Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j07
         (479 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23QF9 Cluster: TPR Domain containing protein; n=1; Tet...    36   0.62 
UniRef50_A7R104 Cluster: Chromosome undetermined scaffold_332, w...    35   1.1  
UniRef50_UPI00006CD291 Cluster: hypothetical protein TTHERM_0026...    34   1.4  
UniRef50_A5DAH7 Cluster: Putative uncharacterized protein; n=1; ...    34   1.4  
UniRef50_A0D427 Cluster: Chromosome undetermined scaffold_37, wh...    33   2.5  
UniRef50_A7EFW5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_Q3TRE4 Cluster: Adult male hypothalamus cDNA, RIKEN ful...    33   3.3  
UniRef50_A5ZNZ3 Cluster: Sensor protein; n=1; Ruminococcus obeum...    33   3.3  
UniRef50_A6RIG8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_UPI000069F33C Cluster: Prostaglandin E2 receptor, EP1 s...    32   5.8  
UniRef50_Q82VT6 Cluster: TonB-dependent receptor protein; n=3; N...    32   7.7  
UniRef50_A5WCQ3 Cluster: Peptidase M23B; n=3; Psychrobacter|Rep:...    32   7.7  
UniRef50_Q54IM3 Cluster: Putative uncharacterized protein; n=1; ...    32   7.7  

>UniRef50_Q23QF9 Cluster: TPR Domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 772

 Score = 35.5 bits (78), Expect = 0.62
 Identities = 23/67 (34%), Positives = 34/67 (50%)
 Frame = +2

Query: 80  CVFYNSYSYLSFTFVVLVVSPSTFLSYNGELLDLAHQSG*SQNNPSKIWQIGKPVLQKSV 259
           C+  N  +Y + T+   V+S    L  + ELL L      +QN P  I QIGK   +K +
Sbjct: 402 CLNLNPKNYRALTYKAFVLSNQQKL--DEELLTLKEAISYNQNYPYSILQIGKCYFKKKM 459

Query: 260 LNESITS 280
             ++ITS
Sbjct: 460 YEDAITS 466


>UniRef50_A7R104 Cluster: Chromosome undetermined scaffold_332,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_332, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 238

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -1

Query: 377 TIVTGPAQSA--YRGFPRPGWNRRWRCDRNCLWVDLLLTRSILTFVTQVFLSAISSRGYS 204
           ++V+G   S   Y  FP P  N    CD    W+DLL +  ++ +    +  A+ S  Y+
Sbjct: 172 SVVSGMTASPVRYSSFPLPQMNSNTDCDHYKYWIDLLASERLIAWTCDRYCIALISSSYT 231


>UniRef50_UPI00006CD291 Cluster: hypothetical protein TTHERM_00266280;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00266280 - Tetrahymena thermophila SB210
          Length = 1000

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 14/32 (43%), Positives = 24/32 (75%)
 Frame = -1

Query: 158  MTEKLKETPLALQK*SSSKNMNYKTHKNSRKN 63
            + ++++E+P  +QK SS KN+NY+  +NS KN
Sbjct: 940  LMDEIEESPNIIQKPSSLKNINYQLRQNSPKN 971


>UniRef50_A5DAH7 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 445

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +2

Query: 35  RPLIARQIVHFSYYFCVFYNSYSYLSFTFVVLVVSPSTFLSYNGE 169
           R +I + I H++ +  +F+++ S L+ T +  +V P    SYNG+
Sbjct: 167 RTIIEQPIYHYNLFAKMFFSAISNLNSTTIGYIVPPKAIRSYNGD 211


>UniRef50_A0D427 Cluster: Chromosome undetermined scaffold_37, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_37,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 865

 Score = 33.5 bits (73), Expect = 2.5
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +2

Query: 101 SYLSFTFVVLVVSPSTFLSYNGELLDLAHQSG*SQNNPSKIWQIGKPVLQKSVL---NES 271
           +YL    +V  +  +  L   G+L+DL  Q      +  K  Q G P  QK +L   +ES
Sbjct: 304 TYLKSLQIVNELKVNPKLELKGQLIDLVFQLIKQTRDIQKTLQYGLPFTQKVILKFNSES 363

Query: 272 ITSLPTNNYDRSATSDSTQVAE 337
           +T+L    YD+S  ++  Q  E
Sbjct: 364 VTNLVYKFYDKSFFNNILQRIE 385


>UniRef50_A7EFW5 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 573

 Score = 33.5 bits (73), Expect = 2.5
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -2

Query: 454 IQYKILSSSA*RRSQLDIRHPSPQGSP**PVLRSPHTGDF 335
           I ++++S +  RRSQLDIR P P G    P +R  H G F
Sbjct: 50  ISWRLISHALTRRSQLDIRTPEPGGGIWAPTIRE-HNGWF 88


