++ L++++LL+L S KPV++YINS G
Sbjct: 138 GRAPPDLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYINSTGSQREG 197
Query: 484 ----GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNS 633
G T I DTM YI P I T +GQAC A++LLA+G G R ALP+S
Sbjct: 198 GESVGFETEATAIMDTMAYIRPDIYTLVIGQACGNAAMLLASGKKGHRFALPHS 251
>UniRef50_A4RSQ9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 308
Score = 78.6 bits (185), Expect = 1e-13
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 486
D+ S LL RI+ + P+ ++ LIV++LL+LQ KKP ++YINS G G
Sbjct: 99 DLPSLLLDSRIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVG 158
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
T I+DTM+YI I T G A A +LL+AG G R+ P++ M+HQP
Sbjct: 159 FETEATAIFDTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQP 214
>UniRef50_Q67XY5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=8; Magnoliophyta|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 330
Score = 78.2 bits (184), Expect = 2e-13
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 9/116 (7%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 486
D+ S LL RI+ + P+ ++ L+VA+L++LQ K+P+++YINS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
+ G IYD++ + + T CVG A A LLL+AG G R +P+++ MI +P
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQRP 236
>UniRef50_Q2WGG1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Selaginella uncinata|Rep: ATP-dependent
Clp protease proteolytic subunit - Selaginella uncinata
(Blue spikemoss) (Peacock spikemoss)
Length = 206
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/108 (37%), Positives = 60/108 (55%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D ++R RER+ ++D+ ++ + E+ + H Y N PGGAV+AG+ +Y
Sbjct: 22 DTHNRPYRERLPSSGQHMDDETANQPIRITTHPNGENRSQDTHSYTNPPGGAVSAGISVY 81
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
DTMQ P + T VG A SM + G R ALP++R+MIHQP+
Sbjct: 82 DTMQSAVPDVHTIRVGLAASMGPSISTGGEITRRMALPHARVMIHQPA 129
>UniRef50_O51698 Cluster: ATP-dependent Clp protease proteolytic
subunit 2; n=3; Borrelia burgdorferi group|Rep:
ATP-dependent Clp protease proteolytic subunit 2 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 206
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = +1
Query: 349 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQY 528
+L+ R I + G I D+S L ++L L++ KKP+ +YI+S GG + AG I++ +++
Sbjct: 28 VLKSRSIVIAGEITKDVSRLFQEKILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRF 87
Query: 529 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
+ P + T VG S A+L+ A R +LP +R ++HQP
Sbjct: 88 VKPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQP 129
>UniRef50_A4S2Q5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 381
Score = 75.8 bits (178), Expect = 9e-13
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 9/116 (7%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 486
D+ S LL RI + + ++ L+VA+LL+L E ++KP ++YINS G G
Sbjct: 149 DLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEVVG 208
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
I DTM+YI P I T VG+ ASL+LAAG G RHALP+ +I P
Sbjct: 209 MDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQISTQPP 264
>UniRef50_A4S2U0 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ostreococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ostreococcus lucimarinus
CCE9901
Length = 210
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/124 (31%), Positives = 72/124 (58%)
Frame = +1
Query: 289 IPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLY 468
+P++V GRG D++ L R+RI+ L I++ +++ A+LL L+SE + + ++
Sbjct: 26 VPVMVPD-GRGG-GEDVFGALARDRIVFLGTRIDEQVAAETCARLLQLESEDPEGEIRVW 83
Query: 469 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 648
+N G I DTM+Y++ P++T +G +L+AAG G R+ + ++RI++
Sbjct: 84 VNCVAGTQYCVTAILDTMEYVSCPVSTVALGCVAGPPVMLVAAGDKGKRYGMSSARIVLS 143
Query: 649 QPSG 660
QP G
Sbjct: 144 QPLG 147
>UniRef50_UPI000050FD0C Cluster: COG0740: Protease subunit of
ATP-dependent Clp proteases; n=1; Brevibacterium linens
BL2|Rep: COG0740: Protease subunit of ATP-dependent Clp
proteases - Brevibacterium linens BL2
Length = 219
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/99 (36%), Positives = 56/99 (56%)
Frame = +1
Query: 361 RIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPP 540
R + G + D+ I+++L+ L +E S +HL+INSPGG+V I D ++ +
Sbjct: 44 RSVVFNGELRDENGMEIISRLILLSAEDSHSDIHLWINSPGGSVPMMHAIADVIETLPND 103
Query: 541 IATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
+ T G A S +L G PG R ALP++RI++HQ S
Sbjct: 104 VVTVAFGWAASAGQFVLMMGTPGKRLALPHARILLHQGS 142
>UniRef50_A4E7Q8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Collinsella aerofaciens ATCC 25986|Rep:
ATP-dependent Clp protease proteolytic subunit -
Collinsella aerofaciens ATCC 25986
Length = 205
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/121 (31%), Positives = 66/121 (54%)
Frame = +1
Query: 292 PIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYI 471
P+ + ++ RG IY +L R + +MG I ++ + Q+ L + +P+ +++
Sbjct: 11 PLTMRESARGITLTSIYDEMLARRELSVMGNIETPMAHDLCQQIRLLDATDPSRPITIFV 70
Query: 472 NSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 651
S GG+V +GL IYD M+ + PI T C+ A SM +++ G R A P++ +MIH
Sbjct: 71 ASAGGSVRSGLAIYDAMRLASCPIRTVCLEFAASMGAVIF-MGGDDCRMA-PHAELMIHD 128
Query: 652 P 654
P
Sbjct: 129 P 129
>UniRef50_P54414 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Alphaproteobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit - Paracoccus denitrificans
Length = 199
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/97 (37%), Positives = 58/97 (59%)
Frame = +1
Query: 367 ICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIA 546
+ + GPI D ++ VA LL L +E S +P+++ I+SPGG V +G I+D +++I P +
Sbjct: 33 VIVAGPITDKLAQRTVAHLLAL-AEDSDEPINMLISSPGGHVESGDMIHDVIKFIRPTVR 91
Query: 547 TWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
T + S +L+ R+ LPN+R +IHQPS
Sbjct: 92 TIGLAWVASAGALIFVGADKENRYCLPNTRFLIHQPS 128
>UniRef50_Q8Y7Y1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=14; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Listeria monocytogenes
Length = 190
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/105 (36%), Positives = 60/105 (57%)
Frame = +1
