Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2j02
(731 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 63 5e-11
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 62 6e-11
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 62 1e-10
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 60 4e-10
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 58 2e-09
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 58 2e-09
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 54 2e-08
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 52 6e-08
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 51 1e-07
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 51 1e-07
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 49 8e-07
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 48 1e-06
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 47 2e-06
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 46 7e-06
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 43 4e-05
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 40 3e-04
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 40 3e-04
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 39 6e-04
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 39 8e-04
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 39 8e-04
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 36 0.008
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 36 0.008
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 35 0.010
SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces po... 30 0.39
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 29 0.52
SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3 s... 29 0.52
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 29 0.52
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 28 1.6
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 28 1.6
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 2.8
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 27 3.6
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 26 4.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 8.4
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 62.9 bits (146), Expect = 5e-11
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +3
Query: 195 RRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNK-DAKAQERFVQIVEAYNILGKPGT 371
R+ HY +L + + +D EIK A+ +L+ YHPDKN + +A+ RF ++ EAY IL P +
Sbjct: 347 RKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPES 406
Query: 372 RAQYDSITEVSTG 410
R ++DS ++ G
Sbjct: 407 RRRFDSGVDLEPG 419
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 62.5 bits (145), Expect = 6e-11
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = +3
Query: 204 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQY 383
+Y++L+L++ C+D EIK ++ +L+ + HPDKN A E F + +A+ +L P RA Y
Sbjct: 114 YYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHY 173
Query: 384 D 386
D
Sbjct: 174 D 174
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 61.7 bits (143), Expect = 1e-10
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYD 386
Y L + ++ S EIK+A+ +L+K+YHPD N D AQ++FV+I +AY +L P + +D
Sbjct: 88 YKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKAFD 147
Query: 387 S 389
+
Sbjct: 148 T 148
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 59.7 bits (138), Expect = 4e-10
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 198 RCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD--AKAQERFVQIVEAYNILGKPGT 371
R +YD+LN+ + IK ++ +L+ YHPDKN++ A+E+F ++ EAY +L P
Sbjct: 8 RDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKL 67
Query: 372 RAQYDSITEVSTGPNS 419
R +YD + +V P++
Sbjct: 68 REKYDKLGKVGAVPDA 83
