Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2j23
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0170 + 21482962-21483018,21483133-21483183,21483313-214835... 162 2e-40
07_01_0658 + 4923205-4923334,4923448-4923526,4923629-4923723,492... 77 2e-14
02_01_0523 - 3792864-3792962,3793509-3793610,3793861-3793974,379... 47 1e-05
02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881 36 0.020
12_02_0674 - 21745321-21746223,21746229-21747608 33 0.14
12_01_0537 - 4215833-4216005,4216168-4216366,4216399-4216497,421... 33 0.19
12_01_0536 - 4212206-4212369,4212476-4212629,4212713-4212811,421... 33 0.19
07_03_0878 - 22251023-22251166,22251279-22251329,22251425-222515... 32 0.33
07_03_0879 - 22256033-22256173,22256417-22256492,22256830-222572... 29 2.3
06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397 29 3.1
04_04_0348 + 24568834-24568904,24569019-24569148,24569310-245694... 29 4.1
02_05_0314 + 27818077-27818809,27818839-27818906,27819345-278195... 29 4.1
05_03_0129 + 8757718-8758072,8759422-8759531 28 5.4
01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216... 28 5.4
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 28 7.1
06_01_0949 - 7317123-7317425,7317548-7317883,7317969-7318364 28 7.1
01_05_0423 + 22032940-22033695 28 7.1
07_01_0759 + 5838726-5838879,5839654-5839778,5840168-5840264,584... 27 9.4
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 27 9.4
01_07_0218 + 42073425-42073561,42073714-42073743,42073957-420741... 27 9.4
>03_05_0170 +
21482962-21483018,21483133-21483183,21483313-21483500,
21483587-21483671,21483848-21483902,21483998-21484041,
21485045-21485113,21485207-21485307,21485396-21485452,
21485540-21485636
Length = 267
Score = 162 bits (394), Expect = 2e-40
Identities = 78/160 (48%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +3
Query: 159 DQYYDVALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEIDKKVEDTLVGGLSKAFPDH 338
+Q+ VA+ K G +I + K+ K +DLVTE DK ED + L K +PDH
Sbjct: 4 EQFLAVAVDAAKNAGEIIRKGFYQTKNVEHKG-QVDLVTETDKACEDLIFNHLRKHYPDH 62
Query: 339 KFIGEE-SVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYN 515
KFIGEE S A G +LTD PTWI+DP+DGT NFVHGFP +S+GLT+ K P VG++YN
Sbjct: 63 KFIGEETSAALGATADLTDDPTWIVDPLDGTTNFVHGFPFVCVSIGLTVGKIPTVGVVYN 122
Query: 516 PILGQMFTAKKGQGAFLNETQIHVSQVKEFATALVTFEAG 635
PI+ ++FTA +G+GAFLN + I S E AL+ E G
Sbjct: 123 PIMNELFTAVRGKGAFLNGSPIKTSSQNELVKALLVTEVG 162
>07_01_0658 +
4923205-4923334,4923448-4923526,4923629-4923723,
4923802-4923851,4924216-4924340,4924703-4924769,
4924871-4924960,4925281-4925392,4925597-4925667
Length = 272
Score = 76.6 bits (180), Expect = 2e-14
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Frame = +3
Query: 156 VDQYYDVALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEIDKKVEDTLVGGLSKAFPD 335
V++ +VA G ++ ++ + K D VT D++ E+ +V + K+FP
Sbjct: 9 VERLVEVAQRAADAAGEVLRKYFRQRVEIIDKE-DQSPVTIADREAEEAMVSVILKSFPS 67
Query: 336 HKFIGEESVADGTKC-ELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIY 512
H GEE+ G +C E + W++DP+DGT +F+ G P + L +PV+GII
Sbjct: 68 HAVFGEEN---GWRCVEKSADYVWVLDPIDGTKSFITGKPLFGTLISLLYKGKPVIGIID 124
Query: 513 NPILGQMFTAKKGQGAFLNETQIHVSQVKEFATA 614
PIL + + G LN +I V A A
Sbjct: 125 QPILRERWVGVDGMKTTLNGQEISVRPCNVLAQA 158
>02_01_0523 -
3792864-3792962,3793509-3793610,3793861-3793974,
3794060-3794158,3794725-3794779,3795266-3795433,
3795668-3795735,3796133-3796195,3796425-3796703
Length = 348
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/101 (29%), Positives = 46/101 (45%)
Frame = +3
Query: 207 LISEHINGCKSFVLKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHKFIGEESVADGTKCEL 386
+I E +N ++ K DLVT+ DK E ++ + K FPDH +GEE G +
Sbjct: 115 VIMEAVNKPRNIHYKGV-ADLVTDTDKLSESVILEVVRKTFPDHLILGEEG---GLIGDA 170
