Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j09
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +2

Query: 455 EVRFISLHLILRQPARISSRSQTIT----CRLP*MLSRFLSMEMSTIFTVCLQIM 607
           ++RF++ +L L+   RIS+R   I+    C L   LS+ + +  + +F V L ++
Sbjct: 198 QIRFLNQYLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKL-FNEVFGVSLLVL 251


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +2

Query: 455 EVRFISLHLILRQPARISSRSQTIT----CRLP*MLSRFLSMEMSTIFTVCLQIM 607
           ++RF++ +L L+   RIS+R   I+    C L   LS+ + +  + +F V L ++
Sbjct: 216 QIRFLNQYLRLKPEGRISNRRVFISFSKICYLHQHLSKSVKL-FNEVFGVSLLVL 269


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 574 VNDIYRLPPDYVLR 615
           V  +Y+LPP+Y +R
Sbjct: 401 VRTLYKLPPNYEIR 414


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 109 LKDIDKRCNEIKRISPNAHYEEQLK 183
           L  +D RCNEI+   P+A    QLK
Sbjct: 453 LNPLDARCNEIR---PDAICVSQLK 474


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 51  VVNSCSNIITSKPF 92
           +V+SCSNI+T   F
Sbjct: 388 MVDSCSNILTGDQF 401


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,439
Number of Sequences: 336
Number of extensions: 4089
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)