Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2i03
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 118 6e-27
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 65 4e-11
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 65 4e-11
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 65 4e-11
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 65 4e-11
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 65 4e-11
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 65 6e-11
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 62 5e-10
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 61 9e-10
U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 34 0.091
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 31 1.1
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 29 2.6
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 29 2.6
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 3.4
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 3.4
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 3.4
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 3.4
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 3.4
Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 29 4.5
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 118 bits (283), Expect = 6e-27
Identities = 51/114 (44%), Positives = 76/114 (66%)
Frame = -1
Query: 582 LYILEKVVKPLNNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDL 403
L +L+ + P F +W+FQQ+ AP HK ++ Q+W E+N DFI WP SSPDL
Sbjct: 285 LDMLKTELMPWVKKHFKKTKWTFQQDGAPAHKHKNVQAWCESNFPDFIAFNQWPPSSPDL 344
Query: 402 NPLDYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLK 241
NP+DY +WSVLE+ A SK H N++SLK S++ A + +RA++D++P+RL+
Sbjct: 345 NPMDYSVWSVLEAKACSKPHRNIDSLKDSLKKAWDELDINYLRATVDSFPRRLE 398
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -1
Query: 279 VRASIDNWPQRLKECIAANGDHFE 208
+RA++D +P+R++ CI A+GD FE
Sbjct: 425 LRATVDAFPKRVRVCIEADGDIFE 448
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 65.3 bits (152), Expect = 4e-11
Identities = 35/99 (35%), Positives = 51/99 (51%)
Frame = -1
Query: 516 FQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVLESTARSKRHYN 337
FQQ++ P H + +SW + + DWPS SPDLNP+++ LW LE R N
Sbjct: 174 FQQDNDPKHTSLHVRSWFQRR---HVHLLDWPSQSPDLNPIEH-LWEELERRLGGIRASN 229
Query: 336 LESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANG 220
++ + A K PM + ID+ P+R + I ANG
Sbjct: 230 ADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 268
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 65.3 bits (152), Expect = 4e-11
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = -1
Query: 576 ILEKVVKP--LNNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDL 403
ILE ++P L N + + FQQ++ P H + +SW + + DWPS SPDL
Sbjct: 225 ILETTMRPWALQNV---GRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDL 278
Query: 402 NPLDYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAAN 223
NP+++ LW LE R N ++ + A K PM + ID+ P+R + I AN
Sbjct: 279 NPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDAN 337
Query: 222 G 220
G
Sbjct: 338 G 338
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 65.3 bits (152), Expect = 4e-11
Identities = 35/99 (35%), Positives = 51/99 (51%)
Frame = -1
Query: 516 FQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVLESTARSKRHYN 337
FQQ++ P H + +SW + + DWPS SPDLNP+++ LW LE R N
Sbjct: 244 FQQDNDPKHTSLHVRSWFQRR---HVHLLDWPSQSPDLNPIEH-LWEKLERRLGGIRASN 299
Query: 336 LESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANG 220
++ + A K PM + ID+ P+R + I ANG
Sbjct: 300 ADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 65.3 bits (152), Expect = 4e-11
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = -1
Query: 576 ILEKVVKP--LNNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDL 403
ILE ++P L N + + FQQ++ P H + +SW + + DWPS SPDL
Sbjct: 155 ILETTMRPWALQNV---GRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDL 208
Query: 402 NPLDYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAAN 223
NP+++ LW LE R N ++ + A K PM + ID+ P+R + I AN
Sbjct: 209 NPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDAN 267
Query: 222 G 220
G
Sbjct: 268 G 268
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 65.3 bits (152), Expect = 4e-11
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = -1
Query: 576 ILEKVVKP--LNNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDL 403
ILE ++P L N + + FQQ++ P H + +SW + + DWPS SPDL
Sbjct: 155 ILETTMRPWALQNV---GRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDL 208
Query: 402 NPLDYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAAN 223
NP+++ LW LE R N ++ + A K PM + ID+ P+R + I AN
Sbjct: 209 NPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDAN 267
Query: 222 G 220
G
Sbjct: 268 G 268
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 65.3 bits (152), Expect = 4e-11
Identities = 35/99 (35%), Positives = 51/99 (51%)
Frame = -1
Query: 516 FQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVLESTARSKRHYN 337
FQQ++ P H + +SW + + DWPS SPDLNP+++ LW LE R N
Sbjct: 244 FQQDNDPKHTSLHVRSWFQRR---HVHLLDWPSQSPDLNPIEH-LWEELERRLGGIRASN 299
Query: 336 LESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANG 220
++ + A K PM + ID+ P+R + I ANG
Sbjct: 300 ADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVIDANG 338
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 64.9 bits (151), Expect = 6e-11
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = -1
Query: 576 ILEKVVKP--LNNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDL 403
ILE ++P L N + + FQQ++ P H + +SW + + DWPS SPDL
Sbjct: 196 ILETTMRPWALQNV---GRGFVFQQDNDPKHTSLHVRSWFQRRRVHLL---DWPSQSPDL 249
Query: 402 NPLDYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAAN 223
NP+++ LW LE R N ++ + A K PM + ID+ P+R + I AN
Sbjct: 250 NPIEH-LWEELERRLGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAFIDAN 308
Query: 222 G 220
G
Sbjct: 309 G 309
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = -1
Query: 537 FNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVLEST- 361
++ +++ FQQ++A H + ST+ + + + + DWP+ SPDLNP++ +LW +L
Sbjct: 221 YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIV 276
Query: 360 -ARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANGD 217
A++K + + SLKQ + A K+ P ++++ + + RL E I G+
Sbjct: 277 YAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEIIRTQGN 325
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = -1
Query: 537 FNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVLEST- 361
++ +++ FQQ++A H + ST+ + + + + DWP+ SPDLNP++ +LW +L
Sbjct: 221 YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIV 276
Query: 360 -ARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANGD 217
A++K + + SLKQ + A K+ P ++++ + + RL E I G+
Sbjct: 277 YAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEIIRTQGN 325
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 60.9 bits (141), Expect = 9e-10
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = -1
Query: 537 FNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVLEST- 361
++ +++ FQQ++A H + ST+ + + + + DWP+ SPDLNP++ +LW +L
Sbjct: 351 YSRKDFRFQQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIV 406
Query: 360 -ARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANGD 217
A++K + + SLKQ + A K+ P ++++ + + RL E I G+
Sbjct: 407 YAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFENIRTQGN 455
>U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical
protein K10B3.2 protein.