Query: 387 TDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGII 509
W IDP+ F F S+S+G+ +P +
Sbjct: 171 LSEYLWCIDPLGLATLFSLRFTTFSVSIGVLFRGKPAASTV 211
>02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881
Length = 463
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 402 WIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNP 518
W++DPVDGT+ FV G + ++++ L + E V+G++ P
Sbjct: 224 WVLDPVDGTLGFVRGDQY-AVALALIEDGEVVLGVLGCP 261
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/76 (32%), Positives = 34/76 (44%)
Frame = -2
Query: 427 VPSTGSMIHVGESVNSHFVPSATDSSPINLWSGKALERPPTSVSSTFLSISVTRSMSHDF 248
+PST S + + +PS T +SP++ +GK P TS ST S S
Sbjct: 556 IPSTPSTCELSTATGK--IPSTTCTSPLSTATGKTSSTPSTSPLST--------STSKTS 605
Query: 247 STKDLQPLMCSLIRFP 200
ST PL S I+ P
Sbjct: 606 STPSTSPLSSSTIKIP 621
>12_01_0537 -
4215833-4216005,4216168-4216366,4216399-4216497,
4216599-4216809,4217264-4217466,4217557-4217633,
4217874-4217949,4218342-4218425
Length = 373
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 264 DLVTEIDKKVEDTLV--GGLSKAFPDHKFIGEESVADGTKCELTDSPTWIIDPVDGTMNF 437
+++ I + V +T+V G S F + ++ DG W++DP+DGT F
Sbjct: 91 EILENITELVNETIVDDGTYSIYFSKEGILS--AIDDGKSEGGPSGRHWVLDPIDGTKGF 148
Query: 438 VHGFPHSSISVGLTINKEPVVGIIYNPIL 524
+ G + +I++ L + V+G++ P L
Sbjct: 149 LRGDQY-AIALALLDEGKVVLGVLACPNL 176
>12_01_0536 -
4212206-4212369,4212476-4212629,4212713-4212811,
4212917-4213124,4214437-4214639,4214728-4214801,
4214968-4215043,4215256-4215360
Length = 360
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +3
Query: 264 DLVTEIDKKVEDTLVGGLSKAFPDHKFIGEESVA-DGTKCELTDSPT-WIIDPVDGTMNF 437
+++ I K V +T++ S + K + VA DG K E S WI+DP+DGT F
Sbjct: 97 EMLGHITKLVNETIINDGSYSITLSK--EDVLVAIDGGKSEGGPSGRYWILDPIDGTKGF 154
Query: 438 VHGFPHSSISVGLTINKEPVVGIIYNPIL 524
+ G + +I + L + V+G + P L
Sbjct: 155 IRGDQY-AIGLALLDEGKVVLGAMACPNL 182
>07_03_0878 -
22251023-22251166,22251279-22251329,22251425-22251500,
22251847-22252229,22252983-22253042,22253133-22253368,
22253457-22253559,22254692-22254824,22254930-22255039
Length = 431
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 WIIDPVDGTMNFVHGFPH-SSISVGLTINKEPVVGIIYNP 518
W++DP+DGT F+ G + + L +N++ V G++ P
Sbjct: 194 WVLDPIDGTKGFLGGDDALYVVGLALVVNEKVVAGVMGCP 233
>07_03_0879 -
22256033-22256173,22256417-22256492,22256830-22257212,
22257924-22257983,22258073-22258303,22258475-22258562,
22259265-22259365,22259586-22259727,22259824-22259939
Length = 445
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 366 DGTKCELTDSPTWIIDPVDGTMNFVH-GFPHSSISVGLTINKEPVVGIIYNP 518
D + + W++DP+DGT F + + L +N + V G++ +P
Sbjct: 214 DSASFDSNPATYWVLDPIDGTQGFSKVDDTLYVVGLALVVNGKVVAGVMGSP 265
>06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397
Length = 851
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 48 ICNIFSFSTHNLIIKKY*NKSQKTIIELVKLKMTDKVDQYYDVALSLVKTCGNLISEHIN 227
+CN +F LII +K Q+ + L K+K+T V Y A + G L+ ++
Sbjct: 227 VCNTIAFVASLLIIMLLLDKKQRIFLPLDKIKITITVRTYVLYAYITIALLG-LVGAYVA 285
Query: 228 G 230
G
Sbjct: 286 G 286
>04_04_0348 +
24568834-24568904,24569019-24569148,24569310-24569459,
24569546-24569650,24569808-24570029,24570162-24570274,
24570371-24570470,24571125-24571325,24571401-24571549,
24571624-24571765,24571851-24571991,24572098-24572286,
24572622-24572835,24573198-24573291,24573671-24573905,
24574242-24574433,24574919-24575017,24575443-24575532,
24575709-24575912,24575994-24576269,24576974-24577096,
24577453-24577608,24577686-24577802,24577878-24577957,
24578173-24578377,24578485-24578687,24578882-24578933
Length = 1350
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Frame = -2
Query: 502 PTTGSLLIVRPTDIELCGKPCTK---FIVPSTGSMI--HVGESVNSHFVPSATDSSPINL 338
