Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j06
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    27   0.38 
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    27   0.51 
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    27   0.51 
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    27   0.67 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    27   0.67 
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    25   1.6  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   1.6  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.7  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   2.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.6  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   6.3  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   8.3  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   8.3  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 489 TVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAE 629
           T+E   +FH   YL+   R EI     + ++ +K  FQ  ++ L+ E
Sbjct: 150 TLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 196


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 489 TVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAE 629
           T+E   +FH   YL+   R E+     + ++ +K  FQ  ++ L+ E
Sbjct: 231 TLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 277


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 489 TVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAE 629
           T+E   +FH   YL+   R E+     + ++ +K  FQ  ++ L+ E
Sbjct: 248 TLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 294


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +3

Query: 489 TVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAERN 635
           T+E   +FH   YL+   R EI     + ++ +K  FQ  ++  + + +
Sbjct: 18  TIELEKEFHFNRYLNRRRRIEIASMLKLTERQIKIWFQNRRMKAKKDNS 66


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 12/68 (17%), Positives = 32/68 (47%)
 Frame = +3

Query: 435 PERVRTRLTKLFQHQNGNTVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKV 614
           P + RT+      + +   +E   +FH   Y+++  + E+ Q   + ++ +K  FQ  + 
Sbjct: 209 PGKTRTKDKYRVVYTDQQRLELEKEFHYTRYITIRRKAELAQNLQLSERQVKIWFQNRRA 268

Query: 615 DLQAERNR 638
             + ++ +
Sbjct: 269 KDRKQKKK 276


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +3

Query: 435 PERVRTRLTKLFQHQNGNTVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKV 614
           P+R RT  T+   HQ    +E   +FH   YL+   R EI     + ++ +K  FQ  ++
Sbjct: 1   PKRQRTAYTR---HQ---ILELEKEFHYNXYLTRRRRIEIAHTLVLSERQIKIWFQNRRM 54


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 21/84 (25%), Positives = 37/84 (44%)
 Frame = +3

Query: 378 YLAKYAKEFHVPLPDVIIAPERVRTRLTKLFQHQNGNTVECTNDFHEFDYLSVMERFEIN 557
           ++  + K  H+    V    E  R R T   ++Q   T+E   +FH   YL+   R EI 
Sbjct: 259 HIYPWMKRVHIGQSTVNANGETKRQR-TSYTRYQ---TLELEKEFHFNRYLTRRRRIEIA 314

Query: 558 QYQNMLDQSMKDLFQRHKVDLQAE 629
               + ++ +K  FQ  ++  + E
Sbjct: 315 HALCLTERQIKIWFQNRRMKWKKE 338


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/60 (20%), Positives = 33/60 (55%)
 Frame = +3

Query: 141 KADVIILGCSLSGIVAAHKLKRRFGDSMDIVVLDLAGQTQSYSKYNVVFEDVEKDSQDII 320
           +A+++ L  S+SG++   K   + GD+++  V+ L  + +  ++   V+  +    +++I
Sbjct: 111 EAELVYLSKSISGLIQVDKPVFKPGDTVNFRVILLDTELKPPARVKSVYVTIRDPQRNVI 170


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +3

Query: 489 TVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKVDLQAE 629
           T+E   +FH   YL+   R EI     + ++ +K  FQ  ++  + E
Sbjct: 256 TLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 302


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 227 YCRVRPGGTDTKLFQV*CCLRRCRKGQPGY 316
           YC   P  T TKL  +  C    RKG+  Y
Sbjct: 790 YCAKLPSDTFTKLTPIWRCATTVRKGRKLY 819


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 9   FF*ADHGTKYCLHNNILEIFYSYFILILNTQMVQKLDETHKKSVKADVIIL 161
           F  A     YC+   +L   Y  FIL+   ++V+ L+   ++SV A + I+
Sbjct: 31  FVLASPSMTYCVLFFLLLTVYIAFILLNRIEIVRTLEGRFEESVIAYLFIV 81


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +3

Query: 480 NGNTVECTNDFHEFDYLSVMERFEINQYQNMLDQSMKDLFQRHKV 614
           N    E   +FH   YL+   R EI    ++ +  +K  FQ  ++
Sbjct: 62  NKQLTELEKEFHFNKYLTRARRIEIANALHLNETQVKIWFQNRRM 106


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/40 (25%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 252 QTQSYSKYNVVFEDVEKDSQDI--ITEPDFQGTAKQMIEN 365
           Q  SY+ + ++++ + ++S DI  I +P    T  +++ N
Sbjct: 9   QNHSYAAFQLMWQTIREESADIVLIADPYLATTNVKVLRN 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,041
Number of Sequences: 2352
Number of extensions: 13321
Number of successful extensions: 37
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)