Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2k02
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-492|AAF59197.3|  877|Drosophila melanogaster CG30497-PA...    31   2.2  
AY089554-1|AAL90292.1|  201|Drosophila melanogaster LD38749p pro...    29   5.1  

>AE013599-492|AAF59197.3|  877|Drosophila melanogaster CG30497-PA,
           isoform A protein.
          Length = 877

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
 Frame = +2

Query: 248 KIQNNDDGTNNRSNVGITNKCLDDTFYATHQ--LGLNVESQNDQLDKMKEVTTNVLVESS 421
           K+ NN++  NN++N G + K   +     ++   G   + Q+ +  K  +     +   S
Sbjct: 33  KLSNNNNYNNNKTNKGQSTKPNSNNNSGNNKKNAGKGNQQQSQRSGKKAKPQRQQIFLQS 92

Query: 422 IPSDCS--QSNRFKNEYFHTHNVTGQACSPNIEDSLLLKHKTDTHYTQSCGNVKVVNVDR 595
           +P D S  +SN F+N      N +  +   +   S    + +DT  T   G  K+   + 
Sbjct: 93  LPRDSSNYRSNSFRNSIDINSNSSNMSSKSSSNMSSNSSNISDTLATLDSGVGKINPAEL 152

Query: 596 KTKTDSLGGLIFNSINLLNDXNLTPCAFT--RESSSSTVTELSRTQSTTS 739
            T   ++     +  ++++       A T    +SSS+ +  S + S+TS
Sbjct: 153 LTAALAVPCAKCSKPSMISGLTTAVTASTVPASASSSSASASSFSSSSTS 202


>AY089554-1|AAL90292.1|  201|Drosophila melanogaster LD38749p
           protein.
          Length = 201

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
 Frame = +2

Query: 248 KIQNNDDGTNNRSNVGITNKCLDDTFYATHQ--LGLNVESQNDQLDKMKEVTTNVLVESS 421
           K+ NN++  NN++N G + K   +     ++   G   + Q+ +  K  +     +   S
Sbjct: 33  KLSNNNNYNNNKTNKGQSTKPNSNNNSGNNKKNAGKGNQQQSQRSGKKAKPQRQQIFLQS 92

Query: 422 IPSDCS--QSNRFKNEYFHTHNVTGQACSPNIEDSLLLKHKTDTHYTQSCGNVKV 580
           +P D S  +SN F+N      N +  +   +   S    + +DT  T   G  K+
Sbjct: 93  LPRDSSNYRSNSFRNSIDINSNSSNMSSKSSSNMSSNSSNISDTLATLDSGVGKI 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,539,521
Number of Sequences: 53049
Number of extensions: 540239
Number of successful extensions: 1698
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)