P G +L+ D T+ F S+ S++ ++G+++ + +P+ PI L
Sbjct: 516 PKNGEILVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIEL 575
Query: 337 WSGKALER---PPTSVSSTFLSISVTRSMSHDFSTKDLQP-LMC 218
W+GK L P + + FL+++V + L+P MC
Sbjct: 576 WTGKQLFSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMC 619
>02_05_0314 +
27818077-27818809,27818839-27818906,27819345-27819528,
27819700-27819800,27820479-27820586,27820728-27820946
Length = 470
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 150 DKVDQYYDVALSLVKTCGNLISEHINGC 233
D VDQY ++ S+ K C + +S H+N C
Sbjct: 56 DDVDQYSPIS-SVAKICTHPLSSHVNHC 82
>05_03_0129 + 8757718-8758072,8759422-8759531
Length = 154
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 469 TDIELCGKPCTKFIVPSTGSMIHVGESVNSHFVPSAT 359
+ ++L PC K + S+I + + VN H +PS +
Sbjct: 65 SQVDLLAVPCDKEELCDNASLISIPQLVNEHAIPSVS 101
>01_07_0370 -
43119049-43120278,43121376-43121420,43121421-43121662,
43121908-43122686,43123123-43123463,43123565-43123785,
43123866-43124176,43124257-43124516,43124836-43124918,
43124940-43125036,43125132-43125305,43126215-43126592
Length = 1386
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 296 FNFFIYFSHQIYVT*FQYEGFTTINVLTNKVSTSFYQGQSNVVVLVNFISHFQF 135
FN + ++ + V + G ++ NK SF G + VL NF+ HF F
Sbjct: 812 FNPLLAYTISLIVVAYYRIGVRDVHDEVNKYC-SFIVGMGIITVLANFLQHFYF 864
>12_02_0973 +
24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 27.9 bits (59), Expect = 7.1
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Frame = +3
Query: 186 LVKTCGNL---ISEHINGCKSFVLK-SCDIDLVTEIDKKVEDTL-VGGLSKAF---PDHK 341
LV C +L +S GCKS V C D + + KV+ ++ +G LS F DH
Sbjct: 303 LVFICWSLWRFMSSRSRGCKSSVQNFPCASD---DSEIKVQFSICLGELSVTFLPLSDHH 359
Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGI 506
F G + +G K D+P+ + ++ + GF S + K V GI
Sbjct: 360 FTGTPKLNNGNKAYHIDTPSVHLVIKSSSILYTDGFTTQSFFFVIGELKADVSGI 414
>06_01_0949 - 7317123-7317425,7317548-7317883,7317969-7318364
Length = 344
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 375 KCELTDSPTWIID-PVDGTMNFVHG 446
KC + D P I + P DGT+NFV G
Sbjct: 205 KCSVLDLPQAISEAPADGTVNFVAG 229
>01_05_0423 + 22032940-22033695
Length = 251
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 351 EESVADGTKCELTDSPTWIIDPVDGTMNFVHG 446
EE D K + +S W+IDP+ G V G
Sbjct: 90 EELRDDAMKSVVYESDAWVIDPLGGAAGIVKG 121
>07_01_0759 +
5838726-5838879,5839654-5839778,5840168-5840264,
5840948-5841421,5842017-5842354,5843039-5843197,
5843273-5843311
Length = 461
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/69 (23%), Positives = 28/69 (40%)
Frame = +3
Query: 267 LVTEIDKKVEDTLVGGLSKAFPDHKFIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHG 446
L++ D + V + P + +++V DG C SP + + G NF G
Sbjct: 68 LISACDAANSENEVSQVVSGIPHDQKQSDDNV-DGRPCNSIFSPAYHLQKECGASNFAKG 126
Query: 447 FPHSSISVG 473
H ++G
Sbjct: 127 LEHKGDTLG 135
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -2
Query: 403 HVGESVNSHFVPSATDSSPINLWSGKALERPPTSVSSTFLSISVTRSMSHDFSTKDLQPL 224
H GE+ SH PS + S + G +L+ PP + L I T S K +PL
Sbjct: 717 HTGETTESHINPSHSHSLSWDTPLGFSLDVPPGFTKAHRLPIVSTAGSETVVSEK--KPL 774
Query: 223 MCSLIRFPQV 194
+ + P+V
Sbjct: 775 IKFTLNVPRV 784
>01_07_0218 +
42073425-42073561,42073714-42073743,42073957-42074137,
42074742-42074806,42075374-42075545,42076570-42076769,
42076872-42076944,42077150-42077401
Length = 369
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 79 LCVEKEKILQINFHEERKRNNFLNS 5
L ++EK+LQ + HE+ R N+ NS
Sbjct: 112 LAAKREKLLQQDVHEDESRLNYENS 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,134,569
Number of Sequences: 37544
Number of extensions: 299476
Number of successful extensions: 677
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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