Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2k24
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49073-1|CAA88886.1|  206|Caenorhabditis elegans Hypothetical pr...   196   9e-51
L23651-8|AAK84495.1|  500|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U38378-1|AAA79751.1|  418|Caenorhabditis elegans Hypothetical pr...    28   5.1  

>Z49073-1|CAA88886.1|  206|Caenorhabditis elegans Hypothetical
           protein ZK970.2 protein.
          Length = 206

 Score =  196 bits (479), Expect = 9e-51
 Identities = 87/124 (70%), Positives = 106/124 (85%)
 Frame = +1

Query: 289 IPIVVEQTGRGERAYDIYSRLLRERIICLMGPINDDISSLIVAQLLFLQSESSKKPVHLY 468
           IP V++  G+GER YDIYSRLLR+RI+CLM P++D I+S ++AQLLFLQSES KKP+H+Y
Sbjct: 11  IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMY 70

Query: 469 INSPGGAVTAGLGIYDTMQYITPPIATWCVGQACSMASLLLAAGAPGMRHALPNSRIMIH 648
           INSPGG+VTAGL IYDT+Q I+ P++TW +GQA SM SLLL AG  GMR ALPNSRIM+H
Sbjct: 71  INSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVH 130

Query: 649 QPSG 660
           QPSG
Sbjct: 131 QPSG 134


>L23651-8|AAK84495.1|  500|Caenorhabditis elegans Hypothetical
           protein C29E4.10 protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 217 CVGITNVYNVTRQINTSLPKLLGMIPI--VVEQTGRGERAYDIYSRLLRERII 369
           CVG+ N  N +      L K+L +      +   G G R  D YSRLL +R I
Sbjct: 166 CVGVWNERNFSESYVKELRKILNLNGFNETLIVAGEGFRMDDSYSRLLDKRFI 218


>Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical
           protein K09E4.4 protein.
          Length = 715

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 456 CPFVH*FSWWSCNRWSRYLRYNAVH 530
           C F + F+WW   +W R++ + A++
Sbjct: 142 CTFSYSFAWWEWPQWERFIDWIALN 166


>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
           protein ZK455.2 protein.
          Length = 1118

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 474 FSWWSCNRWSRYLRYNAVHHSPNSDVVRRSGMQHGIFVAGRWSPR 608
           F+  SCN++S       +H+  N+ V    G  + + V GR +PR
Sbjct: 107 FTMESCNKYSGVEHAAFLHYLKNASVYFGPGCNNEMLVIGRLAPR 151


>U38378-1|AAA79751.1|  418|Caenorhabditis elegans Hypothetical
           protein R11F4.3 protein.
          Length = 418

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 553 CVGQACSMASLLLAAGAPGMRHALPNSRIMIHQ 651
           C G  C+  SLL  A + G+R +L   R+M  Q
Sbjct: 288 CRGNTCNRPSLLQQAQSSGVRDSLEEQRLMEEQ 320


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,160,827
Number of Sequences: 27780
Number of extensions: 320682
Number of successful extensions: 635
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)