Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2j04
(723 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581 47 2e-05
09_04_0598 + 18875270-18875437,18875547-18876179 34 0.099
08_01_0572 + 5090474-5090787,5090973-5091000,5092725-5092837,509... 33 0.23
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 32 0.53
04_03_0677 - 18600568-18600609,18601241-18601307,18601511-186015... 31 0.70
03_01_0256 - 1992298-1993878 30 1.6
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 30 2.1
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 29 3.7
10_08_0183 - 15522241-15523866 29 3.7
10_08_0182 + 15513693-15515273 29 3.7
03_01_0357 - 2797523-2799109 29 3.7
03_01_0355 - 2789680-2791263 29 3.7
03_01_0354 + 2785998-2787623 29 3.7
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 29 4.9
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 29 4.9
08_02_1615 + 28257275-28258428,28258523-28259144 29 4.9
08_02_1613 + 28236989-28238593 29 4.9
04_03_0634 - 18211054-18212169,18213449-18214219 29 4.9
04_01_0249 - 3284107-3286377 29 4.9
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 28 6.5
04_01_0445 + 5812277-5813893 28 6.5
04_01_0443 - 5776275-5777921 28 6.5
12_02_0261 - 16538028-16538310,16543969-16544456 28 8.6
11_06_0092 + 19973364-19975983,19976272-19976648 28 8.6
>04_04_1259 + 32171412-32171805,32173341-32174193,32174263-32174581
Length = 521
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Frame = +2
Query: 347 GCFGKYQLYLCLVVFLVKFPVAFHQMAIIFLSPKVSYICASTNN---ETCPCSDPIYDT- 514
G FG++QL ++V A H M IIF + + +CA+ + + C + T
Sbjct: 34 GEFGRWQLRHFVLVSSAWLLEALHTMVIIFADREPAMVCAAGDGRCGDRCAGAGAAAGTG 93
Query: 515 ----SVFKRTIIMEWDLICDRKWLTSFTQTLFQLGTLFGSVFFGMASDRF-GRK 661
S + + EW L+C ++ Q +F G + G+ FG SD F GRK
Sbjct: 94 WEWASGRASSTVSEWGLVCGERYKVGLVQAIFFAGCMIGAGVFGHLSDSFLGRK 147
>09_04_0598 + 18875270-18875437,18875547-18876179
Length = 266
Score = 34.3 bits (75), Expect = 0.099
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 299 IGATPSPKKDLIQKVIGCFGKYQLYLCLVVFLVKFPVAF--HQMAIIFLS 442
+ +T + KK L V G G+Y + L V L+ F VAF H +AI FL+
Sbjct: 94 LSSTYTIKKPLSDAVFGAHGEYMMALKYVALLLLFLVAFLSHSLAICFLN 143
>08_01_0572 +
5090474-5090787,5090973-5091000,5092725-5092837,
5092947-5093058
Length = 188
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +2
Query: 431 IFLSPKVSYICASTNNETCPCSDPIYDTSV-FKR---TIIMEWDLICDRKW 571
I+ SP+ +ICAS N P +DP++ TS+ F ++++W C KW
Sbjct: 125 IYASPR-DHICASLRNWALPIADPLFKTSLQFAEDAYALVLQWR--CMHKW 172
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 506 YDTSVFKRTIIM---EWDLICDRKWLTSFTQTLFQLGTLFGSVFFGMASDRFGRKT 664
YDT V ++ ++ + WL ++ G + G+ G A+DR+GR+T
Sbjct: 42 YDTGVISGALLYIRDDFPSVDKNTWLQEMIVSMAVAGAIIGAAIGGWANDRYGRRT 97
>04_03_0677 -
18600568-18600609,18601241-18601307,18601511-18601596,
18602411-18602471,18602472-18602573,18602646-18602750,
18604031-18604109,18604804-18604963
Length = 233
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 311 PSPKKDLIQKVIGCFGKYQLYLCLVVFLVKFPVA-FHQMAIIFLSPKVSYICASTNNETC 487
P +D ++K + K + +L ++ +A H I+ SP+ +ICAS +N
Sbjct: 49 PLGSQDALKKNLSPVRKRRTFLDFLILYANMSLAGIH--GDIYASPR-DHICASLHNWAL 105
Query: 488 PCSDPIYDTSVF 523
P +DP++ T +
Sbjct: 106 PIADPLFKTRFY 117
>03_01_0256 - 1992298-1993878
Length = 526
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 602 LGTLFGSVFFGMASDRFGRKTL 667
+GTL G +FFG DR GRK++
Sbjct: 79 VGTLTGQLFFGWLGDRVGRKSV 100
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 581 FTQTLFQLGTLFGSVFFGMASDRFGRKTL 667
F + +G F S+F+G+ +DR GRK +
Sbjct: 59 FLGASYMIGRCFASLFWGVVADRIGRKPI 87
