Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2j01
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 32 0.37
09_04_0180 + 15367737-15367755,15368874-15369739 30 1.5
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 30 2.0
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724... 29 2.6
06_03_1498 + 30589634-30589750,30590441-30590577,30590797-30591514 29 2.6
02_01_0740 - 5511434-5511547,5511952-5512023,5512106-5512300,551... 29 3.4
11_06_0610 - 25449085-25453284 29 4.5
04_04_1157 - 31333870-31334220,31334440-31334590,31334678-313349... 29 4.5
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 29 4.5
07_01_0836 - 6795224-6795263,6796027-6796128,6796264-6796401,679... 28 6.0
06_03_1154 - 28057329-28057728,28058141-28058184,28058269-280584... 28 6.0
05_03_0458 + 14280953-14281866,14281964-14282912 28 6.0
04_03_0904 + 20717005-20718087 28 6.0
02_01_0422 - 3084940-3087072 28 6.0
01_06_0746 - 31636024-31641396 28 6.0
12_01_0981 + 9931542-9931606,9931779-9933105 28 7.9
07_01_0281 - 2067696-2068862 28 7.9
06_03_1248 + 28685911-28687719 28 7.9
06_03_0559 + 22148773-22149210,22149478-22149684,22150065-221504... 28 7.9
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 392 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSS 571
PT + ++ + P+P S+ Y +STI+ T VN Q L PS H VP+ +
Sbjct: 495 PTHNGTASTSHSAGPQPSSAPYASSTIT--THRVNCQSL--PSQQHGSVPQVSAERGEHG 550
Query: 572 SSIENAYYECLNNLDSNPGNRH 637
+ ++ + NNL P +H
Sbjct: 551 AEVKGNH----NNLHERPAIQH 568
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +2
Query: 272 SSLGAILDTAFTSSADN--QQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPV 445
++L LD A + D + E +E D L D +E LP D P+P
Sbjct: 14 AALDPTLDPALEPANDPALEPELEPVEDDVLELAEDPALEPLPDLD----------PEPE 63
Query: 446 SSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIENAYYECLNNLDSNP 625
+ + + ++ + P+ P+ + P P E P P + + E + LD P
Sbjct: 64 VEAELEAELE---LELLVPPIPTPAPSPIPRPPELDPEPKAETDPEA---DPKPGLDPEP 117
Query: 626 GNRHMPDVNIRYQPKPP 676
PD+ + +P PP
Sbjct: 118 DTNVEPDLELEPEPPPP 134
>01_01_0548 -
4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 522 QHILQCLKNINLYLIVPAQLKT 587
Q + C KNIN Y+ VPA+LK+
Sbjct: 847 QPLSMCFKNINYYVDVPAELKS 868
>09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,
7246502-7246522
Length = 1012
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Frame = +2
Query: 422 NEQVPKPVSS-NYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIENAYYE 598
N+ +PV S N + I NP ++ P SS PV P P S+S ++
Sbjct: 837 NQPGKEPVDSLNKESGFIRNPHGHSSMMP---HSSGSIPVQNSLPPAPPSASQLQVHAPP 893
Query: 599 CLNNLDSNPGNRHMPDVNI---RYQPKPPM 679
++ NP H P+ + P PPM
Sbjct: 894 VQGSVPPNPSIMHTPNAPMPSHNTLPLPPM 923
>06_03_1498 + 30589634-30589750,30590441-30590577,30590797-30591514
Length = 323
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/89 (23%), Positives = 41/89 (46%)
Frame = +2
Query: 215 TEKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLP 394
T++ E +++ + +S I TA + +R +++E D + +D + +V
Sbjct: 168 TDRSRNSEDTSNGFSATNGASGAKINGTAKAKQDGSIRRRQKVEADQVSNTTDTQDDVF- 226
Query: 395 TSDIASNILNEQVPKPVSSNYVNSTISNP 481
T I + +P+P+SS N SNP
Sbjct: 227 TDPI--KMTKSLLPRPISSIRQNMDTSNP 253
>02_01_0740 -
5511434-5511547,5511952-5512023,5512106-5512300,
5512408-5512611,5512690-5512848,5513144-5513249,
5513387-5513554,5513644-5513834,5514410-5514634,
5514818-5514935,5515023-5515195,5515280-5515327,
5515484-5515589,5515697-5515802,5516211-5516332,
5516661-5516741,5516844-5516934,5517036-5517132,
5517287-5517919
Length = 1002
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 218 EKGFEGEQSTSSWDVPGPSSLGAILDT 298
E G EGE+S +SW VP G DT
Sbjct: 104 EDGEEGEESVASWGVPDDCYYGNFSDT 130
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +2
Query: 434 PKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIE 583
P P + S + + P+ S P PEEY P P SS E
Sbjct: 728 PPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPTPEEYTPSPPKSSPPE 777
>04_04_1157 -
31333870-31334220,31334440-31334590,31334678-31334909,
