Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2k24
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0563 + 26258320-26259099 206 2e-53
02_05_0054 + 25449890-25450782,25450897-25450960 196 1e-50
03_02_0756 - 10936936-10937133,10937352-10937440,10937533-109375... 132 2e-31
01_05_0060 + 17742566-17742826,17744132-17744246,17746818-177469... 123 1e-28
06_01_0264 + 1948497-1948579,1948702-1948748,1948857-1948929,194... 87 2e-17
01_01_1177 - 9378230-9378301,9378385-9378498,9379641-9379786,938... 74 1e-13
03_02_0973 - 12826036-12826131,12826379-12826462,12826542-128265... 70 1e-12
03_04_0047 + 16800213-16800280,16800401-16800435,16800652-168007... 57 1e-08
10_08_1067 + 22671113-22671589 57 1e-08
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 49 4e-06
12_01_1052 + 10821964-10822064,10822434-10822607,10823086-108233... 30 1.9
11_01_0382 - 2892887-2893161,2893593-2893717,2893801-2894013,289... 30 1.9
02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,571... 30 1.9
09_02_0530 + 10285844-10287217 29 4.3
05_06_0223 - 26525618-26526112,26526203-26526370,26526649-265274... 29 4.3
06_01_0040 - 393818-393938,394331-394389,394595-394756,394875-39... 28 5.7
02_05_0440 - 29035974-29036356,29037977-29038133,29038260-290388... 28 5.7
>04_04_0563 + 26258320-26259099
Length = 259
Score = 206 bits (502), Expect = 2e-53
Identities = 93/126 (73%), Positives = 109/126 (86%)
Frame = +1
Query: 283 GMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVH 462
G++P+V+E T RGERAYDI+SRLL+ERI+C+ GPI DD +SL+VAQLLFL+SE+ KPVH
Sbjct: 35 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 94
Query: 463 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 642
LYINSPGG VTAGL IYDTMQYI P+ T C+GQA SMASLLLAAGA G R ALPN+R+M
Sbjct: 95 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVM 154
Query: 643 IHQPSG 660
IHQPSG
Sbjct: 155 IHQPSG 160
>02_05_0054 + 25449890-25450782,25450897-25450960
Length = 318
Score = 196 bits (478), Expect = 1e-50
Identities = 90/126 (71%), Positives = 107/126 (84%)
Frame = +1
Query: 283 GMIPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVH 462
G++P+V+E T RGERAYDI+SRLL+ERI+ + GPI D+ +SL+VAQLLFL+SE+ KPVH
Sbjct: 72 GLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVH 131
Query: 463 LYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIM 642
LYINSPGG VTAGL IYDTMQYI P+ T C+GQA SM SLLLAAGA G R ALPN+R+M
Sbjct: 132 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVM 191
Query: 643 IHQPSG 660
IHQPSG
Sbjct: 192 IHQPSG 197
>03_02_0756 -
10936936-10937133,10937352-10937440,10937533-10937567,
10938223-10938295,10938378-10938423,10938873-10938965,
10939047-10939170,10939463-10939563
Length = 252
Score = 132 bits (319), Expect = 2e-31
Identities = 59/113 (52%), Positives = 84/113 (74%)
Frame = +1
Query: 322 ERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAG 501
ER + S+L + RII GP+ DD++++IVAQLL+L + K + +Y+NSPGG+VTAG
Sbjct: 63 ERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYVNSPGGSVTAG 122
Query: 502 LGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
+ I+DTM++I P ++T C+G A SM + LL+AG G R++LPNSRIMIHQP G
Sbjct: 123 MAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLG 175
>01_05_0060 +
17742566-17742826,17744132-17744246,17746818-17746993,
17747323-17747418,17747504-17747782
Length = 308
Score = 123 bits (297), Expect = 1e-28
Identities = 56/109 (51%), Positives = 77/109 (70%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIY 513
D + LLR+RI+ L P++D + LI++QLL L +E K + L+INSPGG++TAG+G+Y
