Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2i03
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1055 - 8419587-8421065                                           30   2.2  
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971...    29   2.9  
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595...    28   8.9  
07_01_0766 - 5885207-5885791,5885874-5886224,5886252-5886269,588...    28   8.9  
03_06_0389 - 33567385-33567969,33568052-33568402,33568646-335688...    28   8.9  
02_05_0801 + 31824548-31825064,31825231-31826171                       28   8.9  

>06_01_1055 - 8419587-8421065
          Length = 492

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
 Frame = -1

Query: 573 LEKVVKPLNNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPL 394
           L +VV+ L   + +     FQ+E   GH+  +    L T   D ++A +  +  P + P 
Sbjct: 293 LSRVVRTLTGAQDSAYRCVFQEEDGEGHRGINLSKDLMTIAGDSLKA-NITAIGPLVLPA 351

Query: 393 DYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMER-VRASIDNWPQRLKECIAANGD 217
              L   L   AR   +  ++      R+A ++F +    RA ID     L+  +  + +
Sbjct: 352 SEQLLFALSFIARRVLNRRVKPYLPDFRMAFEHFCIHAGGRAVID----ELQRSLGLSDE 407

Query: 216 HFE*AFYTLNCF 181
           H E +   L+ F
Sbjct: 408 HVEASRMALHRF 419


>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
            17097266-17097494,17097857-17097981
          Length = 1814

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = -1

Query: 573  LEKVVKPLNNTKFNNQEWSFQ--QESAPGHKA--RSTQSWLETNVSDFIRAEDWPSSSPD 406
            + + VKP+  TK N++   +   +  +P   A  R T S +E +VSD  +A + PSS+  
Sbjct: 1273 IPETVKPMKATKNNSKATDYHGTENKSPDSLACSRQTISQIEKDVSDADKAANHPSSAIT 1332

Query: 405  LNPL 394
             N L
Sbjct: 1333 ENRL 1336


>10_06_0102 + 10758601-10758948,10759051-10759257,10759349-10759507,
            10759617-10759709,10759913-10760008,10760457-10760724,
            10760805-10761047,10761298-10761422,10761499-10761615,
            10761705-10761779,10761886-10761942,10762035-10762139,
            10762244-10762330,10762790-10763047,10763075-10763263,
            10763418-10763528,10763640-10763729,10763814-10763990,
            10764075-10764152,10764412-10764726,10764819-10765162,
            10765304-10765541,10765631-10765998,10766106-10766316,
            10766622-10766801,10766886-10769045,10769151-10769207
          Length = 2251

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 21/77 (27%), Positives = 33/77 (42%)
 Frame = -1

Query: 549  NNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVL 370
            N+ K+NN E  F  +  P +     +      VS ++      + SPD+  L   L  VL
Sbjct: 2175 NSEKWNNDEAFFAWKDDPTNYENQLEELKAERVSKWLSRL---AESPDVKALPNGLSIVL 2231

Query: 369  ESTARSKRHYNLESLKQ 319
                 SKR   ++ L+Q
Sbjct: 2232 NKMNPSKREQVIDGLRQ 2248


>07_01_0766 - 5885207-5885791,5885874-5886224,5886252-5886269,
            5886339-5886541,5886632-5886890,5887052-5887264,
            5887357-5887482,5887590-5887727,5887817-5888162,
            5888254-5888520,5888983-5889172,5889264-5889363,
            5889444-5889694,5889990-5890182,5890313-5890336
          Length = 1087

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +1

Query: 496  WRRLLLEGP-FLIIEL-GVVKGLHYLLKNI*YYIEFAFGQDFFEFCCFDHLFP 648
            W  LL+     LII L GVV G+ Y + +        FG+ FF F    HL+P
Sbjct: 982  WTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYP 1034


>03_06_0389 - 33567385-33567969,33568052-33568402,33568646-33568848,
            33569044-33569299,33569459-33569671,33569757-33569882,
            33569965-33570102,33570191-33570536,33570630-33570896,
            33571192-33571378,33571457-33571556,33571659-33571909,
            33572242-33572428,33572562-33572573
          Length = 1073

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +1

Query: 496  WRRLLLEGP-FLIIEL-GVVKGLHYLLKNI*YYIEFAFGQDFFEFCCFDHLFP 648
            W  LL+     LII L GVV G+ Y + +        FG+ FF F    HL+P
Sbjct: 968  WTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYP 1020


>02_05_0801 + 31824548-31825064,31825231-31826171
          Length = 485

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = -1

Query: 477 TQSWLETNVSDF-----IRAEDWPSSSPDLNPLDYDLWSVLESTARSK 349
           T  +L+T V D      +R +D+PS     NP +Y +  V+E T R K
Sbjct: 178 TNGYLDTPVEDVPGLRNMRIKDFPSFIHTTNPEEYMVGYVIEETERCK 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,305,391
Number of Sequences: 37544
Number of extensions: 334260
Number of successful extensions: 691
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)