Query: 346 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 525
+L+ R + + G IN +++ + QLL L+S S+ P+ ++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 526 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
+I P + G S + A R +LPN+R MIHQP+G
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAG 120
>UniRef50_Q2SJI3 Cluster: ATP-dependent Clp protease, proteolytic
subunit ClpP; n=3; Bacteria|Rep: ATP-dependent Clp
protease, proteolytic subunit ClpP - Hahella chejuensis
(strain KCTC 2396)
Length = 194
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/119 (31%), Positives = 65/119 (54%)
Frame = +1
Query: 304 EQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG 483
E+ + +R + YS + R + + G +N +++ +L+ L +E S+ P+ + I+SPG
Sbjct: 9 EKGSKTDRIEEQYS--FKSRFVFIFGEVNHEMAQATCQRLIAL-AEDSEDPIRVLISSPG 65
Query: 484 GAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
G V +G I+D +++I P+ T G S + + A R LPN+R MIHQP G
Sbjct: 66 GHVESGDAIHDIIRFIRAPVITVGAGWVASAGTHIYLAAEKERRVCLPNTRFMIHQPGG 124
>UniRef50_Q06SH9 Cluster: Proteolytic subunit 2 of clp protease;
n=1; Stigeoclonium helveticum|Rep: Proteolytic subunit 2
of clp protease - Stigeoclonium helveticum (Green alga)
Length = 518
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +1
Query: 421 LLFLQSES---SKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLL 591
LLF++++ + V ++INS GG+V++G+ IYD +Q++ T C+G A S +S++L
Sbjct: 324 LLFMETQERLQEQSRVFVFINSTGGSVSSGITIYDALQFVKTGAVTVCLGMAFSASSMVL 383
Query: 592 AAGAPGMRHALPNSRIMIHQPSG 660
A G G R+ + +MIHQP G
Sbjct: 384 AGGNIGHRYVAEGAHVMIHQPEG 406
>UniRef50_Q9XJ35 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Arabidopsis thaliana|Rep: ATP-dependent
Clp protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 387
Score = 65.7 bits (153), Expect = 9e-10
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 486
D+ S LL RI L PI ++ L+VAQ ++L ++ KP++LYINSPG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
+ T I DT+ Y + T G A A++LL+ G G R P+S ++ P
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLP 286
>UniRef50_A7QL58 Cluster: Chromosome chr3 scaffold_117, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_117, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 388
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 486
D+ S LL RI L PI ++ L+VAQ ++L ++ KP++LYINS G G
Sbjct: 169 DLPSLLLDARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGTQNEKMETVG 228
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
+ T I D+M Y + T G A A++LL+ GA G R PN+ ++ P
Sbjct: 229 SETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQPNASTKLYLP 284
>UniRef50_Q4UBQ0 Cluster: ATP-dependent Clp protease proteolytic
subunit, putative; n=1; Theileria annulata|Rep:
ATP-dependent Clp protease proteolytic subunit, putative
- Theileria annulata
Length = 261
Score = 64.1 bits (149), Expect = 3e-09
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Frame = +1
Query: 388 NDDISSLIVAQLLFLQSESSKKPVHLYINSPG------GAVTA---GLGIYDTMQYITPP 540
N ++ L+++QLL+L +S KP+ +YINS G T+ L I D M Y+
Sbjct: 94 NSGVAHLVISQLLYLDYDSQDKPIKIYINSDNERSNEDGISTSEIDALNIVDVMNYLKNE 153
Query: 541 IATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 651
+ T +G+A A+L+LA+G PG R+ LP S ++ Q
Sbjct: 154 VITINLGKAYGPAALILASGTPGKRYVLPRSYTLLRQ 190
>UniRef50_P42380 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Chlorophyceae|Rep: ATP-dependent Clp
protease proteolytic subunit - Chlamydomonas reinhardtii
Length = 524
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +1
Query: 430 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 609
+Q E SKK V + INS GG+V G+ ++D +Q+I T +G A S ASL LA G G
Sbjct: 341 IQEEESKK-VFMIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIG 399
Query: 610 MRHALPNSRIMIHQPSG 660
R+ MIHQP G
Sbjct: 400 ERYVTEGCHTMIHQPEG 416
>UniRef50_Q6C1Y5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Yarrowia lipolytica|Rep: ATP-dependent Clp
protease proteolytic subunit - Yarrowia lipolytica
(Candida lipolytica)
Length = 157
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/47 (61%), Positives = 32/47 (68%)
Frame = +1
Query: 520 MQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
M YI P+ T C+GQA SMASLLL GAPG R PNS IM H+P G
Sbjct: 1 MNYIRSPVHTVCLGQAASMASLLLTCGAPGNRIMTPNSTIMTHEPLG 47
>UniRef50_P42379 Cluster: ATP-dependent Clp protease proteolytic
subunit (EC 3.4.21.92) (Endopeptidase Clp) [Contains:
Ceu clpP intein (Insertion IS2)]; n=1; Chlamydomonas
eugametos|Rep: ATP-dependent Clp protease proteolytic
subunit (EC 3.4.21.92) (Endopeptidase Clp) [Contains:
Ceu clpP intein (Insertion IS2)] - Chlamydomonas
eugametos
Length = 1010
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +1
Query: 433 QSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGM 612
Q E SKK V + INS GG+V G+ ++D +Q+I T +G A S ASL LA G G
Sbjct: 374 QEEESKK-VFVIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIGE 432
Query: 613 RHALPNSRIMIHQP 654
R+ +MIHQP
Sbjct: 433 RYVTEGCHVMIHQP 446
>UniRef50_A1WEU3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Verminephrobacter eiseniae EF01-2|Rep:
ATP-dependent Clp protease proteolytic subunit -
Verminephrobacter eiseniae (strain EF01-2)
Length = 229
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/99 (30%), Positives = 56/99 (56%)
Frame = +1
Query: 352 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 531
+ R + ++G I+ ++ V QL L S + P++++I+SPGG V +G I+D +++I
Sbjct: 24 INARKVFIIGTIDHKMAKEAVQQLHILASINDD-PIYVFISSPGGHVESGDLIFDAIRFI 82
Query: 532 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 648
TP + G S +L+ A R++LPN+ ++H
Sbjct: 83 TPKVIVVSSGWVASAGALIYVAADKENRYSLPNTHFLLH 121
>UniRef50_Q40943 Cluster: ATP-dependent clp protease proteolytic
subunit homolog; n=1; Bigelowiella natans|Rep:
ATP-dependent clp protease proteolytic subunit homolog -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 226
Score = 58.0 bits (134), Expect = 2e-07
Identities = 31/104 (29%), Positives = 55/104 (52%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
+I ++ + + I + G +ND +S I++ LLF ++ ++ + L +NS G +T + I
Sbjct: 45 EIAQKMSKTKSIFIYGYLNDSLSIQIISNLLFFNGKN-EQGISLILNSNGSNITDSININ 103
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
