BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2j07
(479 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 2.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 3.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 3.4
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 22 3.4
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 22 3.4
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 21 4.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 5.9
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 5.9
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 5.9
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 7.8
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 7.8
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.2 bits (45), Expect = 2.6
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = -3
Query: 66 KCTICRAISGRPFCF 22
KC C+ +G+P C+
Sbjct: 872 KCVTCKCENGKPTCW 886
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 201 LYPDWWARSRSSPLYDRKVEGD 136
LYPDW +R+ ++ RK + D
Sbjct: 542 LYPDWSSRANATRGKKRKRKQD 563
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 3.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 201 LYPDWWARSRSSPLYDRKVEGD 136
LYPDW +R+ ++ RK + D
Sbjct: 434 LYPDWSSRANATRGKKRKRKQD 455
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 21.8 bits (44), Expect = 3.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 83 VFYNSYSYLSFTFVVLVVSPSTFLSYNGELL 175
+F+ SY Y + T+ + +V + L Y LL
Sbjct: 163 IFFASYQYGTKTYSLFIVFMTVILPYFINLL 193
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 21.8 bits (44), Expect = 3.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 83 VFYNSYSYLSFTFVVLVVSPSTFLSYNGELL 175
+F+ SY Y + T+ + +V + L Y LL
Sbjct: 163 IFFASYQYGTKTYSLFIVFMTVILPYFINLL 193
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 79 KIVGKMYNLSRDQRPPILFSDNL 11
K+V ++Y++ D P F+D L
Sbjct: 21 KVVQELYDIFGDSDRPATFADTL 43
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 5.9
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -3
Query: 189 WWARSRSSPLYDRKVEGDTTST 124
WW+ + +SP + TT+T
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTT 1063
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.0 bits (42), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 101 SYLSFTFVVLVVSPSTFLSYNGELLDL 181
SY F+FV LVV+ L N L D+
Sbjct: 184 SYNLFSFVPLVVNALDHLFLNDILSDI 210
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.0 bits (42), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 101 SYLSFTFVVLVVSPSTFLSYNGELLDL 181
SY F+FV LVV+ L N L D+
Sbjct: 140 SYNLFSFVPLVVNALDHLFLNDILSDI 166
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 20.6 bits (41), Expect = 7.8
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +1
Query: 250 KVSIERVNNKSTHKQLRSQRHLRFHPGRGNPLYADCAGPVTM-VNLGARGVLYPAENVFK 426
K ++ R+ KS + + HLR H G DC + NL A + E F+
Sbjct: 248 KPNVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFR 307
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 20.6 bits (41), Expect = 7.8
Identities = 7/25 (28%), Positives = 12/25 (48%)
Frame = +2
Query: 59 VHFSYYFCVFYNSYSYLSFTFVVLV 133
VH C++Y Y +L F ++
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCCAFII 274
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,542
Number of Sequences: 336
Number of extensions: 2501
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -