Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2k10
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    26   0.19 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.57 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   0.57 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.7  

>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 365 GHAGSSQPSTSASRRTGPPSRNTSSP 288
           G + S QP+T +  R  P SRN   P
Sbjct: 245 GSSRSHQPATKSKPRPAPASRNAPEP 270


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 521 SFIKMYNKFNYKKKLKSNYCVAKLV--CLLLSFCVQFRLLVAGTIKYLIFFL 372
           SFIK   +  YK+ LK +Y +   V   LL    V    + A  I+ ++ F+
Sbjct: 129 SFIKAGFRLEYKQLLKRSYLIISFVLFSLLARVPVMLMTISADFIQQIMLFV 180


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 521 SFIKMYNKFNYKKKLKSNYCVAKLV--CLLLSFCVQFRLLVAGTIKYLIFFL 372
           SFIK   +  YK+ LK +Y +   V   LL    V    + A  I+ ++ F+
Sbjct: 129 SFIKAGFRLEYKQLLKRSYLIISFVLFSLLARVPVMLMTISADFIQQIMLFV 180


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 350  SQPSTSASRRTGPPSRNTSSPMISLRAQANR 258
            + P   A    G P RN++SP  S R+   R
Sbjct: 917  TSPRQPAETHAGSPCRNSASPASSDRSGTPR 947


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,885
Number of Sequences: 336
Number of extensions: 2514
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)