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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2k03
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   1.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   2.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   2.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   2.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   2.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   2.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.7  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 524 SGVLCSYYTPIFDTYPISLQPYF 456
           +G LC+ Y P+    P+ L P F
Sbjct: 167 AGFLCNNYLPLPQVPPLPLPPIF 189


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 524 SGVLCSYYTPIFDTYPISLQPYF 456
           +G LC+ Y P+    P+ L P F
Sbjct: 167 TGFLCNNYPPLPQVPPLPLPPIF 189


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 584 PVLHCNHQDYQEKSPHVNLESGVLCSYY 501
           P  + N+Q  Q  S + N + G  C YY
Sbjct: 209 PQFNFNYQYNQAYSNYNNYQEGFSCQYY 236


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 584 PVLHCNHQDYQEKSPHVNLESGVLCSYY 501
           P  + N+Q  Q  S + N + G  C YY
Sbjct: 229 PQFNFNYQYNQAYSNYNNYQEGFSCQYY 256


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 479  DKYQKLGCNMSIKLHFLDSHVDFFPDN 559
            DKY +L  N S +  F+   VDF   N
Sbjct: 1909 DKYSRLVNNPSARRRFIAHVVDFIETN 1935


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 668 SSNQPSYSHSIDLGTLSP*FLCPD 597
           S  +P  SH+ DLG L    L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 668 SSNQPSYSHSIDLGTLSP*FLCPD 597
           S  +P  SH+ DLG L    L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 668 SSNQPSYSHSIDLGTLSP*FLCPD 597
           S  +P  SH+ DLG L    L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 668 SSNQPSYSHSIDLGTLSP*FLCPD 597
           S  +P  SH+ DLG L    L PD
Sbjct: 427 SITEPGVSHADDLGYLFTNLLTPD 450


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 668 SSNQPSYSHSIDLGTLSP*FLCPD 597
           S  +P  SH+ DLG L    L PD
Sbjct: 426 SITEPGVSHADDLGYLFTNLLTPD 449


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 677 SVTSSNQPSYSHSIDL 630
           SVT  N P Y+ SID+
Sbjct: 219 SVTGQNAPLYASSIDV 234


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 440 KHPDYKNKVANLLDKYQK 493
           +H +  NK+ NL+D++ +
Sbjct: 211 EHQNLHNKICNLIDEFNE 228


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 160 FFSYNVFCSYFEIFTRIPLFL 98
           ++ + +FC  F IFT   LFL
Sbjct: 262 YYMHLLFCCAFIIFTMHLLFL 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,431
Number of Sequences: 336
Number of extensions: 3734
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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