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 57.6 bits (133), Expect = 2e-09
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +3
Query: 213 VLNLRRNCSDKEIKNAFIQLSKEYHPDKNK-DAKAQERFVQIVEAYNILGKPGTRAQYDS 389
+L + ++ S+ EI+ A+ QL+K++HPDKN + +AQE+F++I +A+ +L P R YD+
Sbjct: 11 ILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDA 70
Query: 390 ITE 398
E
Sbjct: 71 YGE 73
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 57.6 bits (133), Expect = 2e-09
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 204 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD--AKAQERFVQIVEAYNILGKPGTRA 377
+YD+L + + + +IK A+ +L+ +YHPDKN D A E+F +I EAY +LG R+
Sbjct: 9 YYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRS 68
Query: 378 QYDSITEVSTGP 413
QYD + P
Sbjct: 69 QYDQFGKEKAVP 80
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 54.0 bits (124), Expect = 2e-08
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYD 386
YD L +R S+ E+K A+ +L+ +YHPDKN + +++F +I AY +L P R YD
Sbjct: 8 YDCLEVRPEASEAELKKAYRKLALKYHPDKNPN--GEKKFKEISLAYEVLSDPQRRKLYD 65
Query: 387 --SITEVSTGP 413
ITE + P
Sbjct: 66 QYGITEGNAAP 76
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 52.4 bits (120), Expect = 6e-08
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYD 386
Y+VLN+ S E+K A+ +L+ +YHPDKN + A ++F +I AY IL RA YD
Sbjct: 8 YEVLNVDVTASQAELKKAYRKLALKYHPDKNPN--AGDKFKEISRAYEILADEEKRATYD 65
Query: 387 SITE 398
E
Sbjct: 66 RFGE 69
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 51.2 bits (117), Expect = 1e-07
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Frame = +3
Query: 204 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN--KDAKAQERFVQIVEAYNILGKPGTRA 377
+Y +L L++N + ++I+ ++ L+ +YHPD+N + +A +RF ++ A+ +L R
Sbjct: 13 YYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRL 72
Query: 378 QYDSITEVSTGPNSYVYKTHVPYNLRKN-AQYSYYYDFGSKAHSAKGNTNTYYSNESAKK 554
YD + +ST S YK + N K+ + Y+ Y + S+ + T ES++K
Sbjct: 73 IYDQLFGLSTRTRSQ-YKPNSTSNPSKHTSAYASYNKGKNSKWSSPFASTTKKPQESSEK 131
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 51.2 bits (117), Expect = 1e-07
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 204 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN-KDAKAQERFVQIVEAYNILGKPGTRAQ 380
+Y++L + + D+EI A+ + S +YHPDKN D KA E+F + AYN L R
Sbjct: 10 YYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKA 69
Query: 381 YDS 389
YDS
Sbjct: 70 YDS 72
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 48.8 bits (111), Expect = 8e-07
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDK---NKDAKAQERFVQIVEAYNILGKPGTRA 377
YD+L + S +EIK ++ +L+ +HPDK ++ +A ERF + EAY+IL P +R
Sbjct: 8 YDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESRE 67
Query: 378 QYD 386
YD
Sbjct: 68 MYD 70
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 48.0 bits (109), Expect = 1e-06
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Frame = +3
Query: 204 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDK---NKDAKAQERFVQIVEAYNILGKPGTR 374
+Y +LN+ S +EIK A+ + + E HPD+ + A+A E+F + EAY +L R
Sbjct: 5 YYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRR 64
Query: 375 AQYDSITEVSTG-PNSYVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGNT--NTYYSNES 545
AQYD + S+ P + P ++ Q + F ++ N + S
Sbjct: 65 AQYDRESASSSAKPRQSFFSRTNPQPQSQSQQGGPSFGFRQSFSDSQFEQVFNEMMNETS 124
Query: 546 AKKMPNYYIIFTCIGITLLGAILQGYV 626
+ + N + +T +G TL GA L G++
Sbjct: 125 TRGIANAF--WTIVG-TLAGAAL-GFI 147
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 47.2 bits (107), Expect = 2e-06
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 18/189 (9%)
Frame = +3
Query: 141 RNSDFKSLNGFIRFYSFGRRCHYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDA---- 308
RNS ++ F + Y++L L R C+ +IK +I+L K++HPDK K+A
