BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2j23
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71259-13|CAN86622.2| 282|Caenorhabditis elegans Hypothetical p... 148 3e-36
AB303039-1|BAF62083.1| 282|Caenorhabditis elegans inositol-1(or... 148 3e-36
Z71259-12|CAA95791.3| 285|Caenorhabditis elegans Hypothetical p... 145 2e-35
AB303038-1|BAF62082.1| 285|Caenorhabditis elegans inositol-1(or... 145 2e-35
AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical ... 37 0.014
AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical ... 37 0.014
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z77661-5|CAB01182.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.6
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81117-5|CAB03321.1| 279|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 27 8.5
U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical pr... 27 8.5
>Z71259-13|CAN86622.2| 282|Caenorhabditis elegans Hypothetical
protein F13G3.5b protein.
Length = 282
Score = 148 bits (359), Expect = 3e-36
Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
+ D A+ LVK G L+ + +S V KS + DLVTE D+ VE L+ GLS+ F H+
Sbjct: 13 FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72
Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
FIGEESVA G K E TD+PTWIIDP+DGT NFVH P +I VGL I K+ GI+YNPI
Sbjct: 73 FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132
Query: 522 LGQMFTAKKGQGAFLNETQIHVSQVKEFATALVTFEAG 635
+++ A+ G+GAF N I S+ + A +++ + G
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASKNQFIAESVLILQLG 170
>AB303039-1|BAF62083.1| 282|Caenorhabditis elegans inositol-1(or
4)-monophosphatase protein.
Length = 282
Score = 148 bits (359), Expect = 3e-36
Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Frame = +3
Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
+ D A+ LVK G L+ + +S V KS + DLVTE D+ VE L+ GLS+ F H+
Sbjct: 13 FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72
Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
FIGEESVA G K E TD+PTWIIDP+DGT NFVH P +I VGL I K+ GI+YNPI
Sbjct: 73 FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132
Query: 522 LGQMFTAKKGQGAFLNETQIHVSQVKEFATALVTFEAG 635
+++ A+ G+GAF N I S+ + A +++ + G
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASKNQFIAESVLILQLG 170
>Z71259-12|CAA95791.3| 285|Caenorhabditis elegans Hypothetical
protein F13G3.5a protein.
Length = 285
Score = 145 bits (352), Expect = 2e-35
Identities = 73/144 (50%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Frame = +3
Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
+ D A+ LVK G L+ + +S V KS + DLVTE D+ VE L+ GLS+ F H+
Sbjct: 13 FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72
Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
FIGEESVA G K E TD+PTWIIDP+DGT NFVH P +I VGL I K+ GI+YNPI
Sbjct: 73 FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132
Query: 522 LGQMFTAKKGQGAFLNETQIHVSQ 593
+++ A+ G+GAF N I S+
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASK 156
>AB303038-1|BAF62082.1| 285|Caenorhabditis elegans inositol-1(or
4)-monophosphatase protein.
Length = 285
Score = 145 bits (352), Expect = 2e-35
Identities = 73/144 (50%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Frame = +3
Query: 165 YYDVALSLVKTCGNLISEHINGCKSFV-LKSCDIDLVTEIDKKVEDTLVGGLSKAFPDHK 341
+ D A+ LVK G L+ + +S V KS + DLVTE D+ VE L+ GLS+ F H+
Sbjct: 13 FVDYAIELVKKAGTLVRTAFDSPESKVDTKSSNTDLVTETDQAVEKLLIEGLSERFKGHR 72
Query: 342 FIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPI 521
FIGEESVA G K E TD+PTWIIDP+DGT NFVH P +I VGL I K+ GI+YNPI
Sbjct: 73 FIGEESVAGGAKIEWTDAPTWIIDPIDGTTNFVHRIPMIAICVGLAIKKQIRAGIVYNPI 132
Query: 522 LGQMFTAKKGQGAFLNETQIHVSQ 593
+++ A+ G+GAF N I S+
Sbjct: 133 TNELYLAQLGKGAFKNGFPIRASK 156
>AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical
protein Y6B3B.5a protein.