Length = 141
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = -1
Query: 516 FQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPLDYDLWSVLEST--ARSKRH 343
F Q++A H + ST+ + + + + DWP+ SPDLNP++ +LW +L A++K +
Sbjct: 40 FCQDNATIHVSNSTRDYFKLKKINLL---DWPARSPDLNPIE-NLWGILVRIVYAQNKTY 95
Query: 342 YNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANGD 217
+ SLKQ + A K+ P ++++ + + RL E I G+
Sbjct: 96 PTVASLKQGILDAWKSIPDNQLKSLVRSMEDRLFEIIRTQGN 137
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 34.3 bits (75), Expect = 0.091
Identities = 29/120 (24%), Positives = 53/120 (44%)
Frame = -1
Query: 573 LEKVVKPLNNTKFNNQEWSFQQESAPGHKARSTQSWLETNVSDFIRAEDWPSSSPDLNPL 394
LEKVV + + ++A H A T+ L+T + + P SPDL P
Sbjct: 192 LEKVVHAHQLHRPRGSKLLLLHDNARPHTALKTRQKLQTLGIEVL---PHPPYSPDLAPT 248
Query: 393 DYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKECIAANGDH 214
DY L+ L++ ++ ++ ++++ + + E I P R +E I NG++
Sbjct: 249 DYHLFRSLQNHLAGQKFHDRKAVETWLDDFFASKSQEFYAEGIAQLPLRWQEVIDTNGEY 308
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -1
Query: 423 PSSSPDLNPLDYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRL 244
P SPDL P DY L+ L R K+ + E LK + + + I P +
Sbjct: 267 PPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRSPDFFSRGIMMLPSKW 326
Query: 243 KECIAANGDH 214
++ + NG++
Sbjct: 327 QQVVDTNGEY 336
>Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical
protein H12I19.1 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 214 LRISFLYFKLFYIYVLN*--HTVKVINVICNRIFFSLVSVFMARLGIYIIGW 65
L I L F+ F +Y L T+++I +R F S ++F + +YII W
Sbjct: 123 LLIIVLAFERFLLYFLKSTERTLQIIQTFIHRHFNSFYAIFAIKDALYIISW 174
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -1
Query: 423 PSSSPDLNPLDYDLWSVLESTARSKRHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRL 244
P SPDL P DY L+ L R K+ + E LK + + + I P +
Sbjct: 242 PPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRSPDFFSRGIMMLPSKW 301
Query: 243 KECIAANG 220
++ + NG
Sbjct: 302 QQVVDTNG 309
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 348 RHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
+H S +S+ A KN ++ V+ S+D W R+KE
Sbjct: 114 KHLTFNSNPESIDAATKN--VQNVKQSLDTWRDRIKE 148
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 348 RHYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
+H S +S+ A KN ++ V+ S+D W R+KE
Sbjct: 114 KHLTFNSNPESIDAATKN--VQNVKQSLDTWRDRIKE 148
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 345 HYNLESLKQSVRLAVKNFPMERVRASIDNWPQRLKE 238
H S +S+ A KN ++ V+ S+D+W R+KE
Sbjct: 1396 HLTFNSNPESIDAATKN--VQNVKQSLDSWRDRIKE 1429
>Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical
protein Y70C5C.4 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 63 PQPIMYIPSLAINTETREKKILLQITFITFTVC 161
P I+Y P L + TE R LL + ++ FT C
Sbjct: 177 PASIVYSPDLYLLTENRMTTALLLLGYMAFTSC 209
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 423 PSSSPDLNPLDYDLWSVLESTARSKRHYNLESLK 322
P SPDL P DY L+ L R K+ + E LK
Sbjct: 267 PPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLK 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,863,665
Number of Sequences: 27780
Number of extensions: 330775
Number of successful extensions: 848
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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