Sbjct: 71 DTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMGVY 130
Query: 514 DTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
D M++ I+T C G A SM + LLAAG G R +PN+RIMIHQPSG
Sbjct: 131 DAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSG 179
>06_01_0264 +
1948497-1948579,1948702-1948748,1948857-1948929,
1949399-1949519,1949630-1949767,1951074-1951190,
1951454-1951549,1951825-1951974
Length = 274
Score = 86.6 bits (205), Expect = 2e-17
Identities = 49/134 (36%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Frame = +1
Query: 202 VGRRLCVGITNVYNVTRQINTSLPKLLGMIPIVVEQTGRGERAY-DIYSRLLRERIICLM 378
V RR+ +G++N TR + +P +G + G G + DI++ L RERII +
Sbjct: 61 VNRRISLGLSNK-RATRARISMMP--VGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIG 117
Query: 379 GPINDDISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCV 558
I+++ S+ ++A +L+L S + K + LYIN PGG +T + +YDTM + PI T C+
Sbjct: 118 DSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPGGDLTPCMALYDTMLSLKSPIGTHCL 177
Query: 559 GQACSMASLLLAAG 600
G A ++A +LAAG
Sbjct: 178 GFAFNLAGFILAAG 191
>01_01_1177 -
9378230-9378301,9378385-9378498,9379641-9379786,
9380004-9380086,9381178-9381233,9381619-9381822,
9381914-9382159
Length = 306
Score = 73.7 bits (173), Expect = 1e-13
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG--------GA 489
D+ S L + RI+ L + ++ L++A+ L+LQ + ++KP++LYINS G G
Sbjct: 98 DLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTKNGEKLGY 157
Query: 490 VTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGA 603
T IYD M+Y+ PI T CVG A A+LLLAAGA
Sbjct: 158 ETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGA 195
>03_02_0973 -
12826036-12826131,12826379-12826462,12826542-12826595,
12826742-12826830,12826889-12826985,12827066-12827074,
12827419-12827478,12828082-12828204,12828654-12828758,
12830203-12830535
Length = 349
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 17/124 (13%)
Frame = +1
Query: 334 DIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLYINSPG---------G 486
D+ S LL RI+ + P+ ++ L+VAQL++L+ +SK+PV++YINS G G
Sbjct: 130 DLPSLLLHGRIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVG 189
Query: 487 AVTAGLGIYDTMQYITPP---IATWCVGQACSMASLLLAAGAPGMRHALPNSR-----IM 642
+ G IYD M + I T C+G A A L+LAAG G R+ P+++ M
Sbjct: 190 MESEGFAIYDAMMRMKTEKIRIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKDSIMPAM 249
Query: 643 IHQP 654
I QP
Sbjct: 250 IQQP 253
>03_04_0047 +
16800213-16800280,16800401-16800435,16800652-16800754,
16801333-16801537,16801565-16801647,16801986-16802016,
16802092-16802148,16802374-16802514,16802726-16802779,
16802915-16802962,16803106-16803153
Length = 290
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 529 ITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
I P + T C G S A+++LA G GMR+A+PN+R+MIHQP G
Sbjct: 195 IKPKVGTVCFGVVASQAAIILAGGEKGMRYAMPNARVMIHQPQG 238
>10_08_1067 + 22671113-22671589
Length = 158
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1
Query: 502 LGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIHQPSG 660
+ IYD MQ + ++T +G A S AS++L G G R A+PN+RIMIHQP G
Sbjct: 1 MAIYDVMQLVRADVSTIGLGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVG 53
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 48.8 bits (111), Expect = 4e-06
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +1
Query: 280 LGMIPIVVEQTGRGER-----AYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSES 444
+GM + + + GRG R A D+ S LL RII L PI ++ LI AQ L+L +
Sbjct: 139 MGMGTMSMGRAGRGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDD 198
Query: 445 SKKPVHLYINSPG 483
