Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2i14
         (755 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IBZ0 Cluster: Putative uncharacterized protein MAL7P1...    37   0.47 
UniRef50_A1XIP9 Cluster: Polyprotein; n=3; ssRNA positive-strand...    34   4.4  
UniRef50_Q231C7 Cluster: TPR Domain containing protein; n=1; Tet...    34   4.4  
UniRef50_Q8JS31 Cluster: Putative uncharacterized protein PhopGV...    33   5.8  
UniRef50_A6LQ52 Cluster: Methyl-accepting chemotaxis sensory tra...    33   5.8  
UniRef50_A6PA44 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_A6M0H8 Cluster: rRNA (Guanine-N(1)-)-methyltransferase;...    33   7.6  
UniRef50_Q23J57 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_Q22TR9 Cluster: Putative uncharacterized protein; n=2; ...    33   7.6  

>UniRef50_Q8IBZ0 Cluster: Putative uncharacterized protein MAL7P1.30;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            MAL7P1.30 - Plasmodium falciparum (isolate 3D7)
          Length = 3267

 Score = 37.1 bits (82), Expect = 0.47
 Identities = 22/83 (26%), Positives = 44/83 (53%)
 Frame = -2

Query: 733  NHK*IWRNVITKIIITLVSLLKN*MFFFFDLLYVFVNSNKNCFSVF*ILFLWFNRYVCYV 554
            N K   +N+   I+ +  +++    FF ++ LY F+N  K    ++  + +W N +  +V
Sbjct: 2586 NKKRFIKNIHNNIVKSKNNIIIKKCFFMWNRLYNFLNKKKRNI-MYTYIHIW-NIHYTFV 2643

Query: 553  GFIYDIRNFMFSPVYINI*SYYF 485
            GFI  I  ++++    NI S+Y+
Sbjct: 2644 GFIKKINIYLYNIYQNNIFSFYY 2666


>UniRef50_A1XIP9 Cluster: Polyprotein; n=3; ssRNA positive-strand
            viruses, no DNA stage|Rep: Polyprotein - Tomato torrado
            virus
          Length = 2158

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 567  YRLNQRNKIQNTLKQFLFELTNTYNKSKKKNIQF-FKSETNVIIIFVMTFLH 719
            + LN  N   N     LF+LT  YN+S KK++   + + +++++ +V+   H
Sbjct: 2078 FSLNPNNINMNACDAILFQLTECYNRSTKKHVFCRYTTASSLVVAYVLAHRH 2129


>UniRef50_Q231C7 Cluster: TPR Domain containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: TPR Domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1662

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 23   LGDDKKMI*YQQQCIYIAKHSYYTATKDVLNK--QKLSFSYHFLAISKMSTKYHKNCTK 193
            LGD+KK + Y  +C+ I K  Y       + K  QK+   Y  L  +K+  KY +  T+
Sbjct: 1601 LGDNKKALDYMLECLQIQKQIYKNNNHPSIFKSLQKICQYYQILGDAKLYEKYQQEITQ 1659


>UniRef50_Q8JS31 Cluster: Putative uncharacterized protein
           PhopGV028; n=1; Phthorimaea operculella
           granulovirus|Rep: Putative uncharacterized protein
           PhopGV028 - Phthorimaea operculella granulovirus
          Length = 536

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +3

Query: 600 TLKQFLFELTNTYNKSKKKNIQFFKSET 683
           TLKQ L ELTN Y K+KK+  ++FK  +
Sbjct: 508 TLKQLLNELTNKYTKAKKQLDKYFKKSS 535


>UniRef50_A6LQ52 Cluster: Methyl-accepting chemotaxis sensory
           transducer precursor; n=1; Clostridium beijerinckii
           NCIMB 8052|Rep: Methyl-accepting chemotaxis sensory
           transducer precursor - Clostridium beijerinckii NCIMB
           8052
          Length = 825

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
 Frame = +2

Query: 143 FLAISKMSTKYHKNCTKDPN-----ELEDPTRKQPDEQLT---RKLKPLTTKPLCDCSNC 298
           F+A+S +  ++     K+ N     E+      + D+Q+    R L+ + + P+    N 
Sbjct: 24  FIALSGIGYRFASKSLKESNLNVMEEMTKTAASRADDQIKSEIRNLEVIASNPIITDKNV 83

Query: 299 TCKDCPDVLKTFSINVTEDSCDFGTKKVEQIDESSHEVSIKDCQSLLDVLNNTRNCTCEI 478
             ++   +LK     V +       K    ID   ++ SIK  QS +  +N   + T   
Sbjct: 84  QIEEKIQILKPALKTVGQLEMSISDKDGNSIDTLGNKKSIKTTQSFMKSINGENSITNPY 143

Query: 479 IAKVVRSNV 505
           I  V +  V
Sbjct: 144 IDPVTKKKV 152


>UniRef50_A6PA44 Cluster: Putative uncharacterized protein; n=1;
           Shewanella sediminis HAW-EB3|Rep: Putative
           uncharacterized protein - Shewanella sediminis HAW-EB3
          Length = 414

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query: 110 LNKQKLSFSYHFLAISKMSTKYHKNCTKDPNELEDPTRK-QPDEQLTRKLKPLTTKPLCD 286
           L  +  S S     + +   ++ +   +    + D T+K +  EQ TR L+    + L  
Sbjct: 234 LRNELASTSSSVEILDRQKVQWQQKLRQSEENILDLTQKLRQREQETRALEGFVKQSLSP 293

Query: 287 CSNCT---CKDCPDV 322
           C+ C+   C+DCPD+
Sbjct: 294 CNGCSADSCRDCPDL 308


>UniRef50_A6M0H8 Cluster: rRNA (Guanine-N(1)-)-methyltransferase;
           n=1; Clostridium beijerinckii NCIMB 8052|Rep: rRNA
           (Guanine-N(1)-)-methyltransferase - Clostridium
           beijerinckii NCIMB 8052
          Length = 286

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 86  YYTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKD 196
           Y T  KD +NK+ +  +Y+ L +SK + KY     KD
Sbjct: 111 YLTNLKDYMNKKNIEANYYGLDVSKEAVKYASKLNKD 147


>UniRef50_Q23J57 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 992

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
 Frame = +2

Query: 320 VLKTFSINVTED-SCDFGT----KKVEQIDESS--HEVSIKDCQSLLDVLNNTRNCTC 472
           +L++ S+NVT + + DFGT    +K++ I  SS  H V    CQ+ ++V+NN +N  C
Sbjct: 528 LLQSQSVNVTSNFTLDFGTISPEEKLQCIQRSSSGHWVH-SSCQTHIEVINNKKNIKC 584


>UniRef50_Q22TR9 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1349

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = +2

Query: 77  KHSYYTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKDPNELEDPTRKQPDEQLTRKL 256
           K +     K+  N  K+S     L + K++ + H  C K PN+  +    Q ++ LT+  
Sbjct: 43  KENQINYLKNNQNTLKISLPTQILQMDKITIQ-HLKCNKHPNK--NLQFIQVNDVLTQ-- 97

Query: 257 KPLTTKPLCDCSNC 298
            P++TKPL  CS+C
Sbjct: 98  -PISTKPLFYCSSC 110


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,792,753
Number of Sequences: 1657284
Number of extensions: 12296156
Number of successful extensions: 37711
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37670
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)