Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j09
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1907|AAM68555.1|  440|Drosophila melanogaster CG30076-P...    36   0.077
BT023923-1|ABB36427.1|  560|Drosophila melanogaster RH04128p pro...    30   3.9  
AY119563-1|AAM50217.1|  235|Drosophila melanogaster GM13889p pro...    30   3.9  
AF220363-1|AAF37264.1|  560|Drosophila melanogaster eukaryotic t...    30   3.9  
AE014297-3351|AAF56158.1|  560|Drosophila melanogaster CG10161-P...    30   3.9  
BT029283-1|ABK30920.1|  361|Drosophila melanogaster IP16005p pro...    29   5.1  
AE014134-3579|AAF57251.1|  439|Drosophila melanogaster CG15216-P...    29   6.7  

>AE013599-1907|AAM68555.1|  440|Drosophila melanogaster CG30076-PA
           protein.
          Length = 440

 Score = 35.5 bits (78), Expect = 0.077
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +1

Query: 214 VTNITVSSEDRAKFNRNKSKDSLEL--FEKTIMDLLYGEKWKERAEGYSFQ-KKEVGSDG 384
           ++++    +D+ +  +++ K  LE    E  ++D ++GEKW       SFQ    +G   
Sbjct: 341 MSSLRARLQDQQRHQKHQHKQQLEEEELEAALVDAMHGEKWPAEVAHSSFQLASPIGPSA 400

Query: 385 QVHHDALLQYPSGQVRR 435
                 L + P GQ +R
Sbjct: 401 VAFEQPLAKAPRGQYKR 417


>BT023923-1|ABB36427.1|  560|Drosophila melanogaster RH04128p
           protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = +1

Query: 346 GYSFQKKEVGSD----GQVHHDALLQYPSGQ 426
           GY ++K E+GSD     +  HD +LQ PSG+
Sbjct: 364 GYRYKKWELGSDIVLVARCEHDGVLQTPSGE 394


>AY119563-1|AAM50217.1|  235|Drosophila melanogaster GM13889p
           protein.
          Length = 235

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = +1

Query: 346 GYSFQKKEVGSD----GQVHHDALLQYPSGQ 426
           GY ++K E+GSD     +  HD +LQ PSG+
Sbjct: 39  GYRYKKWELGSDIVLVARCEHDGVLQTPSGE 69


>AF220363-1|AAF37264.1|  560|Drosophila melanogaster eukaryotic
           translation initiationfactor 3 p66 subunit protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = +1

Query: 346 GYSFQKKEVGSD----GQVHHDALLQYPSGQ 426
           GY ++K E+GSD     +  HD +LQ PSG+
Sbjct: 364 GYRYKKWELGSDIVLVARCEHDGVLQTPSGE 394


>AE014297-3351|AAF56158.1|  560|Drosophila melanogaster CG10161-PB
           protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = +1

Query: 346 GYSFQKKEVGSD----GQVHHDALLQYPSGQ 426
           GY ++K E+GSD     +  HD +LQ PSG+
Sbjct: 364 GYRYKKWELGSDIVLVARCEHDGVLQTPSGE 394


>BT029283-1|ABK30920.1|  361|Drosophila melanogaster IP16005p
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
 Frame = +1

Query: 112 KDIDKRCNEIKRISPNAHYEEQLKIIFGMTNTRNVTNITVSSEDRAKFNRNKSKDSLELF 291
           +D D + +E+ R    A  E++L++       R+  +  +  E+  K   N  K SLE+ 
Sbjct: 156 EDADTKSDEVSR--KLAFVEDELEV--AEDRVRSGESKIMELEEELKVVGNSLK-SLEVS 210

Query: 292 EKTIMDLLYGEKWKERAEGYSFQKKEVGSDGQVHHDALLQYPSGQVRRSE--LFFNRSAV 465
           E+     +  E++K   +  S + KE     + H +  ++    +V R E  LF  +   
Sbjct: 211 EEKANQRV--EEFKREMKTLSIKLKEAEQRAE-HAEKQVKRLQKEVDRLEDRLFNEKEKY 267

Query: 466 HLPPSDFTPAGQNLLKITNDYMQTAVNAFA 555
                D+T    NLL I  D+ Q + NA A
Sbjct: 268 KAICDDWTRHLPNLLDIKKDHKQNSHNALA 297


>AE014134-3579|AAF57251.1|  439|Drosophila melanogaster CG15216-PA
           protein.
          Length = 439

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 504 SPQDHKRLHADCRECFRDFCLWKCQR 581
           SP D K+L+  C  C   +C  +C+R
Sbjct: 115 SPSDAKKLYKSCHNCSHLYCSRECRR 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,070,330
Number of Sequences: 53049
Number of extensions: 713400
Number of successful extensions: 1805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)