Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j22
         (203 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   1.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   3.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   3.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   3.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   5.9  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 76  SDVCMFVTESLNTILNPFKTSD 141
           SD C    +S+N ++  F  S+
Sbjct: 352 SDSCCLCLDSMNAVIRNFNESE 373


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 70  LTSDVCMFVTESLNTILNPFKT 135
           L  D    VTE  N ++N FKT
Sbjct: 119 LEPDFTSDVTERDNHLVNAFKT 140


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 FQNVRLTRNLVYLLRT 173
           F+N+    N VY+LRT
Sbjct: 263 FENILSHINTVYVLRT 278


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 19.8 bits (39), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 FQNVRLTRNLVYLLRT 173
           F+N+    N VY+LRT
Sbjct: 263 FENILSHINTVYVLRT 278


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.0 bits (37), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 111 HDFEPFQNVRLTRNLVY 161
           +DF   ++ R+T NL Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,361
Number of Sequences: 438
Number of extensions: 679
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2785926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)