Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2i13
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    50   2e-06
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    50   2e-06
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    37   0.018
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        37   0.018
Z81120-4|CAB03346.1|  142|Caenorhabditis elegans Hypothetical pr...    35   0.054
Z70267-5|CAA94209.2|  143|Caenorhabditis elegans Hypothetical pr...    33   0.16 
U00050-10|AAA50701.1|  153|Caenorhabditis elegans Myosin light c...    32   0.50 
L03412-1|AAA28112.1|  153|Caenorhabditis elegans alkali myosin l...    32   0.50 
AL110490-6|CAB54442.2|  687|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical...    29   2.7  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin rela...    29   3.5  
AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical ...    28   6.2  
AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical...    28   6.2  

>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 39/153 (25%), Positives = 70/153 (45%)
 Frame = +3

Query: 249 SNEDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTV 428
           + E I  FKE F   D++    I  + +  ++R LG NP  AE++ +  + ++ +   T+
Sbjct: 6   TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE-VDADGNGTI 64

Query: 429 ELHEWFFMIEAKMNWGDDFELAVTKAFACLGHDDEETGTVDFLALKEELMTWGEPLSELE 608
           +  E+  M+  KM    D E  + +AF     D +  G +    L+  +   GE L++ E
Sbjct: 65  DFPEFLTMMARKMK-DTDSEEEIREAFRVF--DKDGNGFISAAELRHVMTNLGEKLTDEE 121

Query: 609 FMDWTKLAMKDKTYNPEDGMFSYVKFIENMNNK 707
             +  + A  D      DG  +Y +F+  M  K
Sbjct: 122 VDEMIREADID-----GDGQVNYEEFVTMMTTK 149


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 39/153 (25%), Positives = 70/153 (45%)
 Frame = +3

Query: 249 SNEDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTV 428
           + E I  FKE F   D++    I  + +  ++R LG NP  AE++ +  + ++ +   T+
Sbjct: 6   TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINE-VDADGNGTI 64

Query: 429 ELHEWFFMIEAKMNWGDDFELAVTKAFACLGHDDEETGTVDFLALKEELMTWGEPLSELE 608
           +  E+  M+  KM    D E  + +AF     D +  G +    L+  +   GE L++ E
Sbjct: 65  DFPEFLTMMARKMK-DTDSEEEIREAFRVF--DKDGNGFISAAELRHVMTNLGEKLTDEE 121

Query: 609 FMDWTKLAMKDKTYNPEDGMFSYVKFIENMNNK 707
             +  + A  D      DG  +Y +F+  M  K
Sbjct: 122 VDEMIREADID-----GDGQVNYEEFVTMMTTK 149


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 36/151 (23%), Positives = 67/151 (44%)
 Frame = +3

Query: 255 EDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTVEL 434
           E+I  F+E F   D++    I  + + + +R LG NP   EI  +  + ++ +    +E 
Sbjct: 78  EEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINE-VDIDGNGQIEF 136

Query: 435 HEWFFMIEAKMNWGDDFELAVTKAFACLGHDDEETGTVDFLALKEELMTWGEPLSELEFM 614
            E+  M++  M    D E+ + +AF     D +  G +     +  ++  G   SE E  
Sbjct: 137 PEFCVMMKRMMK-ETDSEM-IREAFRVF--DKDGNGVITAQEFRYFMVHMGMQFSEEEVD 192

Query: 615 DWTKLAMKDKTYNPEDGMFSYVKFIENMNNK 707
           +  K    D      DG   Y +F++ M+N+
Sbjct: 193 EMIKEVDVD-----GDGEIDYEEFVKMMSNQ 218


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 36/151 (23%), Positives = 67/151 (44%)
 Frame = +3

Query: 255 EDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTVEL 434
           E+I  F+E F   D++    I  + + + +R LG NP   EI  +  + ++ +    +E 
Sbjct: 21  EEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINE-VDIDGNGQIEF 79

Query: 435 HEWFFMIEAKMNWGDDFELAVTKAFACLGHDDEETGTVDFLALKEELMTWGEPLSELEFM 614
            E+  M++  M    D E+ + +AF     D +  G +     +  ++  G   SE E  
Sbjct: 80  PEFCVMMKRMMK-ETDSEM-IREAFRVF--DKDGNGVITAQEFRYFMVHMGMQFSEEEVD 135

Query: 615 DWTKLAMKDKTYNPEDGMFSYVKFIENMNNK 707
           +  K    D      DG   Y +F++ M+N+
Sbjct: 136 EMIKEVDVD-----GDGEIDYEEFVKMMSNQ 161


>Z81120-4|CAB03346.1|  142|Caenorhabditis elegans Hypothetical
           protein T12D8.6 protein.
          Length = 142

 Score = 35.1 bits (77), Expect = 0.054
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
 Frame = +3

Query: 255 EDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTVEL 434
           +D+   +E+F   D +  ++I ++ +  +LR LG NP  AEI      F  +  +   + 
Sbjct: 2   DDLADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDF 61

Query: 435 HEWFFMIEAKMNWGDDFELAVTKAFACLGHDDEE-TGTVDFLALKEELMTWGEPLSE 602
              F  +          +  V +    L H D+E  G ++   L+  L T GE LS+
Sbjct: 62  VPIFQSVSKNRE-----KHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSD 113


>Z70267-5|CAA94209.2|  143|Caenorhabditis elegans Hypothetical
           protein K04C1.4 protein.
          Length = 143