31335001-31335211,31335517-31335635,31335720-31335953,
31336000-31336201,31336297-31336676,31336792-31336856,
31337362-31337427,31337883-31337957,31338233-31338304,
31338994-31339062,31339150-31339221,31339325-31339396,
31339791-31339862,31339947-31340018,31340474-31340545,
31340645-31340828,31341474-31341588
Length = 961
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 233 GEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAES 370
G+Q+ SSW++ G G D S+ D+ N + CD F S
Sbjct: 50 GQQAQSSWNLSGDPCTGRATD---GSAIDDTSFNPAITCDCTFQNS 92
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 410 MQYQMWVAPPLHHHSQQTKHHTPFLHFSVDCQH 312
+Q M VAP HH QQ HH P L + QH
Sbjct: 692 LQTGMMVAPT-HHREQQKHHHHPHLQPHGEEQH 723
>07_01_0836 -
6795224-6795263,6796027-6796128,6796264-6796401,
6796790-6796932,6797388-6797607,6798087-6798208,
6798317-6798544,6798993-6799355
Length = 451
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 486 LMLTYNHSQNLHQHILQCLKNINL 557
L++T NH N+H+ +++ LKN+N+
Sbjct: 396 LIMTTNHV-NIHEQVIESLKNLNM 418
>06_03_1154 -
28057329-28057728,28058141-28058184,28058269-28058445,
28060193-28060276,28060411-28060521
Length = 271
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 560 PDSSSSIENAYYECLNNLDSNPGNRHMPDVNIRYQPKPPM 679
PD I +YY L+N +N M N +QP PP+
Sbjct: 141 PDLIGRIPMSYYSTLSNSATNIWFGGMVATNATFQPTPPL 180
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 392 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVP--EEYQPLP 562
PTS +S P P SSN ++ + PT +L S PSS+ + P QP P
Sbjct: 19 PTSPPSS--CRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQPTP 75
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 434 PKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLP 562
P P +Y NP QP P + P P Y+P P
Sbjct: 211 PTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQP 253
>02_01_0422 - 3084940-3087072
Length = 710
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 471 SQIQHLMLTYNHSQNLHQ--HILQCLKNINLYLI 566
+ I L L+YN+ N+ HIL+ L+N+N+ LI
Sbjct: 386 NSITFLSLSYNNFTNIKNTLHILKSLRNLNVLLI 419
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 449 MILVWAPVR*VYLMQYQMWVA 387
+I++W PV +YLM Q+W A
Sbjct: 551 VIILWLPVIIIYLMDIQIWYA 571
>12_01_0981 + 9931542-9931606,9931779-9933105
Length = 463
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 440 PVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPL 559
P N++ +T N + N + P H P P +Y PL
Sbjct: 49 PPPPNHIPTTERNTSVFFNTSTIPPPPPPHFPQPPQYTPL 88
>07_01_0281 - 2067696-2068862
Length = 388
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2
Query: 464 STISNPTFDVNLQPLSEPSSAHTPVP-EEYQPLPDSSSSIENAYYE---CLNNLDSNPGN 631
+ ++ ++DVN PL E +A P P + P P + +A + +N D +P
Sbjct: 131 AALAKRSYDVNFPPLHEHRAAPFPAPAPAFAPAPAGTMGSSSAQVQGDGAPDNHDHDP-- 188
Query: 632 RHMP 643
RH+P
Sbjct: 189 RHLP 192
>06_03_1248 + 28685911-28687719
Length = 602
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/124 (18%), Positives = 44/124 (35%)
Frame = +2
Query: 218 EKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPT 397
+K STS W P L AFT + ++ R + + +A +
Sbjct: 123 DKAKAAAASTSRWSAVSPRQLMQKASNAFTRGSSSKSRAAKKDKEAATPAATSAAAKDAA 182
Query: 398 SDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSS 577
+ +++ + ++ P +S + QP E T P +P P +++
Sbjct: 183 TPASTSAVRKKAATPATSAAGKAVAGASPGPTRAQPTEEHHQQPTEAPPA-EPSPAAAAV 241
Query: 578 IENA 589
E A
Sbjct: 242 QEEA 245
>06_03_0559 +
22148773-22149210,22149478-22149684,22150065-22150471,
22150655-22151472,22151564-22151674,22151846-22152015
Length = 716
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 365 ESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNP 481
E +DE E PT S+ +++ +P+SSN +ST+S+P
Sbjct: 222 EEEDEEEFQPTPISTSSQRSQKGKRPLSSN--SSTLSSP 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,991,916
Number of Sequences: 37544
Number of extensions: 373151
Number of successful extensions: 1339
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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