Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2j04
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    30   0.063
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    30   0.063
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.4  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   7.2  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 30.3 bits (65), Expect = 0.063
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 542 EWDLICDRK-WLTSFTQTLFQLGTLFGSVFFGMASDRF 652
           +WD I + K W  + TQ  F L   FG+V    + +RF
Sbjct: 311 QWDRILEAKVWYAAVTQVFFSLTICFGNVMMYSSYNRF 348


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 30.3 bits (65), Expect = 0.063
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 542 EWDLICDRK-WLTSFTQTLFQLGTLFGSVFFGMASDRF 652
           +WD I + K W  + TQ  F L   FG+V    + +RF
Sbjct: 311 QWDRILEAKVWYAAVTQVFFSLTICFGNVMMYSSYNRF 348


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 582  LRKHCFNWARYSAACSSEWPRIDLEGKPSASGRRDS 689
            LR++    AR       +W   DLE +  A GRRD+
Sbjct: 1035 LRENAVEIARRLQRPKPQWDEEDLEDEQKAIGRRDT 1070


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 665 GFSFQIYPRPFRRTRCRIACPVE 597
           GF F I P+ F    CR  CP +
Sbjct: 47  GFDFIIQPKIFDAGFCRGRCPTK 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,432
Number of Sequences: 2352
Number of extensions: 16882
Number of successful extensions: 243
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)