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
 Frame = +3

Query: 273 KEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTVELHEWFFM 452
           +E+F   D++   KI    +  +LR L  NPK +++    A+F +   +      E F  
Sbjct: 11  REVFMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDVHQCLAKFDKTARIS----FENFLP 66

Query: 453 IEAKMNWGDDFELAVTKAFACLGHDDEE-TGTVDFLALKEELMTWGEPLSELEF 611
           + + +   +    ++      L H D+E  G +    L++ L T G+ LS+ EF
Sbjct: 67  VLSHVR-NNKIPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEF 119


>U00050-10|AAA50701.1|  153|Caenorhabditis elegans Myosin light
           chain protein 3, isoforma protein.
          Length = 153

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 38/149 (25%), Positives = 60/149 (40%)
 Frame = +3

Query: 252 NEDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTVE 431
           ++D++  KE+F  +DEE   KI    +  + R  G  P  A +     Q  + +    + 
Sbjct: 5   SQDVL--KEIFNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLT 62

Query: 432 LHEWFFMIEAKMNWGDDFELAVTKAFACLGHDDEETGTVDFLALKEELMTWGEPLSELEF 611
             EW  M E      +    A          D EETG +    L+  L+  GE LS  E 
Sbjct: 63  FEEWLPMYEQLAKEKEQGTYADFYE-GLKVFDKEETGKILAAELRHILLALGERLSADEA 121

Query: 612 MDWTKLAMKDKTYNPEDGMFSYVKFIENM 698
            +  K  ++D      +GM  Y  FI+ +
Sbjct: 122 DELLK-GVED-----GEGMVKYEDFIKKV 144


>L03412-1|AAA28112.1|  153|Caenorhabditis elegans alkali myosin
           light chain protein.
          Length = 153

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 38/149 (25%), Positives = 60/149 (40%)
 Frame = +3

Query: 252 NEDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDEYVDTVE 431
           ++D++  KE+F  +DEE   KI    +  + R  G  P  A +     Q  + +    + 
Sbjct: 5   SQDVL--KEIFNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLT 62

Query: 432 LHEWFFMIEAKMNWGDDFELAVTKAFACLGHDDEETGTVDFLALKEELMTWGEPLSELEF 611
             EW  M E      +    A          D EETG +    L+  L+  GE LS  E 
Sbjct: 63  FEEWLPMYEQLAKEKEQGTYADFYE-GLKVFDKEETGKILAAELRHILLALGERLSADEA 121

Query: 612 MDWTKLAMKDKTYNPEDGMFSYVKFIENM 698
            +  K  ++D      +GM  Y  FI+ +
Sbjct: 122 DELLK-GVED-----GEGMVKYEDFIKKV 144


>AL110490-6|CAB54442.2|  687|Caenorhabditis elegans Hypothetical
           protein Y48B6A.6a protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 246 FSNEDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNPKGAEIRTLFAQFLEDE 413
           FS + I  F  +FK +DE+    I    +  M+ KLG       ++ L  +  ED+
Sbjct: 538 FSRKQIQYFSGIFKKYDEDQDSYIDFNELKRMMEKLGEAQTHIALKELIKKVDEDQ 593


>AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.17 protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = +3

Query: 243 CFSNEDIMRFKEMFKAHDEENIDKIPLEAIPL-MLRKL--GFNPKGAEIRTLFAQFLEDE 413
           C++N+++    + +KA    ++ K+    + L  +  +   FN +G E  T+   +L+D+
Sbjct: 143 CYTNKNLKLLLKTWKAKKWNHVKKLEFSRVHLDFILSIFPHFNSQGLESITMRNIYLDDQ 202

Query: 414 YVDTVELHEW 443
           +    +L +W
Sbjct: 203 FEQITQLDQW 212


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 588  PPMSLVLLSELENQQYLFLHHHDPNKQML**QQARNRHP 472
            PP   ++ ++   Q  + +H+H+  K+ML  QQ RN HP
Sbjct: 1327 PPGQFMMRAQPPQQPQINMHNHEIAKRML-MQQFRNAHP 1364


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 588  PPMSLVLLSELENQQYLFLHHHDPNKQML**QQARNRHP 472
            PP   ++ ++   Q  + +H+H+  K+ML  QQ RN HP
Sbjct: 1327 PPGQFMMRAQPPQQPQINMHNHEIAKRML-MQQFRNAHP 1364


>U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin related
           genes protein 3 protein.
          Length = 164

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 249 SNEDIMRFKEMFKAHDEENIDKIPLEAIPLMLRKLGFNP 365
           + E+I  FKE F   D++    I ++ + + +R LG NP
Sbjct: 24  TEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNP 62


>AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical
           protein Y45F10B.14 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 727 SLTYLTSLLFIFSINFTYENIPSSGLYVLSFIASFVQS 614
           +LTY   L  ++SIN     +  SG+Y   F  +F+ S
Sbjct: 234 ALTYQALLPTLYSINVVMYVLEQSGIYASPFFENFIMS 271


>AC087081-16|AAG37970.1|  252|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.3 protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 506 CFSNSKLEIVTPIHFGFNHEKPFVQFNRINVFIF 405
           CF+N  LE  +PI + F          ++++FIF
Sbjct: 121 CFANVLLESESPIKYTFPKTTKLTNLQKVSIFIF 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,461,184
Number of Sequences: 27780
Number of extensions: 276502
Number of successful extensions: 705
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)