Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte2h22
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 35 0.048
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical p... 29 3.1
Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical ... 29 4.1
AC006675-10|AAK84551.2| 280|Caenorhabditis elegans Serpentine r... 29 4.1
Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 28 5.5
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 28 5.5
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41553-6|AAO91696.1| 297|Caenorhabditis elegans Hypothetical pr... 27 9.6
U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical pr... 27 9.6
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 27 9.6
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 27 9.6
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 27 9.6
AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 27 9.6
>Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical
protein F14F8.13 protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.048
Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = -1
Query: 146 YVYNRDRMASPELYLT--YCRTIQFSHYFFFIILVLIYSVV 30
YV+N +R +L + +CR ++FS++ F I++VL++ ++
Sbjct: 38 YVHNLNRHREKDLLIVQLFCRMVKFSYFIFIIVVVLLFLIM 78
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 684 AC*WKTPFRFHCSPWCTRACDQRSIKTRTVPLLPRAPCLRE-LE*CAPT 541
+C +TP C P C + C Q+ ++T+ + + C ++ ++ CAPT
Sbjct: 140 SCVVQTPAAVQCVPQCQQQCQQQCVQTQPIQQC-QPQCQQQCVQQCAPT 187
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 684 AC*WKTPFRFHCSPWCTRACDQRSIKTRTVPLLPRAPCLRE-LE*CAPT 541
+C +TP C P C + C Q+ ++T+ + + C ++ ++ CAPT
Sbjct: 140 SCVVQTPAPVQCVPQCQQQCQQQCVQTQPIQQC-QPQCQQQCVQQCAPT 187
>Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical
protein C31A11.7 protein.
Length = 706
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 602 EPFLYCPVLPVFGSWND--VRRHNVEVI*GFGKCILCVSKYSMLWVLEG 462
+P L +L F W + V E GF KC+ C+ SMLWV+ G
Sbjct: 236 QPNLIMKMLLTFSLWTNAGVLLSVKEQKPGFIKCLDCIRFLSMLWVVTG 284
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 558 PTPEDREHGAVEERFSSLCYAGHMPGYTMGYNENGMVFSIN 680
P PE RE V++R + YAG PG N + ++ IN
Sbjct: 248 PAPEGREFNIVDDRTINEKYAGLNPGVEFISNVDRLISDIN 288
>Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 707
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 521 GFGKCILCVSKYSMLWVLEG 462
GF KC+ C+ SMLWV+ G
Sbjct: 268 GFIKCLDCIRFLSMLWVVSG 287
>Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical
protein F28G4.5 protein.
Length = 720
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 521 GFGKCILCVSKYSMLWVLEG 462
GF KC+ C+ SMLWV+ G
Sbjct: 250 GFIKCLDCIRFVSMLWVVAG 269
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 521 GFGKCILCVSKYSMLWVLEG 462
GF KC+ C+ SMLWV+ G
Sbjct: 258 GFIKCLDCIRFLSMLWVVTG 277
>AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical
protein Y46C8AR.1 protein.
Length = 469
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 534 YIMSAHIIPTPEDREHGAVEERFSSLCYAGHMPGYTMGYNE 656
Y +S + PED ++ + FSS + H+P YT+G+ E
Sbjct: 212 YAVSRFDLRQPEDIQYFSDYSLFSSYV-SSHLPDYTLGFEE 251
>AC006675-10|AAK84551.2| 280|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 57 protein.
Length = 280
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 116 PELYLTYCRTIQFSHYFFFIILVLIYSVV 30
P+L L YCR + + F ++L +YS+V
Sbjct: 40 PDLKLIYCRFVAEIFFHFVVVLNKLYSIV 68
>Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 521 GFGKCILCVSKYSMLWVLEG 462
GF KC+ C+ SMLW++ G
Sbjct: 258 GFIKCLDCIRFLSMLWIVTG 277
>Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 521 GFGKCILCVSKYSMLWVLEG 462
GF KC+ C+ SMLW++ G
Sbjct: 258 GFIKCLDCIRFLSMLWIVTG 277
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 148 EAPIMKSASMWVAHSPPSSRASYQITLIYVTLSANTKLILAGMRTIRPWLTWRSDSL 318
E P+M++ WVAH PS R L +N +L L G + + WR+D +
Sbjct: 231 EKPVMQAVLNWVAHEEPSRRP------FLAELMSNVRLPLLGDDYL--FEKWRNDEM 279
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 148 EAPIMKSASMWVAHSPPSSRASYQITLIYVTLSANTKLILAGMRTIRPWLTWRSDSL 318
E P+M++ WVAH PS R L +N +L L G + + WR+D +
Sbjct: 231 EKPVMQAVLNWVAHEEPSRRP------FLAELMSNVRLPLLGDDYL--FEKWRNDEM 279
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 459 VAFKNPQHTILGHTEDAFTETLNHFYIMSAHI 554
++FK Q +L ED +ET+ F IMSA I
Sbjct: 265 LSFKKKQFQVLVANEDGVSETIMIFNIMSAKI 296
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 459 VAFKNPQHTILGHTEDAFTETLNHFYIMSAHI 554
++FK Q +L ED +ET+ F IMSA I
Sbjct: 265 LSFKKKQFQVLVANEDGVSETIMIFNIMSAKI 296
>U41553-6|AAO91696.1| 297|Caenorhabditis elegans Hypothetical
protein ZK1193.5c protein.
Length = 297
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 368 ERNVSSISNTPDLLNVVRESLLHVSQGLI 282
E + SI+++PD+ N +RESL S L+
Sbjct: 158 EPEIDSIASSPDMANSMRESLSSTSPKLL 186
>U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical
protein ZK1193.5a protein.
Length = 468
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 368 ERNVSSISNTPDLLNVVRESLLHVSQGLI 282
E + SI+++PD+ N +RESL S L+
Sbjct: 329 EPEIDSIASSPDMANSMRESLSSTSPKLL 357
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 383 EE*LIERNVSSISNTPDLLNVVRESLLHVSQGLI 282
EE + +S+S++P NVV+ +L HVS +I
Sbjct: 947 EEVIKTEKKNSVSHSPSSSNVVKNNLRHVSTNVI 980
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 383 EE*LIERNVSSISNTPDLLNVVRESLLHVSQGLI 282
EE + +S+S++P NVV+ +L HVS +I
Sbjct: 950 EEVIKTEKKNSVSHSPSSSNVVKNNLRHVSTNVI 983
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chloride
channel CLH-4b protein.
Length = 1084
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 383 EE*LIERNVSSISNTPDLLNVVRESLLHVSQGLI 282
EE + +S+S++P NVV+ +L HVS +I
Sbjct: 949 EEVIKTEKKNSVSHSPSSSNVVKNNLRHVSTNVI 982
>AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 978
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 383 EE*LIERNVSSISNTPDLLNVVRESLLHVSQGLI 282
EE + +S+S++P NVV+ +L HVS +I
Sbjct: 875 EEVIKTEKKNSVSHSPSSSNVVKNNLRHVSTNVI 908
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,895,572
Number of Sequences: 27780
Number of extensions: 378963
Number of successful extensions: 1034
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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