+ M YI P + T +G L+LA G R PN++I I
Sbjct: 104 ECMNYIYPEVYTVGIGNIMDSIILILANGKKDSRAIFPNAKISI 147
>UniRef50_A1K6N2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Betaproteobacteria|Rep: ATP-dependent Clp
protease proteolytic subunit - Azoarcus sp. (strain
BH72)
Length = 625
Score = 56.0 bits (129), Expect = 8e-07
Identities = 36/94 (38%), Positives = 53/94 (56%)
Frame = +1
Query: 373 LMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATW 552
++G I D + I+A+L + PV + INS GG+V AG+ IY+ ++ P +
Sbjct: 6 IIGEITDVTAREILAELAL----AGDSPVVVRINSQGGSVQAGVTIYEALKAHRPSVTVE 61
Query: 553 CVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
VG A S ASL+ AG P +R A P S +M+H P
Sbjct: 62 IVGWALSAASLIAMAGRP-VRMA-PTSLLMVHAP 93
>UniRef50_O04018 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; core eudicotyledons|Rep: ATP-dependent Clp
protease proteolytic subunit - Arabidopsis thaliana
(Mouse-ear cress)
Length = 292
Score = 54.4 bits (125), Expect = 2e-06
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDI---------SSLIVAQLLFLQSESSKKPVHLYINSPGG 486
D+ S LL RI+ + P +DDI + L+VA+L++LQ K+P+++YINS G
Sbjct: 121 DLPSMLLDGRIVYIGMPTDDDIFCFQLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGT 180
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
G ++ T CVG A A LLL+AG G R +P+++
Sbjct: 181 TRDDGETVH-----------TVCVGAAIGQACLLLSAGTKGKRFMMPHAK 219
>UniRef50_Q9PFZ5 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=4; Xylella fastidiosa|Rep: ATP-dependent Clp
protease proteolytic subunit - Xylella fastidiosa
Length = 752
Score = 52.8 bits (121), Expect = 7e-06
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Frame = +1
Query: 286 MIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDI--SSLIVAQLLFLQSESSKKPV 459
M P + R +++ ++ + L GPI D + A ++ S + +
Sbjct: 1 MTPAPMPPQARPPSVVALHASNPKQAELLLYGPIGDLFWEDGVTAASVIAQLSTVTAPLI 60
Query: 460 HLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRI 639
H+ INS GG V+ GL IY+ + I G A S+ASL+ AG R PNS +
Sbjct: 61 HVRINSNGGVVSDGLAIYNALTAHPATIHVTIDGVAASIASLIAQAGT--TRRVYPNSLM 118
Query: 640 MIHQP 654
MIH P
Sbjct: 119 MIHGP 123
>UniRef50_Q8ZQG9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=17; root|Rep: ATP-dependent Clp protease
proteolytic subunit - Salmonella typhimurium
Length = 728
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
++L+I+SPGG++ GL IY+ ++ + G ACSMAS++ G P + N+
Sbjct: 94 INLHIHSPGGSIFDGLAIYNLLKNHPARKVVYVDGVACSMASVIAMVGDPVIMP--ENAM 151
Query: 637 IMIHQPSG 660
+MIH+P G
Sbjct: 152 MMIHRPRG 159
>UniRef50_Q3LVU8 Cluster: Clp protease; n=1; Bigelowiella
natans|Rep: Clp protease - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 204
Score = 49.2 bits (112), Expect = 9e-05
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Frame = +1
Query: 322 ERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSP-----GG 486
++ YDI S++ + II + PIN I L+++Q++FL + ++IN+P
Sbjct: 31 KKFYDISSKIYEKNIIFIGQPINTFIVQLLISQVIFLFMNRKNEKNRIFINTPYQTKNNF 90
Query: 487 AVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 642
T+ L +Y+ +Q I +++ +G L+L++G R+ L NS ++
Sbjct: 91 LYTSDLYLYNFLQTIRFEYSSYNIGLCNYDIGLILSSGIKSNRYGLKNSIVL 142
>UniRef50_A2Y843 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Oryza sativa|Rep: ATP-dependent Clp
protease proteolytic subunit - Oryza sativa subsp.
indica (Rice)
Length = 398
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGER-----AYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSES 444
+GM + + + GRG R A D+ S LL RII L PI ++ LI AQ L+L +
Sbjct: 139 MGMGTMSMGRAGRGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDD 198
Query: 445 SKKPVHLYINSPG 483
KP++LYINS G
Sbjct: 199 RTKPIYLYINSTG 211
>UniRef50_Q1UAH7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Lactobacillus|Rep: ATP-dependent Clp
protease proteolytic subunit - Lactobacillus reuteri
100-23
Length = 258
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/75 (34%), Positives = 44/75 (58%)
Frame = +1
Query: 430 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 609
L+S K ++L+INSPGG+V G+ IY+ ++ + I + G A S+AS++ +G
Sbjct: 48 LKSLGDVKNINLHINSPGGSVFEGIAIYNMLKQNSAHINVYIDGLAASIASVIAMSGDAI 107
Query: 610 MRHALPNSRIMIHQP 654
+ NS +M+H P
Sbjct: 108 FMPS--NSMMMVHNP 120
>UniRef50_Q9T1F7 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus phage phiadh|Rep: Putative uncharacterized
protein - Lactobacillus phage phiadh
Length = 242
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 436 SESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMAS-LLLAAGAPGM 612
+E++ V L INSPGG V AG IY ++ + GQACS AS + LAA M
Sbjct: 40 NEANGSDVTLEINSPGGYVDAGSEIYTALKEYQGQVIAKITGQACSAASWIALAADRIEM 99
Query: 613 RHALPNSRIMIHQPS 657
P +++MIH+ S
Sbjct: 100 S---PTAQMMIHRAS 111
>UniRef50_Q4A301 Cluster: Putative ATP-dependent protease
proteolytic subunit; n=1; Emiliania huxleyi virus
86|Rep: Putative ATP-dependent protease proteolytic
subunit - Emiliania huxleyi virus 86
Length = 238
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
V LYI+S GG + AG + ++ P+ T G S A+ LL AG+ R+ +P+S
Sbjct: 105 VSLYIHSCGGDLFAGFSAFSLIRRNVIPVVTIADGYVASAATFLLLAGS--YRYIVPSSH 162
Query: 637 IMIHQPS 657
++IHQ S
Sbjct: 163 VLIHQLS 169
>UniRef50_Q01F40 Cluster: Clp protease 2 proteolytic subunit; n=1;
Ostreococcus tauri|Rep: Clp protease 2 proteolytic
subunit - Ostreococcus tauri
Length = 87
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +1
Query: 427 FLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI----TP--PIATWCVGQACSMASLL 588
+L + + + LYINSPGG+VTAG+ ++DTM+++ TP P C ++C
Sbjct: 3 YLAHSARCRDITLYINSPGGSVTAGMAVFDTMRHVHASLTPFSPTINLCC-KSCDPPRFA 61
Query: 589 LAAGAPGMRHALPNSRIMIHQ 651
L+ + R P I H+
Sbjct: 62 LSCNSRKKRKKRPLHEITSHE 82
>UniRef50_A7R7H5 Cluster: Chromosome undetermined scaffold_1785,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1785, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 150
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG 483
D+ S L + RI+ L + ++ LI+A+ L+LQ + ++KP++LYINS G
Sbjct: 73 DLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDDAEKPIYLYINSTG 122
>UniRef50_Q7P8G2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Fusobacterium nucleatum subsp. vincentii
ATCC 49256|Rep: ATP-dependent Clp protease proteolytic