Length = 339
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 408 IDPVDGTMNFVHGFP-HSSISVGLTINKEPVVGIIYNPILGQMFTAKKGQGAFLNETQIH 584
+DP+D T F G + ++ + ++ EP+ G IY P + +G G ++ +
Sbjct: 156 VDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYRPFFNETIFGLQGFGVITSD-GVR 214
Query: 585 VSQVKEFATA 614
++ +++ TA
Sbjct: 215 LNPIEDSKTA 224
>AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical
protein Y6B3B.5b protein.
Length = 348
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 408 IDPVDGTMNFVHGFP-HSSISVGLTINKEPVVGIIYNPILGQMFTAKKGQGAFLNETQIH 584
+DP+D T F G + ++ + ++ EP+ G IY P + +G G ++ +
Sbjct: 165 VDPLDATQEFTEGLTEYVTVMACIVLDAEPIFGAIYRPFFNETIFGLQGFGVITSD-GVR 223
Query: 585 VSQVKEFATA 614
++ +++ TA
Sbjct: 224 LNPIEDSKTA 233
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 111 QKTIIELVKLKMTDKVDQYYDVALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEIDKK 290
Q+ I + K+K+ D + DV ++ N + EH N KS VLK +ID + +K
Sbjct: 97 QEEDIRVFKIKLLDVSKVWTDVKVNYQDYLRNTLDEHSNSNKSDVLK--EIDTLIYNKEK 154
Query: 291 VEDTLV 308
+ + L+
Sbjct: 155 LNEVLI 160
>Z77661-5|CAB01182.1| 343|Caenorhabditis elegans Hypothetical
protein F40G12.6 protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 159 DQYYDVALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEIDKKVEDTLVGG 314
+++Y A +V+ G +I++ +G S CD D+ T K +TLV G
Sbjct: 90 EKHYFYAFKMVECFGKIINDQFSGNDS----KCDYDITTNNLTKKRETLVSG 137
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 544 LAVNICPKIGL*IIPTTGSLLIVRPTDIEL 455
L++N+CP+ GL ++ L++ P D E+
Sbjct: 684 LSMNVCPEAGLCVLKEGKKKLVIPPEDYEI 713
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical protein
K10G4.5 protein.
Length = 1251
Score = 27.5 bits (58), Expect = 8.5
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +3
Query: 114 KTIIELVKLKMTDKVDQYYDV---ALSLVKTCGNLISEHINGCKSFVLKSCDIDLVTEID 284
K ++E+ +L D + + V AL ++ N+ISE +N CK + S + ID
Sbjct: 946 KEMLEIDQLNSVDYLSAEFTVGRVALKDLRDMKNVISEALNNCK-VIFNSSN---AKSID 1001
Query: 285 KKVEDTLVGGLSKAFPDHKFIGEESVADGTKCELTDS 395
+ D L G +H V D +C++ D+
Sbjct: 1002 DRGLDELFG---PRIQEHSSYDWRCVDDNIECKIYDT 1035
>Z81117-5|CAB03321.1| 279|Caenorhabditis elegans Hypothetical
protein T06E6.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 323 FRKTANQCVFNFFIYFSHQIYV 258
F+ T N+C + F++ F H YV
Sbjct: 160 FKCTVNECYYGFWLSFEHYSYV 181
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
ZK1067.2 protein.
Length = 2219
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 460 ELCGKPCT---KFIVPSTGSMIHVGESVNSHFVPSATD 356
E+CG+PCT +V T H + V S F+P TD
Sbjct: 1687 EICGQPCTVECMEVVNVTLGCSHSQDVVCSSFMPGMTD 1724
>U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical
protein T25F10.4 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 304 WLAVFLKPFPTTSLLVRSQSQTGRNAS*QTHQHGSSIQLMEQ*TSCTVFRTAQYRW 471
W ++F TT++L++S++ TGR +H + L E+ +S + + W
Sbjct: 2 WWSLFF--LATTAILIKSENSTGRTDILVIAEHPKFLSLNEEKSSLEISFEICFEW 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,752,329
Number of Sequences: 27780
Number of extensions: 286675
Number of successful extensions: 784
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -