Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h22
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      26   0.29 
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    25   0.68 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.7  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.4  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 636 TRACDQRSIKTRTVPLLPRAPCLREL 559
           T ACD RS+K   V L   +P  REL
Sbjct: 35  TLACDGRSLKAHRVVLSACSPYFREL 60


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 101 TYCRTIQFSHYFFFIILVLIYSVVSA 24
           ++C TI F+ +  FI+LV I   V A
Sbjct: 77  SHCMTITFASFLLFILLVQIAVAVYA 102


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -1

Query: 344 NTPDLLNVVRESLLHVSQGLIVRIPASISFVFALKVT*ISVI*YEALDD 198
           NT  +L VVRE  LH +    V   A    +  L V   S I YE L++
Sbjct: 63  NTLVILAVVRERYLHTATNYFVTSLAFADCLVGLVVMPFSAI-YEVLEN 110


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = +3

Query: 477 QHTILGHTEDAFTET--LNHFYIMSAHIIP 560
           +H +     + FTE   LNHFY M  H  P
Sbjct: 211 KHNVPEQRLNYFTEDVGLNHFYFMLNHNYP 240


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 89 TIQFSHYFFFIILVLIYS 36
          +I F H  F I+++ IYS
Sbjct: 6  SIMFIHSIFLILIIFIYS 23


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = +3

Query: 477 QHTILGHTEDAFTET--LNHFYIMSAHIIP 560
           +H +     + FTE   LNHFY M  H  P
Sbjct: 211 KHNVPEQRLNYFTEDVGLNHFYFMLNHNYP 240


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
          protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 89 TIQFSHYFFFIILVLIYS 36
          +I F H  F I+++ IYS
Sbjct: 6  SIMFIHSIFLILIIFIYS 23


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 198 WRRMCDPHRSRLHNGSLLRI*QG 130
           W+R+   H   +H   +LRI +G
Sbjct: 88  WQRLTSLHELHVHGCKVLRIPEG 110


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 155 GASYVYNRDRMASPELYLTYCRTI 84
           G   VYN D +   + + TY  T+
Sbjct: 379 GIGVVYNGDEIGMEDRWFTYQETV 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,071
Number of Sequences: 438
Number of extensions: 4988
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)