subunit - Fusobacterium nucleatum subsp. vincentii ATCC
49256
Length = 344
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
++LYINSPGG+VT G IY ++ + GQ S+AS++ AG P +
Sbjct: 51 INLYINSPGGSVTEGCAIYSALKRHKAVKNVYIDGQCSSIASVIAMAG--DKIAMSPVAT 108
Query: 637 IMIHQP 654
+MIH P
Sbjct: 109 MMIHNP 114
>UniRef50_A7CYV1 Cluster: Peptidase S14 ClpP precursor; n=1;
Opitutaceae bacterium TAV2|Rep: Peptidase S14 ClpP
precursor - Opitutaceae bacterium TAV2
Length = 575
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +1
Query: 352 LRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYIN-SPGGAVTAGLGIYDTMQY 528
+ +R I L GPI+ + I ++ + +++++ P+ + I+ SPGG+V AG I M+
Sbjct: 339 ISDRRIPLNGPISMRTADRIQERIDYFNNQNTEYPIFIVIDASPGGSVMAGYKILKAMEG 398
Query: 529 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 651
P+ T A SMA+ + +A PN+ ++ HQ
Sbjct: 399 SAAPVYTVVKSFAASMAAGITTLSK--QSYAYPNAILLHHQ 437
>UniRef50_Q3EL78 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bacillus thuringiensis serovar israelensis
ATCC 35646|Rep: ATP-dependent Clp protease proteolytic
subunit - Bacillus thuringiensis serovar israelensis
ATCC 35646
Length = 244
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +1
Query: 448 KKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP 627
K +++Y+NS GG+V AGL IY+ ++ + G A S+AS++ AG R +P
Sbjct: 62 KSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGD---RVVVP 118
Query: 628 -NSRIMIHQP 654
N+ +M+H+P
Sbjct: 119 SNAFLMVHKP 128
>UniRef50_A3X5R0 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Roseobacter sp. MED193|Rep: ATP-dependent
Clp protease proteolytic subunit - Roseobacter sp.
MED193
Length = 326
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
+ L +NSPGG+V + IY+ ++ I W G A S AS + AG + N+
Sbjct: 45 IDLRLNSPGGSVFDAVAIYNALKRHAGEITVWIDGIAASAASYIAMAGDAIVMP--ENAF 102
Query: 637 IMIHQPSG 660
+MIH PSG
Sbjct: 103 LMIHDPSG 110
>UniRef50_A3EHW0 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Vibrio cholerae V51|Rep: ATP-dependent Clp
protease proteolytic subunit - Vibrio cholerae V51
Length = 292
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 451 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPN 630
KPV +YINSPGG + G+ I++ +Q + + +G A S AS++ A A R +
Sbjct: 74 KPVTVYINSPGGDMWEGIAIHNRLQEHSQKVTIKVIGIAASAASII--AMASDDRQIATS 131
Query: 631 SRIMIH 648
S +MIH
Sbjct: 132 SFLMIH 137
>UniRef50_Q4JLM3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Lactobacillus|Rep: ATP-dependent Clp
protease proteolytic subunit - Lactobacillus reuteri
Length = 223
Score = 42.7 bits (96), Expect = 0.008
Identities = 28/90 (31%), Positives = 42/90 (46%)
Frame = +1
Query: 385 INDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQ 564
++DD+S + L S+ P+ L++NSPGG TA IY + + G
Sbjct: 28 VHDDVSPQVFQDEL----NESQDPIDLWLNSPGGDCTAASQIYTMLMNYPNEVNVKISGI 83
Query: 565 ACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
A S AS++ AG P + +MIH P
Sbjct: 84 AASAASVIAMAGT--TVSMAPAAMLMIHNP 111
>UniRef50_A0IWL1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Serratia proteamaculans 568|Rep:
ATP-dependent Clp protease proteolytic subunit -
Serratia proteamaculans 568
Length = 365
Score = 42.7 bits (96), Expect = 0.008
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 391 DDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 570
DD++S VA L + K +H+ INS GG+V I T++ T + + G A
Sbjct: 34 DDVNSRDVATQL---KAVTSKEIHVKINSYGGSVFTAQAILSTLKRHTAAVTVFIDGIAA 90
Query: 571 SMASLLLAAGAPGMRHALP-NSRIMIHQP 654
S A+++ AG R +P N+ +MIH P
Sbjct: 91 SAATIIAMAGE---RVVIPSNAMMMIHNP 116
>UniRef50_Q65KG4 Cluster: Putative uncharacterized protein; n=1;
Bacillus licheniformis ATCC 14580|Rep: Putative
uncharacterized protein - Bacillus licheniformis (strain
DSM 13 / ATCC 14580)
Length = 248
Score = 41.5 bits (93), Expect = 0.017
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
+++YINSPGG+V G IY+ ++ + + G A S+AS++ +G A N+
Sbjct: 56 LNIYINSPGGSVFEGNSIYNIIKRHKAHVNVYVDGLAASIASVIAMSGDAIFMPA--NAM 113
Query: 637 IMIHQP 654
+MIH P
Sbjct: 114 MMIHNP 119
>UniRef50_Q3Z3P3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Enterobacteriaceae|Rep: ATP-dependent Clp
protease proteolytic subunit - Shigella sonnei (strain
Ss046)
Length = 381
Score = 41.5 bits (93), Expect = 0.017
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP-NS 633
+HL I+SPGG + GL IY+ ++ G A SMAS + G +P N+
Sbjct: 45 IHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGD---HIVMPENA 101
Query: 634 RIMIHQPSG 660
+MIH P G
Sbjct: 102 MMMIHAPRG 110
>UniRef50_A7FWE0 Cluster: Putative Clp protease; n=1; Clostridium
botulinum A str. ATCC 19397|Rep: Putative Clp protease -
Clostridium botulinum (strain ATCC 19397 / Type A)
Length = 252
Score = 41.5 bits (93), Expect = 0.017
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
+++YINSPGG+V G IY+ ++ I G A S+AS++ AG NS
Sbjct: 55 LNIYINSPGGSVFQGQAIYNIIKRHKAKINIHVDGVAASIASVIAMAG--NTIFMPKNSM 112
Query: 637 IMIHQP 654
+MIH P
Sbjct: 113 MMIHNP 118
>UniRef50_Q892G9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Firmicutes|Rep: ATP-dependent Clp protease
proteolytic subunit - Clostridium tetani
Length = 226
Score = 41.1 bits (92), Expect = 0.023
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = +1
Query: 430 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 609
L + + + + + INS GG+V AG IY ++ + VG A S AS++ AG
Sbjct: 35 LSNSKNNEGLEVEINSGGGSVFAGSEIYTLLKDYKGNVTVKIVGLAASAASVIAMAGDKV 94
Query: 610 MRHALPNSRIMIHQPSG 660
+ P +IMIH SG
Sbjct: 95 L--ISPTGQIMIHNASG 109
>UniRef50_Q6SZ10 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=12; Bacteria|Rep: ATP-dependent Clp protease
proteolytic subunit - Streptococcus pyogenes
Length = 228
Score = 41.1 bits (92), Expect = 0.023
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 358 ERIICLMGPINDD--ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 531
ER + L G I + + QL + S + + L+INSPGG V A IY+ +
Sbjct: 13 ERTLFLNGVIASESWFGDEVTPQLFKDELLSEQGDITLWINSPGGDVFAAAQIYNMLMDY 72
Query: 532 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
+ G A S AS++ AG + + P S +MIH P+
Sbjct: 73 KGAVTVNIDGIAASAASVIAMAGT--IVNMSPVSMMMIHNPA 112
>UniRef50_A7BZX9 Cluster: Secreted protein; n=2; Beggiatoa sp.
