Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte2h13
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    28   0.32 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    27   0.56 
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   5.2  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -1

Query: 312 FLAFFIQTFLLNIWIELYRLHLISKTISYPRLLVSRNSTLNYYHYIFALRLFK 154
           FL   +   ++NI    Y L +I   +    LLV+ NS++N++ Y+     FK
Sbjct: 320 FLLCNLPAMMINIVEAFYSL-IIEYMVKVSNLLVTINSSVNFFIYVIFGEKFK 371


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = -3

Query: 445  IKFRKSKKFYISILNLKTLTEC*ILL*IKFVYRLSVSKWTSYFG 314
            +KF +  + Y  +L+L  L    +   ++FV++L+  ++ +YFG
Sbjct: 1194 MKFYRQPEIYTEVLDLLNLIFTAVFA-LEFVFKLAAFRFKNYFG 1236


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 236 RSRILVFWCPETALSIITIIYLLFAFLNKTL 144
           RSR+  FW  ET+  ++ I  +L   +++T+
Sbjct: 264 RSRMARFWSFETSTDMLPITLVLTQLIDETV 294


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,051
Number of Sequences: 2352
Number of extensions: 12446
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)