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 560 DRKWLTSFTQTLFQLGTLFGSVFFGMASDRFGRK 661
D + F + +G F ++F+G+ +DR GRK
Sbjct: 83 DIGYYAGFLGASYMVGRSFAAIFWGVVADRIGRK 116
>10_08_0183 - 15522241-15523866
Length = 541
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 605 GTLFGSVFFGMASDRFGRKTL 667
GTL G +FFG D+ GRK++
Sbjct: 84 GTLAGQLFFGWLGDKLGRKSV 104
>10_08_0182 + 15513693-15515273
Length = 526
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 605 GTLFGSVFFGMASDRFGRKTL 667
GTL G +FFG D+ GRK++
Sbjct: 80 GTLAGQLFFGWLGDKLGRKSV 100
>03_01_0357 - 2797523-2799109
Length = 528
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 605 GTLFGSVFFGMASDRFGRKTL 667
GTL G +FFG D+ GRK++
Sbjct: 80 GTLAGQLFFGWLGDKLGRKSV 100
>03_01_0355 - 2789680-2791263
Length = 527
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 605 GTLFGSVFFGMASDRFGRKTL 667
GTL G +FFG D+ GRK++
Sbjct: 80 GTLAGQLFFGWLGDKLGRKSV 100
>03_01_0354 + 2785998-2787623
Length = 541
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 605 GTLFGSVFFGMASDRFGRKTL 667
GTL G +FFG D+ GRK++
Sbjct: 82 GTLSGQLFFGWLGDKLGRKSV 102
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 560 DRKWLTSFTQTLFQLGTLFGSVFFGMASDRFGRK 661
D + F + +G F S+ +GM +DR GRK
Sbjct: 62 DIGFYAGFLGASYMIGRGFASILWGMVADRIGRK 95
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 560 DRKWLTSFTQTLFQLGTLFGSVFFGMASDRFGRK 661
D + F + +G F S+ +GM +DR GRK
Sbjct: 52 DIGFYAGFLGASYMIGRGFASILWGMVADRIGRK 85
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 389 FLVKFPVAFHQMAIIFLSPKVSYICASTNNETCP 490
F+VK P A++ A I L P +S++ CP
Sbjct: 552 FIVKLPDAYNTQASILLLPSISFVSLVVVVAVCP 585
>08_02_1613 + 28236989-28238593
Length = 534
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 602 LGTLFGSVFFGMASDRFGRK 661
+GTL G +FFG D+ GRK
Sbjct: 84 VGTLSGQLFFGWLGDKLGRK 103
>04_03_0634 - 18211054-18212169,18213449-18214219
Length = 628
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 467 STNNETCPCSDPIYDTSVFKRTIIMEWDLICDRKWLT 577
S N CP +D I D S+F I++ ++C W T
Sbjct: 269 SENRRLCPVTDEILDNSIFIPNILI---MLCTALWRT 302
>04_01_0249 - 3284107-3286377
Length = 756
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 272 IFMASRENKIGATPSPKKDLIQKVIGCFGKYQLYLCLV 385
IF+ S E++I A+P KKD+ +VI Y ++L V
Sbjct: 513 IFLFSAESEIEASPKSKKDV--EVIKALSDYMMFLVAV 548
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 581 FTQTLFQLGTLFGSVFFGMASDRFGRK 661
F + +G F ++F+G+ +DR GRK
Sbjct: 44 FLGASYMVGRSFAAIFWGVVADRIGRK 70
>04_01_0445 + 5812277-5813893
Length = 538
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 605 GTLFGSVFFGMASDRFGRK 661
GTL G +FFG D+ GRK
Sbjct: 79 GTLAGQLFFGWLGDKMGRK 97
>04_01_0443 - 5776275-5777921
Length = 548
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 605 GTLFGSVFFGMASDRFGRK 661
GTL G +FFG D+ GRK
Sbjct: 79 GTLAGQLFFGWLGDKMGRK 97
>12_02_0261 - 16538028-16538310,16543969-16544456
Length = 256
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 594 CFNWARYSAACSSEWPRIDLEGKPSASGRRDSSNDG 701
C +W R + + W RIDL +A G S +DG
Sbjct: 43 CSSWRRAARDEPALWRRIDLHSDVAAHGADSSFSDG 78
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 355 WKISIVLMFSCILSKISGRIPSNGHHIFIAKSVIYL 462
W IS + +F I +K+SG +P+N + +Y+
Sbjct: 219 WNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYM 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,567,669
Number of Sequences: 37544
Number of extensions: 382429
Number of successful extensions: 791
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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