KP++LYINS G
Sbjct: 199 RTKPIYLYINSTG 211
>12_01_1052 +
10821964-10822064,10822434-10822607,10823086-10823346,
10829833-10831798,10832114-10832515
Length = 967
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 546 RYWGSDVLHCIVDTETSGYSSTRR 475
R +G D++ CI DT +S YSS R
Sbjct: 777 RKYGHDIVDCIADTRSSVYSSMHR 800
>11_01_0382 -
2892887-2893161,2893593-2893717,2893801-2894013,
2894101-2895363,2895669-2895712
Length = 639
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 238 YNVTRQINTSLPKLLGMIPIVVEQTGRGE-----RAYDIYS-RLLRERIICLMGPIN-DD 396
Y++ + + S KLL +V+ R E A DI + L + + ++ I+ D+
Sbjct: 522 YDIVLETDVSFAKLLVFPSVVLPAEYRDEDVPEQNALDIVPCKALDQEMALVVSDIHHDN 581
Query: 397 ISSLIVAQLLFLQSESSKKPVHLYINSP 480
SL +Q++ ++ S K P H INSP
Sbjct: 582 QPSLTTSQVVESEASSDKGPSHPVINSP 609
>02_01_0767 - 5709733-5709789,5709845-5709871,5710374-5710449,
5710542-5710661,5711321-5711421,5711618-5711743,
5713504-5713596,5713694-5713816,5713889-5714032,
5714539-5714672,5714893-5715002,5715315-5715430,
5716438-5716572,5716650-5716820,5717545-5717709,
5718165-5718242,5718313-5718445,5718551-5718741,
5718842-5718914,5719001-5719056,5719142-5719300,
5719383-5719496,5719562-5719654,5720544-5720726,
5720801-5720878,5720966-5721052,5721135-5721216,
5721288-5721400,5721486-5721636,5721759-5721877,
5721966-5722163,5722377-5722442,5723837-5723957,
5724224-5724343,5724412-5724542,5725210-5725341,
5725418-5725519,5726231-5726437,5726510-5726626,
5727468-5727623,5727721-5727810,5728624-5728848,
5728969-5729091,5729202-5729284,5729459-5729618,
5730264-5730374,5730652-5730751,5731375-5731454,
5731752-5731847,5731961-5732110
Length = 1991
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -1
Query: 324 LTSTSLFDYNRYHTQ*LWQTGINLPCYIVDISYSNAQSSAYSTYGTQRHCKYQSFIVLLL 145
L S D+++Y + GI C + D++ ++ +++S+ +QR C + + LLL
Sbjct: 1446 LDSLISIDHDKYFLNQIQSRGILRSC-LSDVNNYLSKEASFSSESSQRFCTIDAQLSLLL 1504
Query: 144 KYSVRY 127
+ S Y
Sbjct: 1505 RISHHY 1510
>09_02_0530 + 10285844-10287217
Length = 457
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 477 SWWSCNRWSRYLRYNAVHHSPNSDVVRRSGMQHGIFVAGRWS 602
+WW CN + ++ N++ H P+ + + +F G WS
Sbjct: 199 AWWKCNHNTHHIACNSLDHDPDLQHMPLFAVSSKLF--GLWS 238
>05_06_0223 -
26525618-26526112,26526203-26526370,26526649-26527473,
26527898-26528004,26529701-26529767
Length = 553
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 573 AACLTDAPRRYWGSDVLHCIVDTETSGYSSTRRINVQMDRLFTRL 439
AAC++ A R W + I+ TET G + V M R FTR+
Sbjct: 76 AACVSQAFLRSWRR-YPNLILTTETLGLEQKKHWKVHMARYFTRV 119
>06_01_0040 -
393818-393938,394331-394389,394595-394756,394875-395085,
395174-395290,395794-395859,396020-396292,397410-397492,
398322-398327,398738-398797,399093-399137,399530-399639,
400412-400510,400599-400796,401463-401517,401571-401628,
402191-402360
Length = 630
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 397 ISSLIVAQLLFLQSESSKKPVHLYINSPGGAVTAGLGIYDTMQYITPPIATWCVGQAC 570
+ S V QL+ +E + V ++N PGG + LG+ Q + P A+ + Q C
Sbjct: 69 VGSKTVIQLVAFVTEYFR--VLQFLNLPGGDLIINLGVLAAPQVVLPQQASHLMEQGC 124
>02_05_0440 -
29035974-29036356,29037977-29038133,29038260-29038824,
29038866-29039191
Length = 476
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 659 PDG*CIMIRELGSACRIPGAPAASNKDA 576
P G C I S+CR P APAAS +
Sbjct: 73 PSGGCRSISTATSSCRTPRAPAASGSSS 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,742,114
Number of Sequences: 37544
Number of extensions: 375438
Number of successful extensions: 846
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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