BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2i08
(754 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 26 1.1
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 25 1.9
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 2.5
EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein. 25 3.3
EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein. 25 3.3
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 4.4
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 26.2 bits (55), Expect = 1.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +2
Query: 452 NIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGA 631
++ S+ + E + F N+S VP +PPA + ++ P + +F V
Sbjct: 367 HVKSHTISELSPFTTYFVNVSAVPTDYSYKPPAKITVTTQMAARSPMVQ--PDFYGVVNG 424
Query: 632 VELTHLTPPQSPP-GPATQLLL 694
E+ + P S GP + L
Sbjct: 425 EEIQVILPQASEGYGPISHYYL 446
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 25.4 bits (53), Expect = 1.9
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 419 ITMALADMYLENIFSNWLEEKVDLPSIFENISEVPER 529
+T+A+ M L ++F+ K+D+PS F+ +P+R
Sbjct: 764 VTIAIFSMTLLDVFTRIATPKLDVPSEFKR--TIPDR 798
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 2.5
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +2
Query: 539 QPPAAVLASSPFVTSQPTEELLREFETVYGAV-----ELTHLTPPQSPPGPAT 682
QPP ++ V + PT + ++ T Y H T P PP AT
Sbjct: 243 QPPPPPTTTTTTVWTDPTTTITTDYTTAYPPTTNEPPSTPHPTDPHCPPPGAT 295
>EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein.
Length = 452
Score = 24.6 bits (51), Expect = 3.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 596 ELLREFETVYGAVELTHLTPPQSPPGPATQLLLSYAQ 706
EL + G +EL H T QSP P ++ Y +
Sbjct: 392 ELDGTLQQAVGQIELPHATEEQSPLQPLRAIVKRYEE 428
>EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.6 bits (51), Expect = 3.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 596 ELLREFETVYGAVELTHLTPPQSPPGPATQLLLSYAQ 706
EL + G +EL H T QSP P ++ Y +
Sbjct: 407 ELDGTLQQAVGQIELQHATEEQSPLQPLRAIVKRYEE 443
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 4.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 509 ISEVPERVDPQPPAAVLASSPFVTSQPTE 595
++ P + P PPA ASS V QPTE
Sbjct: 932 VAAAPTQQQPLPPAPAAASSAGV--QPTE 958
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,102
Number of Sequences: 2352
Number of extensions: 15740
Number of successful extensions: 84
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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