Sbjct: 12 RNSLWRRAASFTSYSELKSLTPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLA 71
Query: 309 ---------KAQERFVQIVEAYN-ILGKPGTRAQYDSITEVSTGPNSYVYKTHVPYNLRK 458
K E + +++ A N +L R +YD P+ + TH
Sbjct: 72 PTESPPEINKHNEEYFRLLLAANALLSDKRRREEYDRFGIHWNQPS---HPTHPSPQNWS 128
Query: 459 NAQYSYYYDFGSKAHSAKGNTNTYYSNE----SAKKMPNYYIIFTCIGITLLGAILQGYV 626
A+Y Y S+ + G+ YY N + + N F G+ + IL V
Sbjct: 129 QARYPTY--SRSRRSAGMGSWEEYYYNSYDYMNDQNASNKNRKFDDEGMLVFAGILSILV 186
Query: 627 IRNMYVGQR 653
I N+Y R
Sbjct: 187 IINIYSNYR 195
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 45.6 bits (103), Expect = 7e-06
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN---KDAKAQERFVQIVEAYNILGKPGTRA 377
Y L L ++ + +IK ++ +LS+ +HPD++ + A A+E+F I AY +L P +
Sbjct: 10 YLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKE 69
Query: 378 QYDSITE 398
YD+ E
Sbjct: 70 IYDNFGE 76
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 43.2 bits (97), Expect = 4e-05
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +3
Query: 204 HYDVLNLR--RNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFV-QIVEAYNILGKPGTR 374
HY VLNL+ + +D EIK A+ + +HPDK K+ + + Q+ EAY +L R
Sbjct: 3 HYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDR 62
Query: 375 AQYDSITEVSTGPNSYVYKTHVPYNLRKNAQYSYYY 482
QY E +S+ Y + SYYY
Sbjct: 63 QQYQIKQEEE---SSHYYSIVDLSEFEELDNGSYYY 95
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAK-AQERFVQIVEAYNILGKPGTRAQY 383
Y++L + + +EIK + +L+ +YHPD+N + E F QI AYNIL R +
Sbjct: 11 YEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWH 70
Query: 384 D 386
+
Sbjct: 71 E 71
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 40.3 bits (90), Expect = 3e-04
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKDAKAQERFVQIVEAYNILGKPGTRAQYD 386
Y++L + S KEI A+ + S YHPDKN K++E + + NIL TR +YD
Sbjct: 42 YELLEVPTKASIKEINRAYRKKSILYHPDKN--PKSKELYTLLGLIVNILRNTETRKRYD 99
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 39.1 bits (87), Expect = 6e-04
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +3
Query: 204 HYDVLNLRRNCSDKEIKNAFIQLSKEYHPDKN--KDAKAQERFVQIVEAYNILGKPGTRA 377
+Y +L S EI+ +++L YHPD+N ++A+ +F I +A+ +L P R
Sbjct: 13 YYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRE 72
Query: 378 QYD 386
+D
Sbjct: 73 LFD 75
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 38.7 bits (86), Expect = 8e-04
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +3
Query: 204 HYDVLNL---RRNCSDKEIKNAFIQLSKEYHPDKNK---DAKAQERFVQIVEAYNILGKP 365
HY VL L R ++IK A ++ ++HPDK + F I +AY IL P
Sbjct: 98 HYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDP 157
Query: 366 GTRAQYDSITE 398
R Q+DS+ E
Sbjct: 158 VRRRQFDSVDE 168
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 38.7 bits (86), Expect = 8e-04
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDK----NKDAKAQERFVQIVEAYNILGKPGTR 374
Y VL + ++ SD+ I+ A+ + + ++HPD+ K +A+ F ++ AY +L R
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 375 AQYD 386
YD
Sbjct: 93 KHYD 96
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 35.5 bits (78), Expect = 0.008
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +3
Query: 249 IKNAFIQLSKEYHPD--KNKDAK-AQERFVQIVEAYNILGKPGTRAQY 383
+K+++++ K HPD + KDA AQ ++ +AYN L P TRA+Y
Sbjct: 86 LKSSYLRKMKTLHPDVAQGKDAALAQRDSAELSKAYNTLKAPLTRAEY 133
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 35.5 bits (78), Expect = 0.008
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD-AKAQERFVQIVEAYNILGKPGTRAQY 383
YDVL++ S +I+N + + S HPDKN+D KA + F + +A + L R
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92
Query: 384 DS 389
DS
Sbjct: 93 DS 94
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Frame = +3
Query: 207 YDVLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD------AKAQERFVQIVEAYNILGKPG 368
