Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2k08
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    36   0.001
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    36   0.001
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    27   0.78 
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    27   0.78 
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    26   1.4  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    26   1.4  
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    23   7.3  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   9.6  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 514 YKTELCRPFEEAGVCKYGDKCQFAH 588
           Y+ ++C+ ++E G C +GD C+F H
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLH 200



 Score = 32.3 bits (70), Expect = 0.016
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 628 YKTELCRTFHSVGFCPYGPRCHFVHN 705
           Y+ ++C+ +   G+C +G  C F+H+
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHD 201


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +1

Query: 514 YKTELCRPFEEAGVCKYGDKCQFAH 588
           Y+ ++C+ ++E G C +GD C+F H
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLH 200



 Score = 32.3 bits (70), Expect = 0.016
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 628 YKTELCRTFHSVGFCPYGPRCHFVHN 705
           Y+ ++C+ +   G+C +G  C F+H+
Sbjct: 176 YQPDICKDYKETGYCGFGDSCKFLHD 201


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 471 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 557
           HH   GS ATSH ++Q  A PT+   G +
Sbjct: 24  HH---GSIATSHSTIQHHAAPTIQHVGSV 49


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 471 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 557
           HH   GS ATSH ++Q  A PT+   G +
Sbjct: 24  HH---GSIATSHSTIQHHAAPTIQHVGSV 49


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 486 GSSATSHKSLQDRALPTV*RSGGL 557
           GS ATSH S+Q  A P +   G +
Sbjct: 26  GSIATSHSSIQHHAAPAIHHVGSI 49


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 471 HHQ*TGSSATSHKSLQDRALPTV*RSGGL 557
           HH   GS ATSH S+Q  A P +   G +
Sbjct: 24  HH---GSIATSHSSIQHHAAPAIHHVGSV 49


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 655 HSVGFCPYGPRCHFVHNA 708
           +S+ FCPY  R H + +A
Sbjct: 25  YSMRFCPYAQRVHLMLDA 42


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 583 AHGVRELRNLQRHPKYKTELCRT 651
           +HG R L + QR   YK EL  T
Sbjct: 233 SHGDRLLEDRQRFDNYKRELKET 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,953
Number of Sequences: 2352
Number of extensions: 14750
Number of successful extensions: 115
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)