Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2i12
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 32 0.26
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 32 0.26
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 32 0.26
AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like ... 32 0.26
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 29 1.8
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 29 1.8
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 29 1.8
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 29 1.8
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 29 1.8
Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical p... 29 1.8
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 29 1.8
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 29 1.8
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 29 1.8
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 29 1.8
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 29 1.8
U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z30215-4|CAA82936.1| 541|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical pr... 28 5.6
U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF026206-1|AAK39306.1| 260|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical p... 27 7.4
U40948-3|AAA81729.1| 307|Caenorhabditis elegans Hypothetical pr... 27 7.4
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform c protein.
Length = 1576
Score = 32.3 bits (70), Expect = 0.26
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +3
Query: 129 DSCACSDQKNQEDRHR*TNSKMTKNVAKIDVKSCVKAEPPHPCDPIVPCDPLKQEEGECP 308
DS + K++ + R +S M + VA + ++ V+ P+ C P PCD + E E
Sbjct: 1160 DSLSAKSGKSEAELDR-EHSLMGQWVALTEERTAVECPTPNSCIPGAPCDWIAPEGVERH 1218
Query: 309 TPSLCVEKLKNPAHAGEIT 365
P L ++ L + GE+T
Sbjct: 1219 IPVLFLD-LNSDDMTGEMT 1236
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform b protein.
Length = 1610
Score = 32.3 bits (70), Expect = 0.26
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +3
Query: 129 DSCACSDQKNQEDRHR*TNSKMTKNVAKIDVKSCVKAEPPHPCDPIVPCDPLKQEEGECP 308
DS + K++ + R +S M + VA + ++ V+ P+ C P PCD + E E
Sbjct: 1160 DSLSAKSGKSEAELDR-EHSLMGQWVALTEERTAVECPTPNSCIPGAPCDWIAPEGVERH 1218
Query: 309 TPSLCVEKLKNPAHAGEIT 365
P L ++ L + GE+T
Sbjct: 1219 IPVLFLD-LNSDDMTGEMT 1236
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform a protein.
Length = 1595
Score = 32.3 bits (70), Expect = 0.26
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +3
Query: 129 DSCACSDQKNQEDRHR*TNSKMTKNVAKIDVKSCVKAEPPHPCDPIVPCDPLKQEEGECP 308
DS + K++ + R +S M + VA + ++ V+ P+ C P PCD + E E
Sbjct: 1160 DSLSAKSGKSEAELDR-EHSLMGQWVALTEERTAVECPTPNSCIPGAPCDWIAPEGVERH 1218
Query: 309 TPSLCVEKLKNPAHAGEIT 365
P L ++ L + GE+T
Sbjct: 1219 IPVLFLD-LNSDDMTGEMT 1236
>AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like
protein KLP-4 protein.
Length = 793
Score = 32.3 bits (70), Expect = 0.26
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +3
Query: 129 DSCACSDQKNQEDRHR*TNSKMTKNVAKIDVKSCVKAEPPHPCDPIVPCDPLKQEEGECP 308
DS + K++ + R +S M + VA + ++ V+ P+ C P PCD + E E
Sbjct: 580 DSLSAKSGKSEAELDR-EHSLMGQWVALTEERTAVECPTPNSCIPGAPCDWIAPEGVERH 638
Query: 309 TPSLCVEKLKNPAHAGEIT 365
P L ++ L + GE+T
Sbjct: 639 IPVLFLD-LNSDDMTGEMT 656
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -3
Query: 182 CSSVSVFLIFLVRTSAGVVVPVFRHQRLPILEFLDCNWTQARLTLV 45
CS +S+ + LV A ++ + HQR+ I F + WT+ +T+V
Sbjct: 145 CSGLSIAGV-LVCICAWILESILSHQRMVIRAFFNWGWTRVFITVV 189
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 181 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 240
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 241 TGFPGRCCDKWECVDAELSKAK 262
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 181 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 240
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 241 TGFPGRCCDKWECVDAELSKAK 262
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>Z70307-14|CAA94338.2| 409|Caenorhabditis elegans Hypothetical
protein C39E9.12 protein.
Length = 409
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = +3
Query: 180 TNSKMTKNVAK--IDVKSCVKAEPPHPC 257
T++K TK+VA+ +DVK K++ P PC
Sbjct: 282 TSTKKTKSVARSHVDVKKLTKSQIPKPC 309
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 389 QRYFLRQRGSTTSLRRARLQYGPYKEAPLFGPS 487
QR FL RG+ R Y YK+ PLF S
Sbjct: 646 QRAFLSPRGAIQEFALGRFLYSLYKDTPLFDTS 678
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 389 QRYFLRQRGSTTSLRRARLQYGPYKEAPLFGPS 487
QR FL RG+ R Y YK+ PLF S
Sbjct: 646 QRAFLSPRGAIQEFALGRFLYSLYKDTPLFDTS 678
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Frame = +3
Query: 267 VPCDPLKQEEGECPTPSL----------CVEKLKNPAHAGEI---TKCLPGKFINVTSCA 407
V C P+ Q+E ECP S+ C ++ G I +C GK +NVT
Sbjct: 115 VHCPPMFQDEEECPPDSIRPPESISKESCCPIRQSCKCRGSICRPAQCPDGKVVNVTKKG 174
Query: 408 KEDPPHPCDALAC-NTDLTKRR 470
P CD C + +L+K +
Sbjct: 175 TGFPGRCCDKWECVDAELSKAK 196
>U41994-7|AAY55868.1| 155|Caenorhabditis elegans Hypothetical
protein F59A6.10 protein.