>UniRef50_Q3TRE4 Cluster: Adult male hypothalamus cDNA, RIKEN
           full-length enriched library, clone:A230058I09
           product:methyl-CpG binding domain protein 1, full insert
           sequence; n=6; Mus musculus|Rep: Adult male hypothalamus
           cDNA, RIKEN full-length enriched library,
           clone:A230058I09 product:methyl-CpG binding domain
           protein 1, full insert sequence - Mus musculus (Mouse)
          Length = 298

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = -1

Query: 335 PRPGWNRRWRC-DRNCLWV 282
           PRPG  R+WRC  R C WV
Sbjct: 273 PRPGLKRQWRCLQRRCFWV 291


>UniRef50_A5ZNZ3 Cluster: Sensor protein; n=1; Ruminococcus obeum
           ATCC 29174|Rep: Sensor protein - Ruminococcus obeum ATCC
           29174
          Length = 979

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 18/59 (30%), Positives = 32/59 (54%)
 Frame = +2

Query: 227 QIGKPVLQKSVLNESITSLPTNNYDRSATSDSTQVAEIPCMRTAQDRSLW*TLGRGVSY 403
           Q G+PVL  S+LN+++TS+PT  +  +  S +    ++      QD  L  +L  G+ +
Sbjct: 487 QQGEPVLL-SILNKTLTSMPTTQFSGAVVSYNASSRKVTAKEFIQDNLLTVSLIAGIFF 544


>UniRef50_A6RIG8 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 549

 Score = 32.7 bits (71), Expect = 4.4
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = -2

Query: 454 IQYKILSSSA*RRSQLDIRHPSPQGSP**PVLRSPHTGDF 335
           I ++++S +  RRSQLDIR P P G    P +R  H G F
Sbjct: 50  ISWRLISHALTRRSQLDIRTPEPGGGIWAPTIRE-HGGWF 88


>UniRef50_UPI000069F33C Cluster: Prostaglandin E2 receptor, EP1
           subtype (Prostanoid EP1 receptor) (PGE receptor, EP1
           subtype).; n=8; Xenopus tropicalis|Rep: Prostaglandin E2
           receptor, EP1 subtype (Prostanoid EP1 receptor) (PGE
           receptor, EP1 subtype). - Xenopus tropicalis
          Length = 352

 Score = 32.3 bits (70), Expect = 5.8
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = -1

Query: 398 TPLAPRFTIVTGPAQSAYRGFPRPGWN----RRWRCDRNCLWVDLLLTRSILTFVTQVFL 231
           TPL PR T V G  +  +R   RP W     R    ++   WV +LL RS+L  +  +F+
Sbjct: 266 TPLLPRLTSVFGHTE--HRSLKRPDWLLFTVRLASLNQILPWVYILLRRSVLFRLYTIFV 323

Query: 230 SAISSR 213
            A   R
Sbjct: 324 RATRLR 329


>UniRef50_Q82VT6 Cluster: TonB-dependent receptor protein; n=3;
           Nitrosomonas europaea|Rep: TonB-dependent receptor
           protein - Nitrosomonas europaea
          Length = 803

 Score = 31.9 bits (69), Expect = 7.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 212 GYSGFTLTGGRDQGALHYMTEKLKETPL 129
           G SGF   GGR  GA++Y+T+   +TPL
Sbjct: 252 GTSGFLYGGGRVGGAVNYVTKNSTDTPL 279


>UniRef50_A5WCQ3 Cluster: Peptidase M23B; n=3; Psychrobacter|Rep:
           Peptidase M23B - Psychrobacter sp. PRwf-1
          Length = 194

 Score = 31.9 bits (69), Expect = 7.7
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -1

Query: 272 LTRSILTFVTQVFLSAISSRGYSGFTLTGGRDQGALHYMTEKLKETPLALQ 120
           + RSI + +    L+ IS+ GY  +  TG   Q   HY+++++K T L  Q
Sbjct: 14  MARSIKSLIK---LAIISALGYMAYIYTGDYQQQLRHYISDRIKYTELIQQ 61


>UniRef50_Q54IM3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 560

 Score = 31.9 bits (69), Expect = 7.7
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = -1

Query: 302 DRNCLWVDLLLTRSILTFVTQVFLSAISSRGYSGFTLTGGRDQGALHYMTEKLKETPLAL 123
           DR C   DL+  R I + +   +L+++           GG D   + Y T+ ++  P ++
Sbjct: 227 DRTCKIWDLVTGRCINSIIFPTYLTSVCLDSTETTCYVGGGD--GIIYQTDLIQLNPQSI 284

Query: 122 QK*SSSKNMNYKTHKN-SRKNVQFVARS 42
           Q  + + N N   ++N + KN    A+S
Sbjct: 285 QLLNINNNNNNNNNQNKNNKNNSLAAQS 312


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,766,866
Number of Sequences: 1657284
Number of extensions: 9167103
Number of successful extensions: 27024
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 26276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27012
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)