PS|Rep: Secreted protein - Beggiatoa sp. PS
Length = 476
Score = 41.1 bits (92), Expect = 0.023
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +1
Query: 349 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYIN-SPGGAVTAGLGIYDTMQ 525
++ +R I L G I ++ IV ++ + ++S++ P+ L I+ PGG+V G I M+
Sbjct: 247 IISDRKIVLDGIIWPGTANNIVERIQYYNNKSTEYPIFLVIDYCPGGSVMEGTRIVKAMK 306
Query: 526 YITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
P+ A SMA+++ +ALP++ I+ HQ G
Sbjct: 307 KSRAPVYVVVKALAASMAAVITTLA--DHSYALPDAIIVHHQVWG 349
>UniRef50_A1FMT8 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Pseudomonas putida W619|Rep: ATP-dependent
Clp protease proteolytic subunit - Pseudomonas putida
W619
Length = 620
Score = 41.1 bits (92), Expect = 0.023
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +1
Query: 454 PVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNS 633
P+ + INSPGG+VT L IY ++ T + T V C+ A+ L+A A + A +S
Sbjct: 26 PITVQINSPGGSVTDALAIYTVLRKHTGRV-TAIVDGLCASAATLVALAADEIVMA-EHS 83
Query: 634 RIMIHQP 654
+M+H P
Sbjct: 84 LMMVHNP 90
>UniRef50_A5C4G8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 443
Score = 41.1 bits (92), Expect = 0.023
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 481 GGAVTAGLGIYDTMQYITPPIATWCVGQA 567
GG VTAG+ I+DTM++I P + T CVG A
Sbjct: 218 GGXVTAGMAIFDTMRHIRPDVPTVCVGLA 246
>UniRef50_Q8ZSM4 Cluster: Protease IV, conjectural; n=2;
Pyrobaculum|Rep: Protease IV, conjectural - Pyrobaculum
aerophilum
Length = 608
Score = 41.1 bits (92), Expect = 0.023
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +1
Query: 250 RQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRLLRERIICLMG-PINDDISSLIVAQLL 426
+ +N+SL + L I +E+ + + + RE +I + PI D ++ +
Sbjct: 50 KTLNSSLTERLASINKTLEELTVRVKRLEKRAAAEREIVIVPVDQPIFDYYVDFLIKYVK 109
Query: 427 FLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAP 606
LQ ++ V L INSPGGAV A +Y T++ + + G A S A A A
Sbjct: 110 KLQFDNKTAGVILLINSPGGAVGATERLYSTIKGLNKTVYAVVAGLAASGA--YYTAVAA 167
Query: 607 GMRHALPNS 633
G +A P+S
Sbjct: 168 GRIYATPSS 176
>UniRef50_Q65ES6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Bacillus licheniformis ATCC 14580|Rep:
ATP-dependent Clp protease proteolytic subunit -
Bacillus licheniformis (strain DSM 13 / ATCC 14580)
Length = 243
Score = 40.3 bits (90), Expect = 0.040
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 430 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 609
L+S + LYINSPGG V G I+ +Q I + A S+AS++ AG
Sbjct: 48 LKSLGDVSSIDLYINSPGGDVFEGQAIHSMLQRHKAKINVYVDALAGSIASVIAMAGD-- 105
Query: 610 MRHALP-NSRIMIHQP 654
+ +P N+ +MIH P
Sbjct: 106 -KITMPSNAMMMIHNP 120
>UniRef50_Q3LW56 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bigelowiella natans|Rep: ATP-dependent Clp
protease proteolytic subunit - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 183
Score = 40.3 bits (90), Expect = 0.040
Identities = 25/106 (23%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Frame = +1
Query: 349 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGA-------VTAGLG 507
LL + I+ L I+ + + ++ +L+L++++S + ++LYIN G + +
Sbjct: 9 LLEKNILYLSTEIDFNSTKSFISTILYLKNKNSNETINLYINGKGSSYYNLFSRYDQIIS 68
Query: 508 IYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMI 645
++D + + ++T +G A + L+ + G+ R+ALP+S + I
Sbjct: 69 MHDIINSMKSKLSTLVLGIAFNEMCLISSYGSKDYRYALPSSLLYI 114
>UniRef50_A5KJS2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=2; Ruminococcus|Rep: ATP-dependent Clp
protease proteolytic subunit - Ruminococcus torques ATCC
27756
Length = 268
Score = 39.9 bits (89), Expect = 0.053
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 358 ERIICLMGPINDDI--SSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI 531
ER + L G I+D+ + QL + + + ++INSPGG V A IY+ ++
Sbjct: 20 ERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRDY 79
Query: 532 TPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
+ G A S AS++ AG P + +MIH P+
Sbjct: 80 KGSVTVKIDGIAASAASVIAMAGDTVC--VSPVAMMMIHNPA 119
>UniRef50_A4J7R2 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Desulfotomaculum reducens MI-1|Rep:
ATP-dependent Clp protease proteolytic subunit -
Desulfotomaculum reducens MI-1
Length = 258
Score = 39.1 bits (87), Expect = 0.093
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 451 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALP- 627
K + ++INS GG+V G IY ++ + G ACS+AS++ AG R +P
Sbjct: 57 KEIKIFINSYGGSVFEGTAIYSQLRRHPAQKTVYIDGFACSVASVIAMAGD---RVIMPK 113
Query: 628 NSRIMIH 648
N+ +MIH
Sbjct: 114 NTMMMIH 120
>UniRef50_A3JIS6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Marinobacter sp. ELB17|Rep: ATP-dependent
Clp protease proteolytic subunit - Marinobacter sp.