Length = 155
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +3
Query: 369 CLPGKFINVTSCAKEDPPHPCDA-LAC---NTDLTKRRPCSDPPLCVQRIKNPVTEK-EK 533
C PG F + PP C LAC + R CS P +CV+R++ + ++
Sbjct: 28 CPPGTFCDERPGPCVKPP--CRTILACLPVEANGCARMECSAPKVCVERVRPCIGRSCKE 85
Query: 534 VDSCDTP 554
+ +C+TP
Sbjct: 86 IATCETP 92
>Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical
protein F40E10.5 protein.
Length = 284
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 231 VKAEPPHPCDPIVPCDPLKQEEGECPTPSLCVEKLKNPAHAGEITKCLPGKFINVTSCAK 410
V A PP DP P P + C P + +L + A A +ITK + K++ +C K
Sbjct: 14 VLAFPPRHSDPFNPLGPWHKRTKPCGIPKF-INELPSEA-AEKITK-IWEKYVEGNTCEK 70
Query: 411 E 413
E
Sbjct: 71 E 71
>Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical
protein R07B1.9 protein.
Length = 770
Score = 28.7 bits (61), Expect = 3.2
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = -3
Query: 284 QRITGYNRVTRVRRFGFHTRFDVDFCNVFSHFAVCSSVSVFLIFLVRTSAGVVVPVFRHQ 105
Q G+N + + R + + S AV S S+F IFL+ V +PV+ Q
Sbjct: 109 QSADGFNEEFQSENSNYAGRIVISALMIASG-AVASLFSLFAIFLLSKIIVVTIPVYPLQ 167
Query: 104 -RLPILEFLDCNWTQARLTLV--LLSFTILGARIII 6
R L T A + L+ +L+F ILG + I
Sbjct: 168 SREQELAMSSAKKTLASIGLIKFILAFGILGLCVFI 203
>Z30215-4|CAA82936.1| 541|Caenorhabditis elegans Hypothetical
protein F40F12.4 protein.
Length = 541
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 318 LCVEKLKNPAHAGEITKCLPGKFINVTSCAKEDPPHPCDALACNTDLTKRRPCSD 482
+ ++K+K A T + KFIN+ S + C+A+ C+ + T+ PCS+
Sbjct: 340 IILKKIKLRQPASHETNEINDKFINMASSSDSSISTICEAIVCSFNETE--PCSN 392
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 378 GKFINVTSCAKEDPPHPCDALACNTDL 458
G F+ +T+ E+ P PCD ++ TDL
Sbjct: 9 GSFLQLTNYFAENYPAPCDLISSLTDL 35
>Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical
protein F43C1.5 protein.
Length = 221
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 105 LMPEDRNHDSCACSDQKNQEDRHR*TNSKMTKNVAKIDVKSCVKAEPPHPCD 260
L+ E++ SC+ S + RH K +KN +KI V K EP D
Sbjct: 128 LISEEKKKKSCSDSSSIQESRRHVKIPGKNSKN-SKISVNKAKKLEPRRRSD 178
>U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical
protein C52E12.6 protein.
Length = 346
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 444 CNTDLTKRRPCSD-PPLCVQRIKNPVTEKEKV 536
C+ DL KR P SD PP +R K V E E +
Sbjct: 295 CDEDLVKREPISDSPPSSAKRRKIYVPEFEAI 326
>AF026206-1|AAK39306.1| 260|Caenorhabditis elegans Hypothetical
protein T28B4.2 protein.
Length = 260
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -2
Query: 192 FCCLFIGVCLLDFSGQNKRRSRGSGLQASEASHLGVSGL*LDPGTVDTCSFEFYNFGCKN 13
FC ++ L + R +G GLQ E H G + L V + F+N C
Sbjct: 16 FCIFYMIFALYKIFNHHLDRRKGRGLQLGEKQHYGGCVVTLGFTIVFLVTDSFFNLFCDV 75
Query: 12 Y 10
Y
Sbjct: 76 Y 76
>Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical
protein C01G10.2 protein.
Length = 343
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = -3
Query: 263 RVTRVRRFGFHTRFDVDFCNVFSHFAVCSSVSVFLIFLVRTSAGVVVPVFRHQRLPI 93
RV+ F F+++++ + N+F H F++ V G ++ +F ++ P+
Sbjct: 253 RVSHWNNFSFNSKYNFNSSNLFDHRIWTFFCQTFVLQFVHVLDGFIMMMFNNRLSPM 309
>Z50070-11|CAD45593.1| 506|Caenorhabditis elegans Hypothetical
protein F43G6.11b protein.
Length = 506
Score = 27.5 bits (58), Expect = 7.4
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = -1
Query: 397 VTLMNFPGRHFVISPACAGFFNFSTHREGVGHSPSSCFKGSQGTIGSHG*GGSAFTQDLT 218
+ L +F G HF F+ FS + +SP++ F GT+ S G S F L
Sbjct: 188 IHLTSFHGHHF------GAFWPFSRDYDYATNSPNTLFVPLNGTMNSEGDYVSVFHHVLL 241
Query: 217 SIFATFLVILLFVHRCLSS*FF 152
++ F L+ + S ++
Sbjct: 242 TMLEQFQPELILISAGFDSGYY 263
>U40948-3|AAA81729.1| 307|Caenorhabditis elegans Hypothetical
protein F55D10.4 protein.
Length = 307
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -3
Query: 185 VCSSVS--VFLIFLVRTSAGVVVPVFRHQRLP 96
VC+S++ V + F + S + VP F+HQ+LP
Sbjct: 46 VCNSITAIVTIFFSLNPSQCLEVPCFQHQQLP 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,109,274
Number of Sequences: 27780
Number of extensions: 363326
Number of successful extensions: 1212
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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