Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h22
         (689 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB199796-1|BAF43710.1|  675|Homo sapiens hypothetical protein pr...    32   1.7  

>AB199796-1|BAF43710.1|  675|Homo sapiens hypothetical protein
           protein.
          Length = 675

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
 Frame = +3

Query: 309 RFPYYVKEI--RGVADGANVPFYQLFLLQMDDLIGTINDNHVPRNDTGGCSSV---AFKN 473
           R+P  +++I    V D +  P  Q  +  + D+   IN+  + +      + V     + 
Sbjct: 174 RYPLLLQKILENTVPDASAYPVLQRAVSALQDVNTNINEYKMRKEVASKYTKVEQLTLRE 233

Query: 474 PQHTILGHTEDAFTETLNHFYIMSAHIIPTPEDREHGAVEERFS--SLC 614
               I  HT    T  L+      A +IP  ED+E   +EERF   SLC
Sbjct: 234 RLARINTHTLSKKTTRLSQLLKQEAGLIPRTEDKEFDDLEERFQWVSLC 282


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,966,034
Number of Sequences: 237096
Number of extensions: 2508702
Number of successful extensions: 5236
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5235
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)