ELB17
Length = 621
Score = 39.1 bits (87), Expect = 0.093
Identities = 31/102 (30%), Positives = 52/102 (50%)
Frame = +1
Query: 349 LLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQY 528
LL + I + GPI + S A + L++ + + V++ INS GG V+ + IY+ +
Sbjct: 8 LLAQNEIYIYGPIGEGNVSA-KAFVDALKTLDTAQTVNVRINSEGGDVSHAIAIYNALNE 66
Query: 529 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
+ P + G A S AS + AG + N+ +MIH+P
Sbjct: 67 L-PDVMIHIDGLAASSASFVAMAGNKTLMAG--NAILMIHRP 105
>UniRef50_Q7NYX7 Cluster: Putative uncharacterized protein; n=2;
Betaproteobacteria|Rep: Putative uncharacterized protein
- Chromobacterium violaceum
Length = 208
Score = 38.7 bits (86), Expect = 0.12
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +1
Query: 385 INDDISSLI-VAQLLF-LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCV 558
++++I + I LL+ L++ SS V+L++N+PGG AGL I + + + T
Sbjct: 34 LSEEIGAAIHYTDLLYTLRTASSTDIVYLHLNTPGGNFDAGLQIINNITASQAHVVTILE 93
Query: 559 GQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
+A SM +L+ AG + H ++M H S
Sbjct: 94 ARAYSMGALIFLAGDELVVH--DTCQLMFHNYS 124
>UniRef50_Q97HW4 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; Firmicutes|Rep: ATP-dependent Clp protease
proteolytic subunit - Clostridium acetobutylicum
Length = 256
Score = 38.3 bits (85), Expect = 0.16
Identities = 23/89 (25%), Positives = 45/89 (50%)
Frame = +1
Query: 391 DDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 570
DD + + L + + ++L++NSPGG+V G+ I + ++ + + + A
Sbjct: 41 DDTDTTAASFKKDLDALGNLNTINLHLNSPGGSVFEGVTICNMLKQNSATVNVYVDALAA 100
Query: 571 SMASLLLAAGAPGMRHALPNSRIMIHQPS 657
S+AS++ AG N+ +M+H PS
Sbjct: 101 SIASVIAMAG--DTIFMPKNAMLMVHNPS 127
>UniRef50_A7GI71 Cluster: Putative Clp protease; n=1; Clostridium
botulinum F str. Langeland|Rep: Putative Clp protease -
Clostridium botulinum (strain Langeland / NCTC 10281 /
Type F)
Length = 266
Score = 38.3 bits (85), Expect = 0.16
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +1
Query: 427 FLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAP 606
FL+ + K + +YINS GG+V AGL IY ++ G A S+ S++ G
Sbjct: 62 FLKEIDNNKELDIYINSGGGSVFAGLAIYHQLKRHNGFKTVHVDGLAASITSVIALVGDK 121
Query: 607 GMRHALPNSRIMIHQP 654
+ A ++ MIH+P
Sbjct: 122 VVIPA--PAQFMIHKP 135
>UniRef50_Q6R878 Cluster: 77ORF015; n=10; root|Rep: 77ORF015 -
Staphylococcus phage 77
Length = 245
Score = 37.9 bits (84), Expect = 0.21
Identities = 27/75 (36%), Positives = 36/75 (48%)
Frame = +1
Query: 433 QSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGM 612
Q E S + V + INS GG + AG IY ++ + A S ASL+ AG
Sbjct: 34 QLEFSDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG--DH 91
Query: 613 RHALPNSRIMIHQPS 657
P +R+MIH PS
Sbjct: 92 IEMSPVARMMIHNPS 106
>UniRef50_Q7WLQ1 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=13; root|Rep: ATP-dependent Clp protease
proteolytic subunit - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 291
Score = 37.1 bits (82), Expect = 0.37
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 454 PVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAG 600
PV + +NSPGG + GL IY+ ++ + +G A S AS++ AG
Sbjct: 78 PVTVNVNSPGGDMFEGLAIYNLLREHQGEVTVKVLGLAASAASIIAMAG 126
>UniRef50_A1VPI3 Cluster: Peptidase S14, ClpP precursor; n=1;
Polaromonas naphthalenivorans CJ2|Rep: Peptidase S14,
ClpP precursor - Polaromonas naphthalenivorans (strain
CJ2)
Length = 674
Score = 37.1 bits (82), Expect = 0.37
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 469 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 648
INS GG+V GL IY+ ++ + G A S+ASL+ AG + N+ +MIH
Sbjct: 66 INSIGGSVPDGLAIYNALRRHKAEVTIEIDGMALSVASLIAMAG--DKVNMANNAMLMIH 123
Query: 649 QP 654
P
Sbjct: 124 GP 125
>UniRef50_A5EQQ6 Cluster: Putative Peptidase S14, ClpP; n=1;
Bradyrhizobium sp. BTAi1|Rep: Putative Peptidase S14,
ClpP - Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 684
Score = 36.7 bits (81), Expect = 0.49
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 469 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAP-GMRHALPNSRIMI 645
INS GG T G+ IY ++ I G A S ASL+ AG MR + +MI
Sbjct: 50 INSGGGIATEGMAIYSLLKAHPGKITVAIDGIAASAASLIAMAGDEIEMR---TGAMMMI 106
Query: 646 HQPSG 660
H PSG
Sbjct: 107 HDPSG 111
>UniRef50_Q85X42 Cluster: ORF60d; n=1; Pinus koraiensis|Rep: ORF60d
- Pinus koraiensis (Korean pine)
Length = 60
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -2
Query: 584 KDAMLHA*PTHHVAIGGVMYCIVS*IPRPAVTAPPGELM 468
KD + A P H V G + CI+S P P +T PPG+L+
Sbjct: 2 KDPIEAATPMHIVCTFGTITCIISKRPTPGITDPPGQLI 40
>UniRef50_Q0S7S6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Rhodococcus sp. RHA1|Rep: ATP-dependent
Clp protease proteolytic subunit - Rhodococcus sp.