Y++L + + S +++ + +LS ++HPDK ++ + ++ +++I AY L
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159
Query: 369 TRAQY 383
TR Y
Sbjct: 160 TRENY 164
>SPAC1952.10c |||conserved fungal protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = -3
Query: 471 CTVHFYVDYKAHEFYKRKNWVQLKLQLCCHIELWCLVCQEYYTLQQSGQISLVLLHLYSC 292
C Y+ Y A + K+ +Q+ L H+ L+CL +Y+ + ++ L LY
Sbjct: 70 CMACPYLLYTAVDALLNKDVIQMSALLIFHVSLFCLSVVQYFQIFSKDPRAIFLSALY-L 128
Query: 291 LDDILYLT 268
+D I +T
Sbjct: 129 IDPIRLVT 136
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 29.5 bits (63), Expect = 0.52
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = -3
Query: 468 TVHFYVDYKAHEFYKRKNWVQLKLQLCCHIELWCLVCQEYYTLQQSGQISLVLLHLYSCL 289
+V + Y FYK +W++ + + + LW ++ + L +SGQ+ L + +
Sbjct: 361 SVEKVIAYSKLRFYKNGSWIKSTVSVVNDVPLWVVL----FYLMRSGQLDAALQFVNTYS 416
Query: 288 DD 283
DD
Sbjct: 417 DD 418
>SPBC428.20c |alp6|SPBC902.01c|gamma tubulin complex Spc98/GCP3
subunit Alp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 821
Score = 29.5 bits (63), Expect = 0.52
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 297 NKDAKAQERFVQIVEAYNILGKPGTRAQYDSITEVSTGP 413
N + + ++R +Q+V YN+ G P + D I TGP
Sbjct: 336 NMNQENKKRLIQVVSKYNVHGDPLIQELSDKILTEITGP 374
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 29.5 bits (63), Expect = 0.52
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Frame = +3
Query: 213 VLNLRRNCSDKEIKNAFIQLSKEYHPDKNKD-AKAQERFVQIVEAYNILGKPGTRAQYDS 389
V+ ++ S+ I+NA LSK++ P N +A + FV A + A +
Sbjct: 251 VIPIKPTASNASIRNAPSNLSKQFSPSGNSPLTEASKPFVPQPSAAGDFRQAKGSASHPH 310
Query: 390 ITEVSTG--PNS--YVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGN 518
+ S G PN +YKT P KN Q S +GSK A GN
Sbjct: 311 GSGSSNGVAPNGKRALYKTE-PC---KNWQISGTCRYGSKCQFAHGN 353
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 27.9 bits (59), Expect = 1.6
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 453 RKNAQYSYYYDFGSKAHS-AKGNTNTYYSNESAKKMPNYYIIFTCIGITLLGAI--LQGY 623
R +++ SYY++FGS S AK T+++ N I I I ++ I + Y
Sbjct: 478 RGHSRSSYYFEFGSIGGSPAKDGVVTFFT--GVILFQNLVPISLYISIEIVKTIQAIFIY 535
Query: 624 VIRNMYVGQRKQA-LQKSMELADELDKV 704
++MY + K A KS ++D+L +V
Sbjct: 536 FDKDMYYKKLKYACTPKSWNISDDLGQV 563
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 27.9 bits (59), Expect = 1.6
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +3
Query: 354 LGKPGTRAQYDSITEVSTG---PNSYVYKTHV----PYNLRKNAQYSYYYDFGSKAHSAK 512
LG+P TR + S+++VS G PN HV P + + GSK+ SA
Sbjct: 124 LGRPHTRQSF-SVSDVSNGSSYPNIRKNSVHVNAPMPSFPEGSTAVLLKHHSGSKSASAI 182
Query: 513 GNTNTYYSNESAKKMPNYYIIF 578
N +SN ++ + P + F
Sbjct: 183 SNIAPSHSNSTSSRRPYIHPAF 204
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 411 PNSYVYKTHVPYNLRKNAQYSYYYDF 488
PN+ Y +H P KN QY+ Y F
Sbjct: 165 PNTEYYASHFPKIEEKNYQYAIYLSF 190
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 342 AYNILGKPGTRAQYDSITEVSTGPNSYVYKT 434
AY + +PG+ Q+D + + PN+ +Y+T
Sbjct: 357 AYGMSRRPGSPRQFDQQQRLYSQPNAMMYQT 387
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 7/78 (8%)
Frame = +3
Query: 354 LGKPGTRAQYDSITEVSTGPNSYVYKTHVPYNLRKNAQYSYYYDFGSKAHSAKGNTN--- 524
L PG + + + N+ VY +P N+ SY+ FG ++ N +
Sbjct: 155 LSSPGFYGTPQPLNQFTDPNNTAVYVHQLPENITTQELRSYFLHFGEILYTQVNNNSGRI 214
Query: 525 ----TYYSNESAKKMPNY 566
Y++ ++ +M N+
Sbjct: 215 VFAQRYFAEQAINEMNNF 232
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 366 LVCQEYYTLQQSGQISLVLLHLYSCLDDILYLTE 265
L+ E + L Q +SL L+HL S +D+I +T+
Sbjct: 1069 LLKSELFQLDQCYSLSLYLIHLKSEVDEIGKVTD 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,110,443
Number of Sequences: 5004
Number of extensions: 67565
Number of successful extensions: 242
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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