BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2k12
(685 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton anti... 25 2.9
AF437889-1|AAL84184.1| 155|Anopheles gambiae odorant binding pr... 24 5.1
AY146725-1|AAO12085.1| 155|Anopheles gambiae odorant-binding pr... 23 6.8
AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding pr... 23 6.8
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 6.8
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 23 6.8
>EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton
antiporter protein.
Length = 647
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 190 ALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNE 318
++TG ++LK KQ+L +DG + ++ D+ I++ E
Sbjct: 575 SVTGTKLLKKTKQQLEPLDGTLGWRRSHRPSLHDISIIDEEEE 617
>AF437889-1|AAL84184.1| 155|Anopheles gambiae odorant binding
protein protein.
Length = 155
Score = 23.8 bits (49), Expect = 5.1
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +3
Query: 48 AFEALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCF 194
A ++L ++ ++ + R VC S ++A + G FP++ C+
Sbjct: 33 AQQSLTQADMDEIAKGMRKVCMSRPKISEEMANYPSQGIFPDDKEFKCY 81
>AY146725-1|AAO12085.1| 155|Anopheles gambiae odorant-binding
protein AgamOBP6 protein.
Length = 155
Score = 23.4 bits (48), Expect = 6.8
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +3
Query: 48 AFEALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCF 194
A ++L ++ ++ + R VC S ++A + G FP++ C+
Sbjct: 33 AQQSLTQADMDEIAKGMRKVCMSRHKISEEMANYPSQGIFPDDQEFKCY 81
>AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding
protein AgamOBP18 protein.
Length = 151
Score = 23.4 bits (48), Expect = 6.8
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = +3
Query: 48 AFEALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCF 194
A ++L ++ ++ + R VC S ++A + G FP++ C+
Sbjct: 29 AQQSLTQADMDEIAKGMRKVCMSRHKISEEMANYPSQGIFPDDKEFKCY 77
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 23.4 bits (48), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 471 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 382
AD AA +RY + + RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 23.4 bits (48), Expect = 6.8
Identities = 15/60 (25%), Positives = 22/60 (36%)
Frame = -3
Query: 227 CFTIFRTSFPVKAYFRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKRFKC 48
C + + PV +R R + RG +R+ PVD A +A KC
Sbjct: 373 CISSIMEAMPVSVDRQRCYRCLERGHLARDCQSPVDRQQACIRCGADGHYAKSCTSEIKC 432
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,776
Number of Sequences: 2352
Number of extensions: 18305
Number of successful extensions: 91
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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