(strain RHA1)
Length = 219
Score = 36.3 bits (80), Expect = 0.65
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +1
Query: 346 RLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQ 525
RL +RI+ L G ++ + ++ A L L + S V L+++ V A + DT+
Sbjct: 47 RLFDKRIVSLTGRLDSEATNRAAASLALLDA-SGDGEVQLWLHGVDADVDAAATLLDTLD 105
Query: 526 YITPPIATWCVGQACSMASLLLA 594
+ P+ C G MA LA
Sbjct: 106 LMGVPLHVHCRGDVRGMAVAFLA 128
>UniRef50_Q2AR30 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Bacillus weihenstephanensis KBAB4|Rep:
ATP-dependent Clp protease proteolytic subunit -
Bacillus weihenstephanensis KBAB4
Length = 247
Score = 36.3 bits (80), Expect = 0.65
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 430 LQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPG 609
+Q ++K +H++INS GG+ G+ I + ++ I G A S AS++ AG
Sbjct: 50 IQDVKAEK-IHVHINSGGGSAFDGVAICNLLKQHDAEIIVHIDGWAASAASVIAMAGD-- 106
Query: 610 MRHALP-NSRIMIHQPS 657
+ +P N+ +MIHQ S
Sbjct: 107 -KIVMPSNTMMMIHQAS 122
>UniRef50_Q11IP3 Cluster: Peptidase S14, ClpP precursor; n=1;
Mesorhizobium sp. BNC1|Rep: Peptidase S14, ClpP
precursor - Mesorhizobium sp. (strain BNC1)
Length = 234
Score = 35.9 bits (79), Expect = 0.86
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +1
Query: 367 ICLMGPINDDISSLIVAQLLFLQSE-SSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPI 543
+ +G + + + +V+ L L SE + + ++LYINSPGG + + Y ++ P+
Sbjct: 43 VFFVGEVTERKVAELVSVLDRLNSEHKALQSIYLYINSPGGDMDSAQAAYWAIKSSPIPV 102
Query: 544 ATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPS 657
+ S+A+++ A R A PN+ ++ S
Sbjct: 103 IAVNISTVASVAAVMFCGAAE--RAAFPNTYFILKPAS 138
>UniRef50_A5V8D3 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Sphingomonas wittichii RW1|Rep:
ATP-dependent Clp protease proteolytic subunit -
Sphingomonas wittichii RW1
Length = 688
Score = 35.9 bits (79), Expect = 0.86
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 367 ICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTM---QYITP 537
I + G + D L ++ L S + + + INSPGG V GL IY+ + +
Sbjct: 4 ILIYGIVGDSWDGLDANTIVPLIS-AGDDDLDVRINSPGGYVMEGLAIYNAIIRERGKGR 62
Query: 538 PIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
+ T G A SM S+L AG + N+ +MIH P
Sbjct: 63 KVTTHIDGLAASMGSILAMAGEEIV--MADNALLMIHNP 99
>UniRef50_A0VK63 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Delftia acidovorans SPH-1|Rep:
ATP-dependent Clp protease proteolytic subunit - Delftia
acidovorans SPH-1
Length = 345
Score = 35.9 bits (79), Expect = 0.86
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITP---PIATWCVGQACSMASLLLAAGAPGMRHALP 627
+ + +N+PGG V AGLGI++ ++ + T +G A S+ S+LL AG R
Sbjct: 45 IDVELNTPGGDVFAGLGIFNMLRAHAAKGFQVTTRVMGVAASIGSVLLLAG--DKREMPK 102
Query: 628 NSRIMIH 648
N+ M H
Sbjct: 103 NTMAMTH 109
>UniRef50_Q1A0W9 Cluster: Gp102; n=2; unclassified Siphoviridae|Rep:
Gp102 - Mycobacterium phage 244
Length = 286
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 385 INDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTM-QYITPP 540
+ND + QL E +H+ +NSPGG+V AG+ ++D + Y T P
Sbjct: 118 VNDYSVEACLNQLALWHREDPNCDMHIVMNSPGGSVIAGMHLFDQIAAYSTRP 170
>UniRef50_A7E5X1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 935
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 199 RVGRRLCVGITNVYNVTRQINTSLPKLLGMIPIVVEQTGRGERAYDIYSRL 351
R ++ +T Y+ T +NT + L+ + +++E + + E AYD SRL
Sbjct: 725 RAVQKTITSVTEAYSKTHSLNTIVSDLMSLTNLIIETSKKNEIAYDDLSRL 775
>UniRef50_Q9NDT9 Cluster: BCS-5; n=1; Balanus amphitrite|Rep: BCS-5
- Balanus amphitrite (Barnacle)
Length = 860
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 506 PRPAVTAPPGELMYKWTGFL--LDSDCRNSNCATIKELISSL 387
PRP V AP GE++ TG + L SDC++ CA K + ++
Sbjct: 326 PRPPVAAPSGEVLATSTGVISGLGSDCQDKECAMGKLIADAI 367
>UniRef50_Q982R9 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=3; Rhizobiales|Rep: ATP-dependent Clp
protease proteolytic subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 281
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 469 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAG 600
INSPGG + G+ IY+ ++ ++ +G A S AS++ AG
Sbjct: 82 INSPGGDMFEGIAIYNLLREHKAKVSVQVMGWAASAASIIAMAG 125
>UniRef50_Q1IJ44 Cluster: Signal peptide peptidase SppA, 36K type
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Signal peptide peptidase SppA, 36K type precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 303
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +1
Query: 355 RERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
R ++ L G I D S +VAQL +SS K + L+INSPGG A IY
Sbjct: 49 RIAVVDLEGVIVDPKS--VVAQLKKYGDDSSIKAIILHINSPGGGAAASEEIY 99
>UniRef50_A5ZRV6 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=1; Ruminococcus obeum ATCC 29174|Rep:
ATP-dependent Clp protease proteolytic subunit -
Ruminococcus obeum ATCC 29174
Length = 252
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +1
Query: 463 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 642
+YINS GG V AG+ I+ + T G A S+AS++L A + + ++IM
Sbjct: 74 VYINSGGGDVFAGIAIHSILSRHTGHKTGIVDGMAASIASVILMACDSIVMSS--GAQIM 131
Query: 643 IHQP 654
IH+P
Sbjct: 132 IHKP 135
>UniRef50_Q4ZCT9 Cluster: ORF015; n=14; root|Rep: ORF015 -
Staphylococcus phage 3A
Length = 257
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
+ ++INS GG+V G IY+ ++ I + A S+AS++ +G H NS
Sbjct: 54 IDVHINSSGGSVFEGHAIYNMLKMHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSF 111
Query: 637 IMIH 648
+MIH
Sbjct: 112 LMIH 115
>UniRef50_Q2NPI5 Cluster: ClpP family protein; n=3; root|Rep: ClpP
family protein - Xanthomonas phage OP1
Length = 245
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +1
Query: 457 VHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSR 636
