Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j04
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   5.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.8  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.6  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = +1

Query: 61  NFIMCLSS*IVTLLDLA*IVTLRFFV*ISILKKSLTCVTLNVTATLTRKIFLIFLIQYIH 240
           N ++ LS  +  +  L   VT+ FF       K+ +   + +T  L   I L+  +QY H
Sbjct: 143 NILIHLSGLVTIVATLT--VTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCH 200

Query: 241 TVPIL 255
            + IL
Sbjct: 201 YLNIL 205


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = +1

Query: 61  NFIMCLSS*IVTLLDLA*IVTLRFFV*ISILKKSLTCVTLNVTATLTRKIFLIFLIQYIH 240
           N ++ LS  +  +  L   VT+ FF       K+ +   + +T  L   I L+  +QY H
Sbjct: 143 NILIHLSGLVTIVATLT--VTIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCH 200

Query: 241 TVPIL 255
            + IL
Sbjct: 201 YLNIL 205


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 572 LTSFTQTLFQLGTLFGSVF 628
           LT+F   LFQ G + G+V+
Sbjct: 375 LTTFLVILFQYGGIHGNVY 393


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 606 ARYSAACSSEWPRIDLEGKPS 668
           AR  A  SS  P ID+E KP+
Sbjct: 55  ARLRANDSSVDPEIDIEDKPA 75


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 361 FSKTSDDFLNEIFLWRRRGPY 299
           FSK + + LNE F      PY
Sbjct: 237 FSKQASEILNEYFYSHLSNPY 257


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 237 YVLYQKYQKNFTCQ 196
           Y  Y  YQ+ F+CQ
Sbjct: 221 YSNYNNYQEGFSCQ 234


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 237 YVLYQKYQKNFTCQ 196
           Y  Y  YQ+ F+CQ
Sbjct: 241 YSNYNNYQEGFSCQ 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,508
Number of Sequences: 336
Number of extensions: 4414
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)