Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h14
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro...    29   4.8  
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati...    29   4.8  
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,...    29   4.8  
AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,...    29   4.8  
AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,...    29   4.8  
AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA...    29   6.3  

>DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A protein.
          Length = 3790

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 343  LKIQAFYNITPRLMP--SSPHYIVEEEFSVNPWAMLIATIFLNKTSGKTARPHMSVFFDE 516
            L+ +A Y +   L+   +SP+ IV EE  V      I TI  +KT  +   PH  V  D 
Sbjct: 1183 LQAKATYEVIHELVRHITSPNTIVREESMV--LLKHIGTI-QSKTVSEVMDPHKDVLADI 1239

Query: 517  YPTPYHVLSDNPSSIE 564
             P   H+L   P++ +
Sbjct: 1240 IPPKKHLLRHQPANAQ 1255


>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
            transformation/transcription domain-associated protein
            protein.
          Length = 3803

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 343  LKIQAFYNITPRLMP--SSPHYIVEEEFSVNPWAMLIATIFLNKTSGKTARPHMSVFFDE 516
            L+ +A Y +   L+   +SP+ IV EE  V      I TI  +KT  +   PH  V  D 
Sbjct: 1245 LQAKATYEVIHELVRHITSPNTIVREESMV--LLKHIGTI-QSKTVSEVMDPHKDVLADI 1301

Query: 517  YPTPYHVLSDNPSSIE 564
             P   H+L   P++ +
Sbjct: 1302 IPPKKHLLRHQPANAQ 1317


>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
            isoform A protein.
          Length = 3805

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 343  LKIQAFYNITPRLMP--SSPHYIVEEEFSVNPWAMLIATIFLNKTSGKTARPHMSVFFDE 516
            L+ +A Y +   L+   +SP+ IV EE  V      I TI  +KT  +   PH  V  D 
Sbjct: 1247 LQAKATYEVIHELVRHITSPNTIVREESMV--LLKHIGTI-QSKTVSEVMDPHKDVLADI 1303

Query: 517  YPTPYHVLSDNPSSIE 564
             P   H+L   P++ +
Sbjct: 1304 IPPKKHLLRHQPANAQ 1319


>AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,
            isoform C protein.
          Length = 3628

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 343  LKIQAFYNITPRLMP--SSPHYIVEEEFSVNPWAMLIATIFLNKTSGKTARPHMSVFFDE 516
            L+ +A Y +   L+   +SP+ IV EE  V      I TI  +KT  +   PH  V  D 
Sbjct: 1091 LQAKATYEVIHELVRHITSPNTIVREESMV--LLKHIGTI-QSKTVSEVMDPHKDVLADI 1147

Query: 517  YPTPYHVLSDNPSSIE 564
             P   H+L   P++ +
Sbjct: 1148 IPPKKHLLRHQPANAQ 1163


>AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,
            isoform B protein.
          Length = 3400

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +1

Query: 343  LKIQAFYNITPRLMP--SSPHYIVEEEFSVNPWAMLIATIFLNKTSGKTARPHMSVFFDE 516
            L+ +A Y +   L+   +SP+ IV EE  V      I TI  +KT  +   PH  V  D 
Sbjct: 921  LQAKATYEVIHELVRHITSPNTIVREESMV--LLKHIGTI-QSKTVSEVMDPHKDVLADI 977

Query: 517  YPTPYHVLSDNPSSIE 564
             P   H+L   P++ +
Sbjct: 978  IPPKKHLLRHQPANAQ 993


>AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA
           protein.
          Length = 2396

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 301 YLHLQWNFDLDPVRNLNFAHQKQ 233
           YLHL +NF+L PV+ L    +K+
Sbjct: 575 YLHLDYNFNLKPVKTLTTKERKK 597


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,796,019
Number of Sequences: 53049
Number of extensions: 697833
Number of successful extensions: 1205
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)