V + I+SPGG + AGL IY+ + + VG+A S AS++ +G H ++
Sbjct: 75 VTVNIDSPGGDMFAGLAIYNQLIAHQGKVTVNVVGRAASAASVIAMSGDQINMHT--SAF 132
Query: 637 IMIH 648
+MIH
Sbjct: 133 LMIH 136
>UniRef50_O26897 Cluster: Protease IV; n=1; Methanothermobacter
thermautotrophicus str. Delta H|Rep: Protease IV -
Methanobacterium thermoautotrophicum
Length = 287
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/69 (33%), Positives = 30/69 (43%)
Frame = +1
Query: 391 DDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 570
DDI LI S+ S K + L INSPGG A + D + P+ +W
Sbjct: 58 DDIKELIAEA----NSDPSVKAIVLDINSPGGTPVASEELMDAINKSEKPVVSWISDSGT 113
Query: 571 SMASLLLAA 597
S A L +A
Sbjct: 114 SGAYLAASA 122
>UniRef50_Q0BQI3 Cluster: Signal peptide peptidase sppA; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Signal peptide
peptidase sppA - Granulobacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1)
Length = 347
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 439 ESSKKPVHLYINSPGGAVTAGLGIYDTMQYIT--PPIATWCVGQACSMASLLLAAGA 603
+SS K V L INSPGG V G ++D + + P+ T A S ++ A A
Sbjct: 115 DSSVKAVLLEINSPGGTVAGGEALHDALAQLAARKPLVTTMESVAASAGYMIAAPSA 171
>UniRef50_A1ZY45 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; Microscilla marina ATCC 23134|Rep:
ATP-dependent Clp protease proteolytic subunit -
Microscilla marina ATCC 23134
Length = 429
Score = 34.3 bits (75), Expect = 2.6
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Frame = +1
Query: 397 ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYI---TP--PIATWCVG 561
IS A+ LF ++ ++ +++ INSPGG +T GL I + I TP I T+ G
Sbjct: 34 ISGRRFAEELFRLTKRFRR-INVRINSPGGKITDGLSICAAILNINQSTPNVRIDTYVDG 92
Query: 562 QACSMASLLLAAGAP-GMRHALPNSRIMIHQP 654
A S+A L+ G GM + +++M+H P
Sbjct: 93 LALSIAGLIAVCGKKVGMCNF---AKLMLHNP 121
>UniRef50_Q3LWK4 Cluster: Clp protease; n=1; Bigelowiella
natans|Rep: Clp protease - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 237
Score = 33.5 bits (73), Expect = 4.6
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Frame = +1
Query: 328 AYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVT---- 495
A D+ S L II + P+ + L+ QLL+ ++ SKK ++ INS G +
Sbjct: 53 APDVPSFLFENSIIFIGMPLTEITIELLFCQLLWQNNKKSKKYINFIINSYGSHSSYTDI 112
Query: 496 -----AGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQP 654
+ L + D +++ + + +G++ A L + R AL NS P
Sbjct: 113 NNIFGSYLTLIDLIEFNSYQTNSIVIGKSFGTALFLFLTSSTNKRIALENSSFSFETP 170
>UniRef50_A7DYB1 Cluster: Putative uncharacterized protein; n=1;
Streptococcus phage M102|Rep: Putative uncharacterized
protein - Streptococcus phage M102
Length = 298
Score = 33.5 bits (73), Expect = 4.6
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +1
Query: 397 ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSM 576
I+ +A+ + +S+ + L +NS GG+ AG IY ++ + +T +
Sbjct: 24 ITDYTIAEDIISDIRNSEDDITLILNSGGGSYFAGAEIYSELK-ASNQKSTAYIASLAGS 82
Query: 577 ASLLLAAGAPGMRHALPNSRIMIHQ 651
AS +LA GA R ++++M HQ
Sbjct: 83 ASAILAMGAT-KRVISESAQLMFHQ 106
>UniRef50_Q75QN7 Cluster: ATP-dependent Clp protease proteolytic
subunit; n=5; root|Rep: ATP-dependent Clp protease
proteolytic subunit - Comamonas acidovorans (Pseudomonas
acidovorans) (Delftia acidovorans)
Length = 281
Score = 33.1 bits (72), Expect = 6.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 451 KPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAG 600
+ V + +NSPGG G+ IY+ ++ + +G A S+AS++ AG
Sbjct: 75 RDVTVNLNSPGGDFFEGMAIYNLLREHKAKVTIRVLGVAASVASVIAMAG 124
>UniRef50_Q3A3D5 Cluster: Signal peptide peptidase SppA, 67K type;
n=2; Desulfuromonadales|Rep: Signal peptide peptidase
SppA, 67K type - Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1)
Length = 298
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 397 ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYD 516
+S V QL+ + + S K V L +NSPGGAV I+D
Sbjct: 54 VSEPTVKQLVSFKEDHSIKAVILRVNSPGGAVAPSQEIHD 93
>UniRef50_A5NH97 Cluster: Peptidase S14, ClpP precursor; n=19;
root|Rep: Peptidase S14, ClpP precursor - Shewanella
baltica OS223
Length = 690
Score = 32.7 bits (71), Expect = 8.0
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 469 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 648
I+SPGG V G+ IY+ ++ + G A SMAS++ A + N+ +M+H
Sbjct: 82 IHSPGGDVFEGMAIYNMIKGHPAHKVCYIDGLAASMASVIAMAFDEVIMP--ENAMMMVH 139
Query: 649 QPSG 660
+P G
Sbjct: 140 KPWG 143
>UniRef50_A5ICQ4 Cluster: Signal peptide peptidase; n=4; Legionella
pneumophila|Rep: Signal peptide peptidase - Legionella
pneumophila (strain Corby)
Length = 318
Score = 32.7 bits (71), Expect = 8.0
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 451 KPVHLYINSPGGAVTAGLGIYDTMQY---ITPPIATWCV-GQACSMASLLLAAGAPGMRH 618
K + + INSPGG+ IY+ +QY + P I T+ V C+ A+ +A GA + +
Sbjct: 103 KALIVRINSPGGSPVQAEYIYNVLQYYKSLKPNIKTYAVCVDMCASAAYYVAVGADEI-Y 161
Query: 619 ALPNSRI 639
A P S +
Sbjct: 162 ASPASMV 168
>UniRef50_A4J0B7 Cluster: Signal peptidase, S49 family; n=11;
Francisella tularensis|Rep: Signal peptidase, S49 family
- Francisella tularensis subsp. tularensis (strain
WY96-3418)
Length = 307
Score = 32.7 bits (71), Expect = 8.0
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 436 SESSKKPVHLYINSPGGAVTAGLGIYDTMQYIT---PPIATWCV-GQACSMASLLLAAGA 603
+ S K V + INSPGG+ IY MQY+ P I + V C+ +AAGA
Sbjct: 87 ANKSVKGVIVEINSPGGSPVQSDEIYSHMQYLQHKYPTIPMYAVCTDVCASGGYYIAAGA 146
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,405,332
Number of Sequences: 1657284
Number of extensions: 13448070
Number of successful extensions: 29962
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 29219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29937
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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