Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j08
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    28   0.28 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   2.6  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   7.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 397 NPDVVSDPTLPRTKDHMCPKC 459
           NPD V+ PT P+ K H+CP C
Sbjct: 407 NPDYVA-PT-PKAKTHICPTC 425


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 232 IQFCQECNNMLYPREDKNNKV-LLYACRNCDYKQL 333
           I+   +CN+++YPR      V +   CR+  Y QL
Sbjct: 371 IETTSKCNDIIYPRLPSLAGVNMAMVCRSNSYPQL 405


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 275 KIKITKFCCTRAEIVIINNLRIQIA 349
           K+K  + C  +A +VI N  +IQI+
Sbjct: 2   KVKKLQHCLHKACVVIYNTXQIQIS 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,465
Number of Sequences: 2352
Number of extensions: 11980
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)