Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2i05
         (421 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical ...    63   9e-11
Z99271-1|CAB16471.1|  663|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z19555-3|CAA79616.1|  182|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical
           protein F23C8.5 protein.
          Length = 255

 Score = 62.9 bits (146), Expect = 9e-11
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = -3

Query: 227 ETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQ 69
           E LRTALA GAD+A+HV+V  AE   L+  HVAK L K+ + EK D V +GKQ
Sbjct: 70  EVLRTALAKGADKAVHVQVTDAEAGKLESFHVAKALQKIVEQEKFDAVFLGKQ 122


>Z99271-1|CAB16471.1|  663|Caenorhabditis elegans Hypothetical
           protein Y43F4A.1a protein.
          Length = 663

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -2

Query: 240 FYYKGNSQNCSCD-GCRSSYSC 178
           +YYK   +N +CD GCR   +C
Sbjct: 127 YYYKQGMRNVACDKGCRERTTC 148


>Z19555-3|CAA79616.1|  182|Caenorhabditis elegans Hypothetical
           protein F02A9.2 protein.
          Length = 182

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 164 AEYDTLQPIHVAKILAKLSQDEKADLVIVGKQVTTIKNAYIFL 36
           AEY +L P  V++ L  ++ +EKA L  V K     K+   FL
Sbjct: 32  AEYKSLIPAEVSEHLKSITPEEKAILKEVAKGYKDFKSEDDFL 74


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
           protein K04H4.2c protein.
          Length = 1446

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 246 CLFYYKGNSQNCSCDGCRSSYSC*SG 169
           C F    NS  CS   C + Y C SG
Sbjct: 687 CTFSSCSNSNPCSVGTCNNGYCCSSG 712


>Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical
           protein K04H4.2b protein.
          Length = 788

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 246 CLFYYKGNSQNCSCDGCRSSYSC*SG 169
           C F    NS  CS   C + Y C SG
Sbjct: 173 CTFSSCSNSNPCSVGTCNNGYCCSSG 198


>Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical
           protein K04H4.2a protein.
          Length = 628

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 246 CLFYYKGNSQNCSCDGCRSSYSC*SG 169
           C F    NS  CS   C + Y C SG
Sbjct: 173 CTFSSCSNSNPCSVGTCNNGYCCSSG 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,938,682
Number of Sequences: 27780
Number of extensions: 147748
Number of successful extensions: 345
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)