Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j22
         (203 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   3.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   3.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   4.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    19   4.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   5.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       19   6.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    19   6.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   6.9  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    19   6.9  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    18   9.2  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 1.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 96  NGIFEHDFEPFQNVR 140
           N ++E DF+ F+N +
Sbjct: 282 NSLYELDFDTFRNTK 296


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 3.0
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 46  VRIFNTLLLTSDVCMFVTESLNTILNPFKTS 138
           V++FN +   S + +F    L+ +L  F+T+
Sbjct: 237 VKLFNEVFGVSLLVLFGNSFLSIVLALFRTA 267


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 3.0
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 46  VRIFNTLLLTSDVCMFVTESLNTILNPFKTS 138
           V++FN +   S + +F    L+ +L  F+T+
Sbjct: 255 VKLFNEVFGVSLLVLFGNSFLSIVLALFRTA 285


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.4 bits (38), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 112 CSKIPLQTYIR 80
           CS+  LQTY+R
Sbjct: 535 CSRGDLQTYLR 545


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 19.4 bits (38), Expect = 4.0
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = -1

Query: 137 DVLKGFKIVFKDSVTNIHTSEVNKSVLK 54
           +VL  FKI +KD    + +S+++  +++
Sbjct: 127 NVLTVFKIRYKDLNKALESSKISVGLIR 154


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 5.3
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 203 FFFCKCFII 177
           ++FC+ FII
Sbjct: 299 YYFCRAFII 307


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 18.6 bits (36), Expect = 6.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 73  TSDVCMFVTESL 108
           ++DVC+ + ESL
Sbjct: 117 SNDVCLAIPESL 128


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 18.6 bits (36), Expect = 6.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 125 GFKIVFKDSVTNIH 84
           G+K+V+ D+  N H
Sbjct: 310 GWKVVWDDTQKNTH 323


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 18.6 bits (36), Expect = 6.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 107 KDSVTNIHTSEVN 69
           K+SV ++H+ +VN
Sbjct: 104 KNSVGSVHSRDVN 116


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 18.6 bits (36), Expect = 6.9
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 200 FFCKCFIII 174
           FFC  FI++
Sbjct: 52  FFCSLFIVV 60


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 18.2 bits (35), Expect = 9.2
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -1

Query: 86  HTSEVNKSVLKIRTKHTDP 30
           H   +NK  +K+   + DP
Sbjct: 133 HNLSLNKCFVKVPRHYDDP 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,034
Number of Sequences: 336
Number of extensions: 677
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2479423
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)