SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j23
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-13|CAN86622.2|  282|Caenorhabditis elegans Hypothetical p...   148   3e-36
AB303039-1|BAF62083.1|  282|Caenorhabditis elegans inositol-1(or...   148   3e-36
Z71259-12|CAA95791.3|  285|Caenorhabditis elegans Hypothetical p...   145   2e-35
AB303038-1|BAF62082.1|  285|Caenorhabditis elegans inositol-1(or...   145   2e-35
AL032655-9|CAA21725.3|  339|Caenorhabditis elegans Hypothetical ...    37   0.014
AL032655-8|CAH60799.1|  348|Caenorhabditis elegans Hypothetical ...    37   0.014
U40799-1|AAA81479.1|  250|Caenorhabditis elegans Hypothetical pr...    31   0.52 
Z77661-5|CAB01182.1|  343|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z81117-5|CAB03321.1|  279|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z71259-13|CAN86622.2|  282|Caenorhabditis elegans Hypothetical
           protein F13G3.5b protein.
          Length = 282

 Score =  148 bits (359), Expect = 3e-36
 Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
 Frame = +3

Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
           + D A+ LVK  G L+    +  +S V  KS + DLVTE D+ VE  L+ GLS+ F  H+
Sbjct: 13  FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72

Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
           FIGEESVA G K E TD+PTWIIDP+DGT NFVH  P  +I VGL I K+   GI+YNPI
Sbjct: 73  FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132

Query: 522 LGQMFTAKKGQGAFLNETQIHVSQVKEFATALVTFEAG 635
             +++ A+ G+GAF N   I  S+ +  A +++  + G
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASKNQFIAESVLILQLG 170


>AB303039-1|BAF62083.1|  282|Caenorhabditis elegans inositol-1(or
           4)-monophosphatase protein.
          Length = 282

 Score =  148 bits (359), Expect = 3e-36
 Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
 Frame = +3

Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
           + D A+ LVK  G L+    +  +S V  KS + DLVTE D+ VE  L+ GLS+ F  H+
Sbjct: 13  FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72

Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
           FIGEESVA G K E TD+PTWIIDP+DGT NFVH  P  +I VGL I K+   GI+YNPI
Sbjct: 73  FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132

Query: 522 LGQMFTAKKGQGAFLNETQIHVSQVKEFATALVTFEAG 635
             +++ A+ G+GAF N   I  S+ +  A +++  + G
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASKNQFIAESVLILQLG 170


>Z71259-12|CAA95791.3|  285|Caenorhabditis elegans Hypothetical
           protein F13G3.5a protein.
          Length = 285

 Score =  145 bits (352), Expect = 2e-35
 Identities = 73/144 (50%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
 Frame = +3

Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
           + D A+ LVK  G L+    +  +S V  KS + DLVTE D+ VE  L+ GLS+ F  H+
Sbjct: 13  FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72

Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
           FIGEESVA G K E TD+PTWIIDP+DGT NFVH  P  +I VGL I K+   GI+YNPI
Sbjct: 73  FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132

Query: 522 LGQMFTAKKGQGAFLNETQIHVSQ 593
             +++ A+ G+GAF N   I  S+
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASK 156


>AB303038-1|BAF62082.1|  285|Caenorhabditis elegans inositol-1(or
           4)-monophosphatase protein.
          Length = 285

 Score =  145 bits (352), Expect = 2e-35
 Identities = 73/144 (50%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
 Frame = +3

Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
           + D A+ LVK  G L+    +  +S V  KS + DLVTE D+ VE  L+ GLS+ F  H+
Sbjct: 13  FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72

Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
           FIGEESVA G K E TD+PTWIIDP+DGT NFVH  P  +I VGL I K+   GI+YNPI
Sbjct: 73  FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132

Query: 522 LGQMFTAKKGQGAFLNETQIHVSQ 593
             +++ A+ G+GAF N   I  S+
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASK 156


>AL032655-9|CAA21725.3|  339|Caenorhabditis elegans Hypothetical
           protein Y6B3B.5a protein.
          Length = 339

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 408 IDPVDGTMNFVHGFP-HSSISVGLTINKEPVVGIIYNPILGQMFTAKKGQGAFLNETQIH 584
           +DP+D T  F  G   + ++   + ++ EP+ G IY P   +     +G G   ++  + 
Sbjct: 156 VDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYRPFFNETIFGLQGFGVITSD-GVR 214

Query: 585 VSQVKEFATA 614
           ++ +++  TA
Sbjct: 215 LNPIEDSKTA 224


>AL032655-8|CAH60799.1|  348|Caenorhabditis elegans Hypothetical
           protein Y6B3B.5b protein.
          Length = 348

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 408 IDPVDGTMNFVHGFP-HSSISVGLTINKEPVVGIIYNPILGQMFTAKKGQGAFLNETQIH 584
           +DP+D T  F  G   + ++   + ++ EP+ G IY P   +     +G G   ++  + 
Sbjct: 165 VDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYRPFFNETIFGLQGFGVITSD-GVR 223

Query: 585 VSQVKEFATA 614
           ++ +++  TA
Sbjct: 224 LNPIEDSKTA 233


>U40799-1|AAA81479.1|  250|Caenorhabditis elegans Hypothetical
           protein F42C5.3 protein.
          Length = 250

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +3

Query: 111 QKTIIELVKLKMTDKVDQYYDVALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEIDKK 290
           Q+  I + K+K+ D    + DV ++      N + EH N  KS VLK  +ID +    +K
Sbjct: 97  QEEDIRVFKIKLLDVSKVWTDVKVNYQDYLRNTLDEHSNSNKSDVLK--EIDTLIYNKEK 154

Query: 291 VEDTLV 308
           + + L+
Sbjct: 155 LNEVLI 160


>Z77661-5|CAB01182.1|  343|Caenorhabditis elegans Hypothetical
           protein F40G12.6 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 159 DQYYDVALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEIDKKVEDTLVGG 314
           +++Y  A  +V+  G +I++  +G  S     CD D+ T    K  +TLV G
Sbjct: 90  EKHYFYAFKMVECFGKIINDQFSGNDS----KCDYDITTNNLTKKRETLVSG 137


>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
           protein T13H2.5a protein.
          Length = 2471

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 544 LAVNICPKIGL*IIPTTGSLLIVRPTDIEL 455
           L++N+CP+ GL ++      L++ P D E+
Sbjct: 684 LSMNVCPEAGLCVLKEGKKKLVIPPEDYEI 713


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
            K10G4.5 protein.
          Length = 1251

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
 Frame = +3

Query: 114  KTIIELVKLKMTDKVDQYYDV---ALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEID 284
            K ++E+ +L   D +   + V   AL  ++   N+ISE +N CK  +  S +      ID
Sbjct: 946  KEMLEIDQLNSVDYLSAEFTVGRVALKDLRDMKNVISEALNNCK-VIFNSSN---AKSID 1001

Query: 285  KKVEDTLVGGLSKAFPDHKFIGEESVADGTKCELTDS 395
             +  D L G       +H       V D  +C++ D+
Sbjct: 1002 DRGLDELFG---PRIQEHSSYDWRCVDDNIECKIYDT 1035


>Z81117-5|CAB03321.1|  279|Caenorhabditis elegans Hypothetical
           protein T06E6.11 protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 323 FRKTANQCVFNFFIYFSHQIYV 258
           F+ T N+C + F++ F H  YV
Sbjct: 160 FKCTVNECYYGFWLSFEHYSYV 181


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
            ZK1067.2 protein.
          Length = 2219

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 460  ELCGKPCT---KFIVPSTGSMIHVGESVNSHFVPSATD 356
            E+CG+PCT     +V  T    H  + V S F+P  TD
Sbjct: 1687 EICGQPCTVECMEVVNVTLGCSHSQDVVCSSFMPGMTD 1724


>U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical
           protein T25F10.4 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +1

Query: 304 WLAVFLKPFPTTSLLVRSQSQTGRNAS*QTHQHGSSIQLMEQ*TSCTVFRTAQYRW 471
           W ++F     TT++L++S++ TGR       +H   + L E+ +S  +     + W
Sbjct: 2   WWSLFF--LATTAILIKSENSTGRTDILVIAEHPKFLSLNEEKSSLEISFEICFEW 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,752,329
Number of Sequences: 27780
Number of extensions: 286675
Number of successful extensions: 784
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -