Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2k09
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical pr... 36 0.005
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 3.1
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 3.1
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 3.1
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 3.1
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z66519-5|CAA91382.2| 500|Caenorhabditis elegans Hypothetical pr... 27 4.1
U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid sphingomye... 27 4.1
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 27 4.1
U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z82278-2|CAB05254.1| 170|Caenorhabditis elegans Hypothetical pr... 26 7.2
U53139-4|AAK18931.2| 369|Caenorhabditis elegans Serpentine rece... 26 7.2
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 25 9.5
U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell m... 25 9.5
U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell m... 25 9.5
AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance prot... 25 9.5
>Z81070-5|CAB02999.2| 84|Caenorhabditis elegans Hypothetical
protein F26E4.6 protein.
Length = 84
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 143 LPFKFTNRYVATLVFSIFFGTGFWAPFIILWYSMAK 250
LPF TN++ F GFWAPFI++ Y + K
Sbjct: 46 LPFHVTNKWGFAAKAVTFLAIGFWAPFIVVEYQLRK 81
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 32 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 66
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 32 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 66
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 GKAQESLRLQNRHHHDEGPPQPFDN--LPFKFTNR 166
G+ Q R+ +H D PPQ F+N LPF+ R
Sbjct: 103 GQDQTPYRVNLQHSSDTRPPQGFNNSALPFETDQR 137
>Z66519-5|CAA91382.2| 500|Caenorhabditis elegans Hypothetical
protein B0334.5 protein.
Length = 500
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 128 QPFDNLPFKFTNRYVATLVFSIFFGTGFWA-PFIIL 232
QPF NLP + V +L+ ++ +GT F A PF+ +
Sbjct: 36 QPFINLPSDVVAQTVISLI-ALIYGTSFLANPFLFI 70
>U23453-4|AAC46756.2| 564|Caenorhabditis elegans Acid
sphingomyelinase protein 1 protein.
Length = 564
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 261 HNDFFAMEYHNMINGAQKPVPKKIENTNVATYRF 160
H D+F + Y +M N + KP+ + +V T+ +
Sbjct: 417 HLDYFTVFYEDMHNVSSKPISVGYASPSVTTFEY 450
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 62 YVGKAQESLRLQNRHHHDEGPPQPFDNLP 148
YVGK+ SL RH H Q D P
Sbjct: 28 YVGKSDRSLSAHKRHRHPRPEGQEDDKKP 56
>U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical
protein R09F10.3 protein.
Length = 468
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = +1
Query: 172 SNISIFNLL-RNRFL-GTIYHIVVLHGK 249
+NI +FN +NR+ GT++H + L+GK
Sbjct: 400 ANIHLFNCFAQNRWTAGTLFHFISLYGK 427
>Z82278-2|CAB05254.1| 170|Caenorhabditis elegans Hypothetical
protein M162.2 protein.
Length = 170
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 104 HHHDEGPPQPFDNLPFKFTNRYVATLVFSIFFGTGF 211
HHH+ P +P + T+ ++A SI FG GF
Sbjct: 51 HHHNPAGPSWLAYVPDQETSNFLAVYAGSI-FGEGF 85
>U53139-4|AAK18931.2| 369|Caenorhabditis elegans Serpentine
receptor, class w protein67 protein.
Length = 369
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 166 ICSNISIFNLLRNRFLGTIYHIVVLHGKEIVVNSI 270
IC+ + F + ++ +LG + +VV+ G + +N+I
Sbjct: 297 ICTVVQGFVVEKSGYLGITFDLVVIFGLFVTINAI 331
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily
assigned gene nameprotein 162 protein.
Length = 2643
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 312 QRHSLFIQKVKSNKY*IH 259
+RHSL +QK+ S Y +H
Sbjct: 648 RRHSLVVQKIGSTNYTVH 665
>U40427-5|AAP82652.1| 356|Caenorhabditis elegans Abnormal cell
migration protein13, isoform b protein.
Length = 356
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 104 HHHDEGPPQPFDNLPFKFTNR 166
HHH EGP P + F +NR
Sbjct: 309 HHHFEGPLVPSETSAFHSSNR 329
>U40427-4|AAA81470.2| 362|Caenorhabditis elegans Abnormal cell
migration protein13, isoform a protein.
Length = 362
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 104 HHHDEGPPQPFDNLPFKFTNR 166
HHH EGP P + F +NR
Sbjct: 315 HHHFEGPLVPSETSAFHSSNR 335
>AF150958-1|AAD43178.1| 362|Caenorhabditis elegans guidance protein
MIG-13 protein.
Length = 362
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 104 HHHDEGPPQPFDNLPFKFTNR 166
HHH EGP P + F +NR
Sbjct: 315 HHHFEGPLVPSETSAFHSSNR 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,200,156
Number of Sequences: 27780
Number of extensions: 139283
Number of successful extensions: 458
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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